RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 CCDC130P13994 396 aa20.9■□□□□ 0.94
SSR1-204ENST00000474597 LHX1P48742 406 aa20.9■□□□□ 0.94
SSR1-204ENST00000474597 BCAT1P54687 386 aa20.9■□□□□ 0.94
SSR1-204ENST00000474597 BRD3Q15059 726 aa20.9■□□□□ 0.94
SSR1-204ENST00000474597 GLE1Q53GS7 698 aaKnown RBP20.9■□□□□ 0.94
SSR1-204ENST00000474597 PPP1R15BQ5SWA1 713 aa20.9■□□□□ 0.94
SSR1-204ENST00000474597 TTC30AQ86WT1 665 aa20.9■□□□□ 0.94
SSR1-204ENST00000474597 RHOT1Q8IXI2 618 aa20.9■□□□□ 0.94
SSR1-204ENST00000474597 B3GALNT2Q8NCR0 500 aa20.9■□□□□ 0.94
SSR1-204ENST00000474597 KRT12Q99456 494 aa20.9■□□□□ 0.94
SSR1-204ENST00000474597 LRRC1Q9BTT6 524 aa20.9■□□□□ 0.94
SSR1-204ENST00000474597 METTL5Q9NRN9 209 aaKnown RBP20.9■□□□□ 0.94
SSR1-204ENST00000474597 TMEM59LQ9UK28 342 aa20.9■□□□□ 0.94
SSR1-204ENST00000474597 PSTPIP1O43586 416 aa20.89■□□□□ 0.93
SSR1-204ENST00000474597 PAX3P23760 479 aa20.89■□□□□ 0.93
SSR1-204ENST00000474597 RGS7P49802 495 aa20.89■□□□□ 0.93
SSR1-204ENST00000474597 CLCN6P51797 869 aa20.89■□□□□ 0.93
SSR1-204ENST00000474597 BST2Q10589 180 aaKnown RBP20.89■□□□□ 0.93
SSR1-204ENST00000474597 PKDCCQ504Y2 493 aa20.89■□□□□ 0.93
SSR1-204ENST00000474597 OR6B2Q6IFH4 312 aa20.89■□□□□ 0.93
SSR1-204ENST00000474597 TMCO3Q6UWJ1 677 aa20.89■□□□□ 0.93
SSR1-204ENST00000474597 KLHL7Q8IXQ5 586 aa20.89■□□□□ 0.93
SSR1-204ENST00000474597 ANKRD52Q8NB46 1076 aa20.89■□□□□ 0.93
SSR1-204ENST00000474597 C3orf58Q8NDZ4 430 aa20.89■□□□□ 0.93
SSR1-204ENST00000474597 LINC01599Q8WXQ3 324 aa20.89■□□□□ 0.93
SSR1-204ENST00000474597 SEPT8Q92599 483 aa20.89■□□□□ 0.93
SSR1-204ENST00000474597 LPIN3Q9BQK8 851 aa20.89■□□□□ 0.93
SSR1-204ENST00000474597 PAAF1Q9BRP4 392 aa20.89■□□□□ 0.93
SSR1-204ENST00000474597 RAB21Q9UL25 225 aa20.89■□□□□ 0.93
SSR1-204ENST00000474597 BRCA2P51587 3418 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 E5RJQ4 531 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 INPPL1O15357 1258 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 NBNO60934 754 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 ERLIN1O75477 346 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 PYGMP11217 842 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 ODC1P11926 461 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 PSMA2P25787 234 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 FAM189BP81408 668 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 FAM102AQ5T9C2 384 aaPredicted RBP20.88■□□□□ 0.93
SSR1-204ENST00000474597 SLC39A5Q6ZMH5 540 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 MTERF4Q7Z6M4 381 aaKnown RBP20.88■□□□□ 0.93
SSR1-204ENST00000474597 MCRS1Q96EZ8 462 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 DDX43Q9NXZ2 648 aaKnown RBP20.88■□□□□ 0.93
SSR1-204ENST00000474597 CCDC151A5D8V7 595 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 DCDC2CA8MYV0 355 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 PIK3R2O00459 728 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 GABRDO14764 452 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 ACAT1P24752 427 aaKnown RBP20.88■□□□□ 0.93
SSR1-204ENST00000474597 SLC8A3P57103 927 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 PDE4CQ08493 712 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 NOMO2Q5JPE7 1267 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 DAB2IPQ5VWQ8 1189 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 AADACL2Q6P093 401 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 WDR93Q6P2C0 686 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 METTL23Q86XA0 190 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 DBF4BQ8NFT6 615 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 SLC2A14Q8TDB8 520 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 KANSL3Q9P2N6 904 aa20.88■□□□□ 0.93
SSR1-204ENST00000474597 PTPN1P18031 435 aaKnown RBP20.87■□□□□ 0.93
SSR1-204ENST00000474597 IGFBP6P24592 240 aaPredicted RBP20.87■□□□□ 0.93
SSR1-204ENST00000474597 RFC1P35251 1148 aaPredicted RBP20.87■□□□□ 0.93
SSR1-204ENST00000474597 GJC1P36383 396 aa20.87■□□□□ 0.93
SSR1-204ENST00000474597 VSNL1P62760 191 aa20.87■□□□□ 0.93
SSR1-204ENST00000474597 PAN2Q504Q3 1202 aaKnown RBP20.87■□□□□ 0.93
SSR1-204ENST00000474597 TIGD5Q53EQ6 642 aa20.87■□□□□ 0.93
SSR1-204ENST00000474597 PLEKHG4Q58EX7 1191 aa20.87■□□□□ 0.93
SSR1-204ENST00000474597 ZFYVE27Q5T4F4 411 aa20.87■□□□□ 0.93
SSR1-204ENST00000474597 PMF1Q6P1K2 205 aa20.87■□□□□ 0.93
SSR1-204ENST00000474597 CC2D1AQ6P1N0 951 aaPredicted RBP20.87■□□□□ 0.93
SSR1-204ENST00000474597 ADAT2Q7Z6V5 191 aaKnown RBP20.87■□□□□ 0.93
SSR1-204ENST00000474597 NIPA2Q8N8Q9 360 aa20.87■□□□□ 0.93
SSR1-204ENST00000474597 FNIP1Q8TF40 1166 aa20.87■□□□□ 0.93
SSR1-204ENST00000474597 STK32AQ8WU08 396 aa20.87■□□□□ 0.93
SSR1-204ENST00000474597 SLC35F5Q8WV83 523 aa20.87■□□□□ 0.93
SSR1-204ENST00000474597 APBB2Q92870 758 aa20.87■□□□□ 0.93
SSR1-204ENST00000474597 HIPK3Q9H422 1215 aa20.87■□□□□ 0.93
SSR1-204ENST00000474597 TMEM161AQ9NX61 479 aa20.87■□□□□ 0.93
SSR1-204ENST00000474597 TIMM13Q9Y5L4 95 aaPredicted RBP20.87■□□□□ 0.93
SSR1-204ENST00000474597 ARHGEF37A1IGU5 675 aa20.86■□□□□ 0.93
SSR1-204ENST00000474597 COL6A1P12109 1028 aa20.86■□□□□ 0.93
SSR1-204ENST00000474597 AARSP49588 968 aaKnown RBP eCLIP20.86■□□□□ 0.93
SSR1-204ENST00000474597 OGDHQ02218 1023 aa20.86■□□□□ 0.93
SSR1-204ENST00000474597 RNASELQ05823 741 aaKnown RBP20.86■□□□□ 0.93
SSR1-204ENST00000474597 PPP2R5EQ16537 467 aa20.86■□□□□ 0.93
SSR1-204ENST00000474597 FAM43BQ6ZT52 329 aaPredicted RBP20.86■□□□□ 0.93
SSR1-204ENST00000474597 FAM183BPQ6ZVS7 135 aa20.86■□□□□ 0.93
SSR1-204ENST00000474597 CTU1Q7Z7A3 348 aaKnown RBP20.86■□□□□ 0.93
SSR1-204ENST00000474597 ABI1Q8IZP0 508 aa20.86■□□□□ 0.93
SSR1-204ENST00000474597 JOSD2Q8TAC2 188 aa20.86■□□□□ 0.93
SSR1-204ENST00000474597 RUBCNQ92622 972 aa20.86■□□□□ 0.93
SSR1-204ENST00000474597 MED10Q9BTT4 135 aa20.86■□□□□ 0.93
SSR1-204ENST00000474597 SLC4A5Q9BY07 1137 aa20.86■□□□□ 0.93
SSR1-204ENST00000474597 MTUS1Q9ULD2 1270 aa20.86■□□□□ 0.93
SSR1-204ENST00000474597 F8VP50 259 aa20.85■□□□□ 0.93
SSR1-204ENST00000474597 TULP2O00295 520 aa20.85■□□□□ 0.93
SSR1-204ENST00000474597 ATP2C2O75185 946 aa20.85■□□□□ 0.93
SSR1-204ENST00000474597 TAS2R40P59535 323 aa20.85■□□□□ 0.93
SSR1-204ENST00000474597 SLC7A5Q01650 507 aa20.85■□□□□ 0.93
SSR1-204ENST00000474597 ZNF252P-AS1Q0IIN9 211 aa20.85■□□□□ 0.93
SSR1-204ENST00000474597 ODF2Q5BJF6 829 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms