RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 TRIM49BA6NDI0 452 aa12.7□□□□□ -0.38
CLIP2-204ENST00000474962 ITGB3P05106 788 aa12.7□□□□□ -0.38
CLIP2-204ENST00000474962 EPB41P11171 864 aaKnown RBP12.7□□□□□ -0.38
CLIP2-204ENST00000474962 TNNI1P19237 187 aa12.7□□□□□ -0.38
CLIP2-204ENST00000474962 ERCC5P28715 1186 aaPredicted RBP12.7□□□□□ -0.38
CLIP2-204ENST00000474962 POLR2BP30876 1174 aaKnown RBP12.7□□□□□ -0.38
CLIP2-204ENST00000474962 TUFMP49411 452 aaKnown RBP12.7□□□□□ -0.38
CLIP2-204ENST00000474962 CSTF1Q05048 431 aaKnown RBP12.7□□□□□ -0.38
CLIP2-204ENST00000474962 DPCR1Q3MIW9 517 aa12.7□□□□□ -0.38
CLIP2-204ENST00000474962 NT5DC4Q86YG4 428 aa12.7□□□□□ -0.38
CLIP2-204ENST00000474962 CBWD2Q8IUF1 395 aa12.7□□□□□ -0.38
CLIP2-204ENST00000474962 CREBRFQ8IUR6 639 aa12.7□□□□□ -0.38
CLIP2-204ENST00000474962 BRSK2Q8IWQ3 736 aa12.7□□□□□ -0.38
CLIP2-204ENST00000474962 FAM186BQ8IYM0 893 aa12.7□□□□□ -0.38
CLIP2-204ENST00000474962 ZNF687Q8N1G0 1237 aa12.7□□□□□ -0.38
CLIP2-204ENST00000474962 FAM200AQ8TCP9 573 aa12.7□□□□□ -0.38
CLIP2-204ENST00000474962 IRF7Q92985 503 aa12.7□□□□□ -0.38
CLIP2-204ENST00000474962 ANKRD36BP1Q96IX9 119 aa12.7□□□□□ -0.38
CLIP2-204ENST00000474962 GPR88Q9GZN0 384 aa12.7□□□□□ -0.38
CLIP2-204ENST00000474962 DMAC2Q9NW81 257 aa12.7□□□□□ -0.38
CLIP2-204ENST00000474962 HSFX1Q9UBD0 423 aa12.7□□□□□ -0.38
CLIP2-204ENST00000474962 NDRG2Q9UN36 371 aaKnown RBP12.7□□□□□ -0.38
CLIP2-204ENST00000474962 ASB3Q9Y575 518 aa12.7□□□□□ -0.38
CLIP2-204ENST00000474962 ZNF263O14978 683 aa12.69□□□□□ -0.38
CLIP2-204ENST00000474962 TNNC2P02585 160 aa12.69□□□□□ -0.38
CLIP2-204ENST00000474962 TMEM191BP0C7N4 346 aa12.69□□□□□ -0.38
CLIP2-204ENST00000474962 DLATP10515 647 aaKnown RBP12.69□□□□□ -0.38
CLIP2-204ENST00000474962 HAPLN1P10915 354 aaPredicted RBP12.69□□□□□ -0.38
CLIP2-204ENST00000474962 ATF6P18850 670 aa12.69□□□□□ -0.38
CLIP2-204ENST00000474962 GABRR2P28476 465 aa12.69□□□□□ -0.38
CLIP2-204ENST00000474962 TYRO3Q06418 890 aa12.69□□□□□ -0.38
CLIP2-204ENST00000474962 SV2CQ496J9 727 aa12.69□□□□□ -0.38
CLIP2-204ENST00000474962 CCDC40Q4G0X9 1142 aa12.69□□□□□ -0.38
CLIP2-204ENST00000474962 ZCWPW2Q504Y3 356 aa12.69□□□□□ -0.38
CLIP2-204ENST00000474962 GPR158Q5T848 1215 aa12.69□□□□□ -0.38
CLIP2-204ENST00000474962 LMBRD2Q68DH5 695 aaPredicted RBP12.69□□□□□ -0.38
CLIP2-204ENST00000474962 INTS8Q75QN2 995 aaKnown RBP12.69□□□□□ -0.38
CLIP2-204ENST00000474962 PDCL2Q8N4E4 241 aa12.69□□□□□ -0.38
CLIP2-204ENST00000474962 TTC8Q8TAM2 541 aa12.69□□□□□ -0.38
CLIP2-204ENST00000474962 TMEM174Q8WUU8 243 aa12.69□□□□□ -0.38
CLIP2-204ENST00000474962 DNASE1L2Q92874 299 aa12.69□□□□□ -0.38
CLIP2-204ENST00000474962 CCDC127Q96BQ5 260 aa12.69□□□□□ -0.38
CLIP2-204ENST00000474962 ZFYVE19Q96K21 471 aa12.69□□□□□ -0.38
CLIP2-204ENST00000474962 CEP63Q96MT8 703 aa12.69□□□□□ -0.38
CLIP2-204ENST00000474962 SRRTQ9BXP5 876 aaKnown RBP12.69□□□□□ -0.38
CLIP2-204ENST00000474962 IL21Q9HBE4 155 aa12.69□□□□□ -0.38
CLIP2-204ENST00000474962 ABI2Q9NYB9 513 aaPredicted RBP12.69□□□□□ -0.38
CLIP2-204ENST00000474962 SIX4Q9UIU6 781 aa12.69□□□□□ -0.38
CLIP2-204ENST00000474962 GPR179Q6PRD1 2367 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 ARNTLO00327 626 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 MAPK13O15264 365 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 NCAM2O15394 837 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 SLC16A3O15427 465 aaKnown RBP12.68□□□□□ -0.38
CLIP2-204ENST00000474962 LAMTOR5O43504 91 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 HCRTO43612 131 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 CLSTN1O94985 981 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 GNA14O95837 355 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 LMNAP02545 664 aaKnown RBP12.68□□□□□ -0.38
CLIP2-204ENST00000474962 KRT19P08727 400 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 ACAT1P24752 427 aaKnown RBP12.68□□□□□ -0.38
CLIP2-204ENST00000474962 PNPLA4P41247 253 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 CASP4P49662 377 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 GPR15P49685 360 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 PMS1P54277 932 aaKnown RBP12.68□□□□□ -0.38
CLIP2-204ENST00000474962 RBP5P82980 135 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 CYP24A1Q07973 514 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 BFSP1Q12934 665 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 MTAPQ13126 283 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 PSMD6Q15008 389 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 DUOXA2Q1HG44 320 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 SDHAF4Q5VUM1 108 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 FOXR2Q6PJQ5 311 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 TSSK4Q6SA08 328 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 FILIP1Q7Z7B0 1213 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 ITIH5Q86UX2 942 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 FAM114A1Q8IWE2 563 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 DCP1BQ8IZD4 617 aaKnown RBP12.68□□□□□ -0.38
CLIP2-204ENST00000474962 OR5B17Q8NGF7 314 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 DEPDC1BQ8WUY9 529 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 FAM3CQ92520 227 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 EEF2KMTQ96G04 330 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 PI4K2AQ9BTU6 479 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 SLC46A2Q9BY10 475 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 MTMR12Q9C0I1 747 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 SMG9Q9H0W8 520 aaKnown RBP12.68□□□□□ -0.38
CLIP2-204ENST00000474962 SEMA4AQ9H3S1 761 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 LMAN1LQ9HAT1 526 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 METTL14Q9HCE5 456 aaKnown RBP12.68□□□□□ -0.38
CLIP2-204ENST00000474962 TRPV5Q9NQA5 729 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 MAGEC2Q9UBF1 373 aaPredicted RBP12.68□□□□□ -0.38
CLIP2-204ENST00000474962 GTF3C4Q9UKN8 822 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 L1RE1Q9UN81 338 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 MRPS17Q9Y2R5 130 aaKnown RBP12.68□□□□□ -0.38
CLIP2-204ENST00000474962 PIAS3Q9Y6X2 628 aa12.68□□□□□ -0.38
CLIP2-204ENST00000474962 PTPRJQ12913 1337 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 DNAH14Q0VDD8 3507 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 MAN2B1O00754 1011 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 STX10O60499 249 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 HUS1O60921 280 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 PHACTR2O75167 634 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms