RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 MYOM3Q5VTT5 1437 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 TPRP12270 2363 aaKnown RBP6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 A0A1B0GUA9 196 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 SLC9B1P1A6NJY1 282 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 MINDY4BA8MYZ0 360 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 M0R2C6 588 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 NPC1O15118 1278 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 ACSL4O60488 711 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 CHRNA1P02708 482 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 UBTFL6P0CB48 400 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 SYN1P17600 705 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 ABCB4P21439 1286 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 CETN2P41208 172 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 SLC19A1P41440 591 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 SCNN1GP51170 649 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 CLCN4P51793 760 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 PHEXP78562 749 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 RNASELQ05823 741 aaKnown RBP6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 CYLC2Q14093 348 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 GALNT3Q14435 633 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 NFKBIBQ15653 356 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 DPYSL2Q16555 572 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 ANO4Q32M45 955 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 LRRC23Q53EV4 343 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 C1orf141Q5JVX7 400 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 TMEM53Q6P2H8 277 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 CLEC2AQ6UVW9 174 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 B3GNT9Q6UX72 402 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 MFSD2AQ8NA29 543 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 RBBP8NLQ8NC74 664 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 CDC26Q8NHZ8 85 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 SLC35G2Q8TBE7 412 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 HSPBAP1Q96EW2 488 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 LENG8Q96PV6 779 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 NUP88Q99567 741 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 TTC1Q99614 292 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 MENTQ9BUN1 341 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 SMOC1Q9H4F8 434 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 DCTPP1Q9H773 170 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 PCDH18Q9HCL0 1135 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 RPRD1BQ9NQG5 326 aaKnown RBP6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 SLC39A1Q9NY26 324 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 AKAP7Q9P0M2 348 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 SUCOQ9UBS9 1254 aaKnown RBP6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 DSEQ9UL01 958 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 PCDHB2Q9Y5E7 798 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 CAPN7Q9Y6W3 813 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 EYSQ5T1H1 3165 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 LTN1O94822 1766 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 ZFHX4Q86UP3 3567 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 GOLGA6L7A0A1B0GV03 622 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 A0A1W2PPL8 197 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 OR6C74A6NCV1 312 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 MYO1CO00159 1063 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 PLD2O14939 933 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 SMAD6O43541 496 aaKnown RBP6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 ADCY3O60266 1144 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 CYP3A4P08684 503 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 SDSP20132 328 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 AXLP30530 894 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 PPARGP37231 505 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 NR1H2P55055 460 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 ARL4CP56559 192 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 MAP3K7CLP57077 242 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 RNASE9P60153 205 aaKnown RBP6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 IFI35P80217 286 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 ACTN3Q08043 901 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 NCBP1Q09161 790 aaKnown RBP6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 C19orf57Q0VDD7 668 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 USP4Q13107 963 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 ATP2B3Q16720 1220 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 CCDC62Q6P9F0 684 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 TUBA3EQ6PEY2 450 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 TRAF7Q6Q0C0 670 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 VASH1Q7L8A9 365 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 NLRC3Q7RTR2 1065 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 ARHGAP22Q7Z5H3 698 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 C12orf56Q8IXR9 622 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 MAML2Q8IZL2 1156 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 ETNPPLQ8TBG4 499 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 PTP4A1Q93096 173 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 MNTQ99583 582 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 SIKE1Q9BRV8 207 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 ANKRD30AQ9BXX3 1397 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 CABP1Q9NZU7 370 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 HMG20BQ9P0W2 317 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 UBA2Q9UBT2 640 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 CHIC2Q9UKJ5 165 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 DDX19BQ9UMR2 479 aa6.43□□□□□ -1.38
SMARCE1-208ENST00000474246 ZNF646O15015 1829 aaPredicted RBP6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 SSC5DA1L4H1 1573 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 LCHNA4D1U4 455 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 PRR5-ARHGAP8B1AHC4 643 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 GPR89AB7ZAQ6 455 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 NDUFS8O00217 210 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 EIF1AYO14602 144 aaKnown RBP6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 GIPC1O14908 333 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 GPR89BP0CG08 455 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 PRKAR1AP10644 381 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 IARSP41252 1262 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms