RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 C12orf50Q8NA57 414 aaPredicted RBP13.35□□□□□ -0.27
CCDC57-208ENST00000475635 ZSWIM2Q8NEG5 633 aa13.35□□□□□ -0.27
CCDC57-208ENST00000475635 LEO1Q8WVC0 666 aaPredicted RBP13.35□□□□□ -0.27
CCDC57-208ENST00000475635 DDX1Q92499 740 aaKnown RBP13.35□□□□□ -0.27
CCDC57-208ENST00000475635 LOXL4Q96JB6 756 aa13.35□□□□□ -0.27
CCDC57-208ENST00000475635 ACBD6Q9BR61 282 aa13.35□□□□□ -0.27
CCDC57-208ENST00000475635 FBRSL1Q9HCM7 1045 aaKnown RBP13.35□□□□□ -0.27
CCDC57-208ENST00000475635 ABCB6Q9NP58 842 aa13.35□□□□□ -0.27
CCDC57-208ENST00000475635 POLR3BQ9NW08 1133 aaPredicted RBP13.35□□□□□ -0.27
CCDC57-208ENST00000475635 SEL1LQ9UBV2 794 aa13.35□□□□□ -0.27
CCDC57-208ENST00000475635 STK17AQ9UEE5 414 aa13.35□□□□□ -0.27
CCDC57-208ENST00000475635 CCDC39Q9UFE4 941 aa13.35□□□□□ -0.27
CCDC57-208ENST00000475635 L1RE1Q9UN81 338 aa13.35□□□□□ -0.27
CCDC57-208ENST00000475635 ASCC3Q8N3C0 2202 aaKnown RBP13.35□□□□□ -0.27
CCDC57-208ENST00000475635 CFAP47Q6ZTR5 3102 aa13.34□□□□□ -0.27
CCDC57-208ENST00000475635 MYMKA6NI61 221 aa13.34□□□□□ -0.27
CCDC57-208ENST00000475635 NOL4O94818 638 aa13.34□□□□□ -0.27
CCDC57-208ENST00000475635 GCNT3O95395 438 aa13.34□□□□□ -0.27
CCDC57-208ENST00000475635 ZNF806P0C7X5 589 aa13.34□□□□□ -0.27
CCDC57-208ENST00000475635 GAP43P17677 238 aa13.34□□□□□ -0.27
CCDC57-208ENST00000475635 DRD1P21728 446 aa13.34□□□□□ -0.27
CCDC57-208ENST00000475635 GALK1P51570 392 aa13.34□□□□□ -0.27
CCDC57-208ENST00000475635 MYL7Q01449 175 aa13.34□□□□□ -0.27
CCDC57-208ENST00000475635 MTF1Q14872 753 aa13.34□□□□□ -0.27
CCDC57-208ENST00000475635 L1TD1Q5T7N2 865 aaKnown RBP13.34□□□□□ -0.27
CCDC57-208ENST00000475635 NAIF1Q69YI7 327 aaPredicted RBP13.34□□□□□ -0.27
CCDC57-208ENST00000475635 SCARA3Q6AZY7 606 aa13.34□□□□□ -0.27
CCDC57-208ENST00000475635 TMEM86AQ8N2M4 240 aa13.34□□□□□ -0.27
CCDC57-208ENST00000475635 TTC16Q8NEE8 873 aa13.34□□□□□ -0.27
CCDC57-208ENST00000475635 CACTINQ8WUQ7 758 aaKnown RBP13.34□□□□□ -0.27
CCDC57-208ENST00000475635 TRMT2BQ96GJ1 504 aaKnown RBP13.34□□□□□ -0.27
CCDC57-208ENST00000475635 FAM84AQ96KN4 292 aa13.34□□□□□ -0.27
CCDC57-208ENST00000475635 ACCSQ96QU6 501 aa13.34□□□□□ -0.27
CCDC57-208ENST00000475635 PKMYT1Q99640 499 aa13.34□□□□□ -0.27
CCDC57-208ENST00000475635 P2RY13Q9BPV8 354 aa13.34□□□□□ -0.27
CCDC57-208ENST00000475635 TRPC7Q9HCX4 862 aa13.34□□□□□ -0.27
CCDC57-208ENST00000475635 RBAKQ9NYW8 714 aaPredicted RBP13.34□□□□□ -0.27
CCDC57-208ENST00000475635 UXTQ9UBK9 157 aaPredicted RBP13.34□□□□□ -0.27
CCDC57-208ENST00000475635 CLIC4Q9Y696 253 aa13.34□□□□□ -0.27
CCDC57-208ENST00000475635 TRAV19A0A0A6YYK7 116 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 VPS37CA5D8V6 355 aaPredicted RBP13.33□□□□□ -0.28
CCDC57-208ENST00000475635 GOLGA8IPA6NC78 632 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 GOLGA8JA6NMD2 632 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 AKAP3O75969 853 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 LDHAP00338 332 aaKnown RBP13.33□□□□□ -0.28
CCDC57-208ENST00000475635 KRT19P08727 400 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 GJA4P35212 333 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 CASP5P51878 434 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 LIMK1P53667 647 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 FAM160A1Q05DH4 1040 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 CCDC142Q17RM4 750 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 RRAGBQ5VZM2 374 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 SV2BQ7L1I2 683 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 OSTM1Q86WC4 334 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 SYCP3Q8IZU3 236 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 CPA6Q8N4T0 437 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 CAMKK1Q8N5S9 505 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 CSGALNACT2Q8N6G5 542 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 LRRC52Q8N7C0 313 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 RPLP0P6Q8NHW5 317 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 CXorf38Q8TB03 319 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 NOC3LQ8WTT2 800 aaKnown RBP13.33□□□□□ -0.28
CCDC57-208ENST00000475635 OSCP1Q8WVF1 389 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 EXOC4Q96A65 974 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 DNAJC19Q96DA6 116 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 MYRFLQ96LU7 910 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 HHIPQ96QV1 700 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 SLC22A12Q96S37 553 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 CYP2S1Q96SQ9 504 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 TMEM206Q9H813 350 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 ECT2Q9H8V3 914 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 RXFP3Q9NSD7 469 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 DUS2Q9NX74 493 aaKnown RBP13.33□□□□□ -0.28
CCDC57-208ENST00000475635 FBXO2Q9UK22 296 aaPredicted RBP13.33□□□□□ -0.28
CCDC57-208ENST00000475635 GTF3C4Q9UKN8 822 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 ITGA11Q9UKX5 1188 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 SNX9Q9Y5X1 595 aa13.33□□□□□ -0.28
CCDC57-208ENST00000475635 TNRC6BQ9UPQ9 1833 aaKnown RBP13.32□□□□□ -0.28
CCDC57-208ENST00000475635 PCNX2A6NKB5 2137 aa13.32□□□□□ -0.28
CCDC57-208ENST00000475635 HCRTO43612 131 aa13.32□□□□□ -0.28
CCDC57-208ENST00000475635 CKMP06732 381 aa13.32□□□□□ -0.28
CCDC57-208ENST00000475635 USP17L7P0C7H9 530 aa13.32□□□□□ -0.28
CCDC57-208ENST00000475635 IDEP14735 1019 aa13.32□□□□□ -0.28
CCDC57-208ENST00000475635 GARTP22102 1010 aa13.32□□□□□ -0.28
CCDC57-208ENST00000475635 TXLNAP40222 546 aa13.32□□□□□ -0.28
CCDC57-208ENST00000475635 IFNAR2P48551 515 aa13.32□□□□□ -0.28
CCDC57-208ENST00000475635 LHX1P48742 406 aa13.32□□□□□ -0.28
CCDC57-208ENST00000475635 RBP5P82980 135 aa13.32□□□□□ -0.28
CCDC57-208ENST00000475635 ZNF77Q15935 545 aa13.32□□□□□ -0.28
CCDC57-208ENST00000475635 ST3GAL2Q16842 350 aa13.32□□□□□ -0.28
CCDC57-208ENST00000475635 CFAP221Q4G0U5 840 aa13.32□□□□□ -0.28
CCDC57-208ENST00000475635 FBXO43Q4G163 708 aa13.32□□□□□ -0.28
CCDC57-208ENST00000475635 PLA2G2CQ5R387 149 aa13.32□□□□□ -0.28
CCDC57-208ENST00000475635 SPATA2LQ8IUW3 424 aaPredicted RBP13.32□□□□□ -0.28
CCDC57-208ENST00000475635 SCN4BQ8IWT1 228 aa13.32□□□□□ -0.28
CCDC57-208ENST00000475635 ADGRF2Q8IZF7 708 aa13.32□□□□□ -0.28
CCDC57-208ENST00000475635 TOP6BLQ8N6T0 577 aa13.32□□□□□ -0.28
CCDC57-208ENST00000475635 ATP2A3Q93084 1043 aa13.32□□□□□ -0.28
CCDC57-208ENST00000475635 CHAMP1Q96JM3 812 aa13.32□□□□□ -0.28
CCDC57-208ENST00000475635 ZC3H10Q96K80 434 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms