RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 TBX4P57082 545 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 SAFBQ15424 915 aaKnown RBP eCLIP4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 INSCQ1MX18 579 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 STRIP1Q5VSL9 837 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 ICE2Q659A1 982 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 CYB5RLQ6IPT4 315 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 TAF2Q6P1X5 1199 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 Q6YL49 198 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 GPR149Q86SP6 731 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 GAS2L3Q86XJ1 694 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 FAM9AQ8IZU1 332 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 PCSK9Q8NBP7 692 aaKnown RBP4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 ASB10Q8WXI3 467 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 NACC2Q96BF6 587 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 TRIM43Q96BQ3 446 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 STRBPQ96SI9 672 aaKnown RBP4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 UNKQ9C0B0 810 aaKnown RBP4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 SERHLQ9NQF3 203 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 SYBUQ9NX95 663 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 DDX20Q9UHI6 824 aaKnown RBP4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 TBX3O15119 743 aa4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 CCP110O43303 1012 aa4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 TLR5O60602 858 aa4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 PTTG1IPP53801 180 aa4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 SCAPQ12770 1279 aa4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 IFIT5Q13325 482 aaKnown RBP4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 PTPRRQ15256 657 aa4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 LLGL1Q15334 1064 aa4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 HECTD2Q5U5R9 776 aa4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 VWA1Q6PCB0 445 aa4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 Q6ZNX1 250 aa4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 SDR16C5Q8N3Y7 309 aa4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 DNAJC5GQ8N7S2 189 aa4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 ATRIPQ8WXE1 791 aa4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 FAM136AQ96C01 138 aa4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 SLC46A1Q96NT5 459 aa4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 PPP1R9BQ96SB3 815 aa4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 P2RX7Q99572 595 aaKnown RBP4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 AIFM2Q9BRQ8 373 aa4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 PTDSS2Q9BVG9 487 aa4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 PNPLA8Q9NP80 782 aa4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 LRIT1Q9P2V4 623 aa4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 AGAP1Q9UPQ3 857 aa4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 SH2B3Q9UQQ2 575 aa4.04□□□□□ -1.76
ECHDC1-213ENST00000474240 CCDC78A2IDD5 438 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 A6NNZ2 444 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 PROB1E7EW31 1015 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 KIAA0355O15063 1070 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 YY2O15391 372 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 ZFPL1O95159 310 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 ONECUT2O95948 504 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 NBPF7P0C2Y1 421 aaPredicted RBP4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 MYBP10242 640 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 FOLR3P41439 243 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 UCP3P55916 312 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 MRPS35P82673 323 aaKnown RBP4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 PICALMQ13492 652 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 E2F2Q14209 437 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 CD300EQ496F6 205 aaPredicted RBP4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 PLAC9Q5JTB6 97 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 RBM20Q5T481 1227 aaKnown RBP4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 SWSAP1Q6NVH7 229 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 RD3Q7Z3Z2 195 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 YAF2Q8IY57 180 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 FAM109AQ8N4B1 249 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 PJA1Q8NG27 643 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 SPSB4Q96A44 273 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 Q96MF0 132 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 NT5C1BQ96P26 610 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 MESP1Q9BRJ9 268 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 TPSD1Q9BZJ3 242 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 BHMT2Q9H2M3 363 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 DHX36Q9H2U1 1008 aaKnown RBP4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 SYNPO2LQ9H987 977 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 XPNPEP3Q9NQH7 507 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 PADI4Q9UM07 663 aa4.03□□□□□ -1.76
ECHDC1-213ENST00000474240 GCOM1H8Y6P7 765 aaPredicted RBP4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 VPS4BO75351 444 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 MAP4K4O95819 1239 aaPredicted RBP4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 SEC24CP53992 1094 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 SUMO3P55854 103 aaPredicted RBP4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 KRTAP10-6P60371 365 aaPredicted RBP4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 MC2RQ01718 297 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 FMO1Q01740 532 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 KRT17Q04695 432 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 CTBP1Q13363 440 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 SF3B3Q15393 1217 aaKnown RBP4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 ZNF618Q5T7W0 954 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 KIAA0895LQ68EN5 471 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 OLFML1Q6UWY5 402 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 TMEM108Q6UXF1 575 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 SLC30A10Q6XR72 485 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 GRASPQ7Z6J2 395 aaPredicted RBP4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 MPP5Q8N3R9 675 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 SLC15A4Q8N697 577 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 BEND2Q8NDZ0 799 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 PHKBQ93100 1093 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 TIFAQ96CG3 184 aa4.02□□□□□ -1.77
ECHDC1-213ENST00000474240 ZNF668Q96K58 619 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms