RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 FAM160A1Q05DH4 1040 aa17.15■□□□□ 0.34
ITGB1-211ENST00000475184 DCP1BQ8IZD4 617 aaKnown RBP17.15■□□□□ 0.34
ITGB1-211ENST00000475184 KCTD17Q8N5Z5 321 aa17.15■□□□□ 0.34
ITGB1-211ENST00000475184 TTC16Q8NEE8 873 aa17.15■□□□□ 0.34
ITGB1-211ENST00000475184 OSCP1Q8WVF1 389 aa17.15■□□□□ 0.34
ITGB1-211ENST00000475184 ZCCHC14Q8WYQ9 949 aaKnown RBP17.15■□□□□ 0.34
ITGB1-211ENST00000475184 PLIN2Q99541 437 aa17.15■□□□□ 0.34
ITGB1-211ENST00000475184 CCSER1Q9C0I3 900 aa17.15■□□□□ 0.34
ITGB1-211ENST00000475184 WNT6Q9Y6F9 365 aa17.15■□□□□ 0.34
ITGB1-211ENST00000475184 ACACAQ13085 2346 aa17.15■□□□□ 0.34
ITGB1-211ENST00000475184 LAMA5O15230 3695 aa17.15■□□□□ 0.34
ITGB1-211ENST00000475184 GCN1Q92616 2671 aaKnown RBP17.14■□□□□ 0.34
ITGB1-211ENST00000475184 K7ENM7 598 aa17.14■□□□□ 0.33
ITGB1-211ENST00000475184 TADA3O75528 432 aa17.14■□□□□ 0.33
ITGB1-211ENST00000475184 BCKDHBP21953 392 aa17.14■□□□□ 0.33
ITGB1-211ENST00000475184 SCP2P22307 547 aa17.14■□□□□ 0.33
ITGB1-211ENST00000475184 IFNAR2P48551 515 aa17.14■□□□□ 0.33
ITGB1-211ENST00000475184 GPR15P49685 360 aa17.14■□□□□ 0.33
ITGB1-211ENST00000475184 IRX4P78413 519 aa17.14■□□□□ 0.33
ITGB1-211ENST00000475184 HMGN5P82970 282 aaKnown RBP17.14■□□□□ 0.33
ITGB1-211ENST00000475184 USP4Q13107 963 aa17.14■□□□□ 0.33
ITGB1-211ENST00000475184 ZNF77Q15935 545 aa17.14■□□□□ 0.33
ITGB1-211ENST00000475184 EML3Q32P44 896 aa17.14■□□□□ 0.33
ITGB1-211ENST00000475184 UAP1L1Q3KQV9 507 aa17.14■□□□□ 0.33
ITGB1-211ENST00000475184 ARSHQ5FYA8 562 aa17.14■□□□□ 0.33
ITGB1-211ENST00000475184 ANO7Q6IWH7 933 aa17.14■□□□□ 0.33
ITGB1-211ENST00000475184 SLC39A4Q6P5W5 647 aa17.14■□□□□ 0.33
ITGB1-211ENST00000475184 DEFB124Q8NES8 71 aa17.14■□□□□ 0.33
ITGB1-211ENST00000475184 CCDC26Q8TAB7 109 aa17.14■□□□□ 0.33
ITGB1-211ENST00000475184 ASB7Q9H672 318 aa17.14■□□□□ 0.33
ITGB1-211ENST00000475184 TMEM206Q9H813 350 aa17.14■□□□□ 0.33
ITGB1-211ENST00000475184 TMLHEQ9NVH6 421 aa17.14■□□□□ 0.33
ITGB1-211ENST00000475184 ODF2LQ9ULJ1 636 aa17.14■□□□□ 0.33
ITGB1-211ENST00000475184 C2CD2Q9Y426 696 aa17.14■□□□□ 0.33
ITGB1-211ENST00000475184 LOC400499M0QZD8 3231 aa17.14■□□□□ 0.33
ITGB1-211ENST00000475184 IGSF10Q6WRI0 2623 aa17.14■□□□□ 0.33
ITGB1-211ENST00000475184 PRPF40AO75400 957 aaKnown RBP17.13■□□□□ 0.33
ITGB1-211ENST00000475184 CKMP06732 381 aa17.13■□□□□ 0.33
ITGB1-211ENST00000475184 DHPSP49366 369 aaPredicted RBP17.13■□□□□ 0.33
ITGB1-211ENST00000475184 TSPY1Q01534 308 aa17.13■□□□□ 0.33
ITGB1-211ENST00000475184 SDHAF4Q5VUM1 108 aa17.13■□□□□ 0.33
ITGB1-211ENST00000475184 RASSF3Q86WH2 238 aa17.13■□□□□ 0.33
ITGB1-211ENST00000475184 FAM184AQ8NB25 1140 aa17.13■□□□□ 0.33
ITGB1-211ENST00000475184 CDK5RAP3Q96JB5 506 aa17.13■□□□□ 0.33
ITGB1-211ENST00000475184 CNOT6LQ96LI5 555 aaKnown RBP17.13■□□□□ 0.33
ITGB1-211ENST00000475184 REEP2Q9BRK0 252 aa17.13■□□□□ 0.33
ITGB1-211ENST00000475184 PI4K2AQ9BTU6 479 aa17.13■□□□□ 0.33
ITGB1-211ENST00000475184 TRPC7Q9HCX4 862 aa17.13■□□□□ 0.33
ITGB1-211ENST00000475184 DPP3Q9NY33 737 aa17.13■□□□□ 0.33
ITGB1-211ENST00000475184 UXTQ9UBK9 157 aaPredicted RBP17.13■□□□□ 0.33
ITGB1-211ENST00000475184 LIMCH1Q9UPQ0 1083 aa17.13■□□□□ 0.33
ITGB1-211ENST00000475184 TRAV19A0A0A6YYK7 116 aa17.12■□□□□ 0.33
ITGB1-211ENST00000475184 USP17L7P0C7H9 530 aa17.12■□□□□ 0.33
ITGB1-211ENST00000475184 ACOT2P49753 483 aa17.12■□□□□ 0.33
ITGB1-211ENST00000475184 NR1H3Q13133 447 aa17.12■□□□□ 0.33
ITGB1-211ENST00000475184 NFE2Q16621 373 aaPredicted RBP17.12■□□□□ 0.33
ITGB1-211ENST00000475184 SV2CQ496J9 727 aa17.12■□□□□ 0.33
ITGB1-211ENST00000475184 C2orf27AQ580R0 203 aa17.12■□□□□ 0.33
ITGB1-211ENST00000475184 KIAA1211LQ6NV74 962 aa17.12■□□□□ 0.33
ITGB1-211ENST00000475184 MDGA1Q8NFP4 955 aa17.12■□□□□ 0.33
ITGB1-211ENST00000475184 USP33Q8TEY7 942 aa17.12■□□□□ 0.33
ITGB1-211ENST00000475184 PIGKQ92643 395 aa17.12■□□□□ 0.33
ITGB1-211ENST00000475184 TRMT2BQ96GJ1 504 aaKnown RBP17.12■□□□□ 0.33
ITGB1-211ENST00000475184 SLC22A12Q96S37 553 aa17.12■□□□□ 0.33
ITGB1-211ENST00000475184 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.12■□□□□ 0.33
ITGB1-211ENST00000475184 EVLQ9UI08 416 aaPredicted RBP17.12■□□□□ 0.33
ITGB1-211ENST00000475184 NEUROG3Q9Y4Z2 214 aa17.12■□□□□ 0.33
ITGB1-211ENST00000475184 KPNA7A9QM74 516 aa17.11■□□□□ 0.33
ITGB1-211ENST00000475184 NOL4O94818 638 aa17.11■□□□□ 0.33
ITGB1-211ENST00000475184 SEC13P55735 322 aa17.11■□□□□ 0.33
ITGB1-211ENST00000475184 RPL10AP62906 217 aaKnown RBP17.11■□□□□ 0.33
ITGB1-211ENST00000475184 LMAN2Q12907 356 aa17.11■□□□□ 0.33
ITGB1-211ENST00000475184 DDR2Q16832 855 aa17.11■□□□□ 0.33
ITGB1-211ENST00000475184 TMEM119Q4V9L6 283 aa17.11■□□□□ 0.33
ITGB1-211ENST00000475184 EFCAB13Q8IY85 973 aa17.11■□□□□ 0.33
ITGB1-211ENST00000475184 MYCT1Q8N699 235 aa17.11■□□□□ 0.33
ITGB1-211ENST00000475184 LEO1Q8WVC0 666 aaPredicted RBP17.11■□□□□ 0.33
ITGB1-211ENST00000475184 MYRFLQ96LU7 910 aa17.11■□□□□ 0.33
ITGB1-211ENST00000475184 CYP2S1Q96SQ9 504 aa17.11■□□□□ 0.33
ITGB1-211ENST00000475184 PARVGQ9HBI0 331 aa17.11■□□□□ 0.33
ITGB1-211ENST00000475184 ABCB6Q9NP58 842 aa17.11■□□□□ 0.33
ITGB1-211ENST00000475184 LHX6Q9UPM6 363 aa17.11■□□□□ 0.33
ITGB1-211ENST00000475184 ADAMTS20P59510 1910 aa17.11■□□□□ 0.33
ITGB1-211ENST00000475184 K7EQS6 105 aa17.1■□□□□ 0.33
ITGB1-211ENST00000475184 HYAL3O43820 417 aaPredicted RBP17.1■□□□□ 0.33
ITGB1-211ENST00000475184 FAM13AO94988 1023 aa17.1■□□□□ 0.33
ITGB1-211ENST00000475184 CYP2F1P24903 491 aa17.1■□□□□ 0.33
ITGB1-211ENST00000475184 ZNF131P52739 623 aa17.1■□□□□ 0.33
ITGB1-211ENST00000475184 ATP2C1P98194 919 aaPredicted RBP17.1■□□□□ 0.33
ITGB1-211ENST00000475184 RING1Q06587 406 aa17.1■□□□□ 0.33
ITGB1-211ENST00000475184 TRIM61Q5EBN2 209 aa17.1■□□□□ 0.33
ITGB1-211ENST00000475184 LRSAM1Q6UWE0 723 aa17.1■□□□□ 0.33
ITGB1-211ENST00000475184 GPBP1Q86WP2 473 aa17.1■□□□□ 0.33
ITGB1-211ENST00000475184 SH3RF2Q8TEC5 729 aa17.1■□□□□ 0.33
ITGB1-211ENST00000475184 ZNF560Q96MR9 790 aa17.1■□□□□ 0.33
ITGB1-211ENST00000475184 SLC32A1Q9H598 525 aa17.1■□□□□ 0.33
ITGB1-211ENST00000475184 MMP17Q9ULZ9 603 aa17.1■□□□□ 0.33
ITGB1-211ENST00000475184 SETXQ7Z333 2677 aaKnown RBP17.1■□□□□ 0.33
ITGB1-211ENST00000475184 APC2O95996 2303 aa17.09■□□□□ 0.33
ITGB1-211ENST00000475184 VWA3AA6NCI4 1184 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms