RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 HEXIM2Q96MH2 286 aaKnown RBP10.12□□□□□ -0.79
DDX39B-217ENST00000474961 RTP3Q9BQQ7 232 aa10.12□□□□□ -0.79
DDX39B-217ENST00000474961 KCNF1Q9H3M0 494 aa10.12□□□□□ -0.79
DDX39B-217ENST00000474961 DPEP3Q9H4B8 488 aa10.12□□□□□ -0.79
DDX39B-217ENST00000474961 PRDM9Q9NQV7 894 aa10.12□□□□□ -0.79
DDX39B-217ENST00000474961 PUF60Q9UHX1 559 aaKnown RBP10.12□□□□□ -0.79
DDX39B-217ENST00000474961 NOCTQ9UK39 431 aaKnown RBP10.12□□□□□ -0.79
DDX39B-217ENST00000474961 YBX2Q9Y2T7 364 aaKnown RBP10.12□□□□□ -0.79
DDX39B-217ENST00000474961 BZW2Q9Y6E2 419 aaKnown RBP10.12□□□□□ -0.79
DDX39B-217ENST00000474961 SSU72P8A0A1W2PR75 194 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 THAP12O43422 761 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 NRDCO43847 1150 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 ATP2C2O75185 946 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 FGF18O76093 207 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 OAZ2O95190 189 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 SOD2P04179 222 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 CA3P07451 260 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 VDRP11473 427 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 CD19P15391 556 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 CHRNB2P17787 502 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 PTPN1P18031 435 aaKnown RBP10.11□□□□□ -0.79
DDX39B-217ENST00000474961 TNFAIP3P21580 790 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 BRD2P25440 801 aaKnown RBP10.11□□□□□ -0.79
DDX39B-217ENST00000474961 PCSK1P29120 753 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 CDR2Q01850 454 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 PLCB3Q01970 1234 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 KRT17Q04695 432 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 YWHAHQ04917 246 aaPredicted RBP10.11□□□□□ -0.79
DDX39B-217ENST00000474961 MRPL58Q14197 206 aaKnown RBP10.11□□□□□ -0.79
DDX39B-217ENST00000474961 USP41Q3LFD5 358 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 KIAA0319Q5VV43 1072 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 TAF3Q5VWG9 929 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 DESI1Q6ICB0 168 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 DDX53Q86TM3 631 aaKnown RBP10.11□□□□□ -0.79
DDX39B-217ENST00000474961 TDHQ8IZJ6 230 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 C12orf29Q8N999 325 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 KLHL23Q8NBE8 558 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 B3GALNT2Q8NCR0 500 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 ZNF606Q8WXB4 792 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 TFAP2BQ92481 460 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 DDX1Q92499 740 aaKnown RBP10.11□□□□□ -0.79
DDX39B-217ENST00000474961 TNIP3Q96KP6 325 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 AGPAT1Q99943 283 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 LPIN3Q9BQK8 851 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 SYT15Q9BQS2 421 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 ZSWIM1Q9BR11 485 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 ACBD6Q9BR61 282 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 C17orf80Q9BSJ5 609 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 SYT11Q9BT88 431 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 TTPALQ9BTX7 342 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 HERC2P3Q9BVR0 1158 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 PLVAPQ9BX97 442 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 DNAI2Q9GZS0 605 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 NHEJ1Q9H9Q4 299 aaPredicted RBP10.11□□□□□ -0.79
DDX39B-217ENST00000474961 CHST7Q9NS84 486 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 MSRAQ9UJ68 235 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 CDH9Q9ULB4 789 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 KIAA1257Q9ULG3 409 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 RWDD3Q9Y3V2 267 aa10.11□□□□□ -0.79
DDX39B-217ENST00000474961 SOWAHDA6NJG2 315 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 H7C4K7 107 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 LILRB3O75022 631 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 MMEP08473 750 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 PSMC1P62191 440 aaKnown RBP10.1□□□□□ -0.79
DDX39B-217ENST00000474961 FMO1Q01740 532 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 TAP1Q03518 808 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 MTF1Q14872 753 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 CCDC142Q17RM4 750 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 ASTE1Q2TB18 679 aaPredicted RBP10.1□□□□□ -0.79
DDX39B-217ENST00000474961 CTXN3Q4LDR2 81 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 SGO2Q562F6 1265 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 RTP2Q5QGT7 225 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 ZNF280DQ6N043 979 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 KIAA1841Q6NSI8 718 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 PRSS55Q6UWB4 352 aaPredicted RBP10.1□□□□□ -0.79
DDX39B-217ENST00000474961 RAD9BQ6WBX8 426 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 ANKS3Q6ZW76 656 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 SPRED2Q7Z698 418 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 ZNF677Q86XU0 584 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 VPS52Q8N1B4 723 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 OR10T2Q8NGX3 314 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 OLIG1Q8TAK6 271 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 LNX1Q8TBB1 728 aaPredicted RBP10.1□□□□□ -0.79
DDX39B-217ENST00000474961 RIN2Q8WYP3 895 aaPredicted RBP10.1□□□□□ -0.79
DDX39B-217ENST00000474961 CCDC42Q96M95 316 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 SAMD11Q96NU1 681 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 TMEM209Q96SK2 561 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.1□□□□□ -0.79
DDX39B-217ENST00000474961 PBX4Q9BYU1 374 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 NKX2-4Q9H2Z4 354 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 PRO3102Q9H379 93 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 DEF6Q9H4E7 631 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 CRTAC1Q9NQ79 661 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 FAM49BQ9NUQ9 324 aa10.1□□□□□ -0.79
DDX39B-217ENST00000474961 MYO9BQ13459 2157 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 A0A087X0T9 212 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 MYBPHLA2RUH7 354 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 OR6C75A6NL08 312 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 C5orf67F2Z3F1 127 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 O00370 1275 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms