RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 GMIPQ9P107 970 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 ARMCX3Q9UH62 379 aaPredicted RBP4.32□□□□□ -1.72
USP16-205ENST00000474835 PTBP2Q9UKA9 531 aaKnown RBP4.32□□□□□ -1.72
USP16-205ENST00000474835 MATN2O00339 956 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 FBP2O00757 339 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 CAPN9O14815 690 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 DYNC1LI2O43237 492 aaPredicted RBP4.32□□□□□ -1.72
USP16-205ENST00000474835 FGGP02679 453 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 KIF5BP33176 963 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 SCNN1DP51172 638 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 BCAP31P51572 246 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 IFITM3Q01628 133 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 FMO1Q01740 532 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 KCNH2Q12809 1159 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 ADGRE1Q14246 886 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 KCTD19Q17RG1 926 aaPredicted RBP4.32□□□□□ -1.72
USP16-205ENST00000474835 LVRNQ6Q4G3 990 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 PRUNE1Q86TP1 453 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 CABP7Q86V35 215 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 REM2Q8IYK8 340 aaPredicted RBP4.32□□□□□ -1.72
USP16-205ENST00000474835 KATNAL2Q8IYT4 538 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 CMTR1Q8N1G2 835 aaKnown RBP4.32□□□□□ -1.72
USP16-205ENST00000474835 GDAP1Q8TB36 358 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 SLC35B2Q8TB61 432 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 HM13Q8TCT9 377 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 KCNV2Q8TDN2 545 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 NSUN4Q96CB9 384 aaKnown RBP4.32□□□□□ -1.72
USP16-205ENST00000474835 CYP2S1Q96SQ9 504 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 EYA3Q99504 573 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.32□□□□□ -1.728e-8■□□□□ 11.1
USP16-205ENST00000474835 NT5C3AQ9H0P0 336 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 GREM2Q9H772 168 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 GPN2Q9H9Y4 310 aaPredicted RBP4.32□□□□□ -1.72
USP16-205ENST00000474835 LRRC4BQ9NT99 713 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 C6orf203Q9P0P8 240 aaPredicted RBP4.32□□□□□ -1.72
USP16-205ENST00000474835 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.32□□□□□ -1.72
USP16-205ENST00000474835 LARSQ9P2J5 1176 aaKnown RBP4.32□□□□□ -1.72
USP16-205ENST00000474835 ADAMTS1Q9UHI8 967 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.32□□□□□ -1.72
USP16-205ENST00000474835 ALG6Q9Y672 507 aa4.32□□□□□ -1.72
USP16-205ENST00000474835 COL4A6Q14031 1691 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 C15orf38-AP3S2A0A0A6YYH1 394 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 UNCXA6NJT0 531 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 TRIM24O15164 1050 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 RGS16O15492 202 aaPredicted RBP4.31□□□□□ -1.72
USP16-205ENST00000474835 SEC14L5O43304 696 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 RFPL1O75677 317 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 KCNA6P17658 529 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 NAT1P18440 290 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 FGFR4P22455 802 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 FDFT1P37268 417 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 SERPINB4P48594 390 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 ZNF132P52740 706 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 DCTN2Q13561 401 aaKnown RBP4.31□□□□□ -1.72
USP16-205ENST00000474835 PTK2BQ14289 1009 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 GK3PQ14409 553 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 KYNUQ16719 465 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 LONRF1Q17RB8 773 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 RBM26Q5T8P6 1007 aaKnown RBP4.31□□□□□ -1.72
USP16-205ENST00000474835 STEAP4Q687X5 459 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 XAF1Q6GPH4 301 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 LAIR2Q6ISS4 152 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 SLC16A12Q6ZSM3 486 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 ARPINQ7Z6K5 226 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 RHOT2Q8IXI1 618 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 SYCP3Q8IZU3 236 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 SCAIQ8N9R8 606 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 PROCA1Q8NCQ7 364 aaPredicted RBP4.31□□□□□ -1.72
USP16-205ENST00000474835 PAPD5Q8NDF8 572 aaKnown RBP4.31□□□□□ -1.72
USP16-205ENST00000474835 DPF3Q92784 378 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 MRRFQ96E11 262 aaKnown RBP4.31□□□□□ -1.72
USP16-205ENST00000474835 MAELQ96JY0 434 aaKnown RBP4.31□□□□□ -1.72
USP16-205ENST00000474835 LRRC37BQ96QE4 947 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 OSBPL8Q9BZF1 889 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 NYXQ9GZU5 481 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 THAP2Q9H0W7 228 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 NRDE2Q9H7Z3 1164 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 ZNF287Q9HBT7 754 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 GKN1Q9NS71 199 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 CD300AQ9UGN4 299 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 GNPTGQ9UJJ9 305 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 KLF2Q9Y5W3 355 aaPredicted RBP4.31□□□□□ -1.72
USP16-205ENST00000474835 BAZ2BQ9UIF8 2168 aaKnown RBP4.31□□□□□ -1.72
USP16-205ENST00000474835 C7orf72A4D263 438 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 EIF3FO00303 357 aaPredicted RBP4.31□□□□□ -1.72
USP16-205ENST00000474835 LSM1O15116 133 aaKnown RBP4.31□□□□□ -1.72
USP16-205ENST00000474835 SEC14L2O76054 403 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 ALDH1A2O94788 518 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 SERPINA6P08185 405 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 GSTT2P0CG29 244 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 GSTT2BP0CG30 244 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 MAPTP10636 758 aaKnown RBP4.31□□□□□ -1.72
USP16-205ENST00000474835 C7P10643 843 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 ACTN1P12814 892 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 CDH5P33151 784 aaPredicted RBP4.31□□□□□ -1.72
USP16-205ENST00000474835 DPP6P42658 865 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 SLC1A1P43005 524 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 LPIN1Q14693 890 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 ACAP2Q15057 778 aa4.31□□□□□ -1.72
USP16-205ENST00000474835 PDK3Q15120 406 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms