RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 MICAL2O94851 1124 aa20.21■□□□□ 0.83
PTCD3-210ENST00000473829 VEPH1Q14D04 833 aa20.21■□□□□ 0.83
PTCD3-210ENST00000473829 TEAD2Q15562 447 aa20.21■□□□□ 0.83
PTCD3-210ENST00000473829 STXBP5Q5T5C0 1151 aa20.21■□□□□ 0.83
PTCD3-210ENST00000473829 FILIP1Q7Z7B0 1213 aa20.21■□□□□ 0.83
PTCD3-210ENST00000473829 ITIH5Q86UX2 942 aa20.21■□□□□ 0.83
PTCD3-210ENST00000473829 UBALD2Q8IYN6 164 aa20.21■□□□□ 0.83
PTCD3-210ENST00000473829 SLC44A3Q8N4M1 653 aa20.21■□□□□ 0.83
PTCD3-210ENST00000473829 MYCBPAPQ8TBZ2 947 aa20.21■□□□□ 0.83
PTCD3-210ENST00000473829 FUBP3Q96I24 572 aaKnown RBP eCLIP20.21■□□□□ 0.83
PTCD3-210ENST00000473829 KXD1Q9BQD3 176 aa20.21■□□□□ 0.83
PTCD3-210ENST00000473829 BCO2Q9BYV7 579 aa20.21■□□□□ 0.83
PTCD3-210ENST00000473829 NUP62CLQ9H1M0 184 aa20.21■□□□□ 0.83
PTCD3-210ENST00000473829 GDE1Q9NZC3 331 aa20.21■□□□□ 0.83
PTCD3-210ENST00000473829 ARMCX3Q9UH62 379 aaPredicted RBP20.21■□□□□ 0.83
PTCD3-210ENST00000473829 DUSP12Q9UNI6 340 aa20.21■□□□□ 0.83
PTCD3-210ENST00000473829 BICDL2A1A5D9 508 aa20.2■□□□□ 0.82
PTCD3-210ENST00000473829 HMGA1P17096 107 aaKnown RBP20.2■□□□□ 0.82
PTCD3-210ENST00000473829 PTPN1P18031 435 aaKnown RBP20.2■□□□□ 0.82
PTCD3-210ENST00000473829 FCARP24071 287 aa20.2■□□□□ 0.82
PTCD3-210ENST00000473829 CYP27A1Q02318 531 aa20.2■□□□□ 0.82
PTCD3-210ENST00000473829 ORC1Q13415 861 aa20.2■□□□□ 0.82
PTCD3-210ENST00000473829 C4orf50Q6ZRC1 276 aa20.2■□□□□ 0.82
PTCD3-210ENST00000473829 HFE2Q6ZVN8 426 aa20.2■□□□□ 0.82
PTCD3-210ENST00000473829 B3GALNT2Q8NCR0 500 aa20.2■□□□□ 0.82
PTCD3-210ENST00000473829 NXPE3Q969Y0 559 aa20.2■□□□□ 0.82
PTCD3-210ENST00000473829 TMEM30AQ9NV96 361 aa20.2■□□□□ 0.82
PTCD3-210ENST00000473829 MAGEC2Q9UBF1 373 aaPredicted RBP20.2■□□□□ 0.82
PTCD3-210ENST00000473829 PRR33A8MZF0 331 aa20.19■□□□□ 0.82
PTCD3-210ENST00000473829 STX10O60499 249 aa20.19■□□□□ 0.82
PTCD3-210ENST00000473829 P4HA1P13674 534 aa20.19■□□□□ 0.82
PTCD3-210ENST00000473829 BDNFP23560 247 aa20.19■□□□□ 0.82
PTCD3-210ENST00000473829 GABRR2P28476 465 aa20.19■□□□□ 0.82
PTCD3-210ENST00000473829 MAGEA11P43364 429 aa20.19■□□□□ 0.82
PTCD3-210ENST00000473829 CACNA2D1P54289 1103 aa20.19■□□□□ 0.82
PTCD3-210ENST00000473829 MAPRE1Q15691 268 aaKnown RBP20.19■□□□□ 0.82
PTCD3-210ENST00000473829 FAM78AQ5JUQ0 283 aa20.19■□□□□ 0.82
PTCD3-210ENST00000473829 FRMD5Q7Z6J6 570 aa20.19■□□□□ 0.82
PTCD3-210ENST00000473829 SCN4BQ8IWT1 228 aa20.19■□□□□ 0.82
PTCD3-210ENST00000473829 FBXL13Q8NEE6 735 aa20.19■□□□□ 0.82
PTCD3-210ENST00000473829 B3GNT5Q9BYG0 378 aa20.19■□□□□ 0.82
PTCD3-210ENST00000473829 IMPG2Q9BZV3 1241 aa20.19■□□□□ 0.82
PTCD3-210ENST00000473829 NIF3L1Q9GZT8 377 aa20.19■□□□□ 0.82
PTCD3-210ENST00000473829 RAB20Q9NX57 234 aa20.19■□□□□ 0.82
PTCD3-210ENST00000473829 NUP210Q8TEM1 1887 aaPredicted RBP20.19■□□□□ 0.82
PTCD3-210ENST00000473829 NCANO14594 1321 aa20.19■□□□□ 0.82
PTCD3-210ENST00000473829 CLDN5O00501 218 aa20.18■□□□□ 0.82
PTCD3-210ENST00000473829 PDGFBP01127 241 aaPredicted RBP20.18■□□□□ 0.82
PTCD3-210ENST00000473829 NDST1P52848 882 aa20.18■□□□□ 0.82
PTCD3-210ENST00000473829 RPL10AP62906 217 aaKnown RBP20.18■□□□□ 0.82
PTCD3-210ENST00000473829 CYP4F8P98187 520 aa20.18■□□□□ 0.82
PTCD3-210ENST00000473829 DPCR1Q3MIW9 517 aa20.18■□□□□ 0.82
PTCD3-210ENST00000473829 CCDC40Q4G0X9 1142 aa20.18■□□□□ 0.82
PTCD3-210ENST00000473829 MTSS1LQ765P7 747 aa20.18■□□□□ 0.82
PTCD3-210ENST00000473829 TMEM150AQ86TG1 271 aa20.18■□□□□ 0.82
PTCD3-210ENST00000473829 ASB16Q96NS5 453 aa20.18■□□□□ 0.82
PTCD3-210ENST00000473829 TWNKQ96RR1 684 aa20.18■□□□□ 0.82
PTCD3-210ENST00000473829 PLA2G2FQ9BZM2 168 aa20.18■□□□□ 0.82
PTCD3-210ENST00000473829 ZNF518BQ9C0D4 1074 aa20.18■□□□□ 0.82
PTCD3-210ENST00000473829 METTL14Q9HCE5 456 aaKnown RBP20.18■□□□□ 0.82
PTCD3-210ENST00000473829 RWDD2AQ9UIY3 292 aa20.18■□□□□ 0.82
PTCD3-210ENST00000473829 COQ4Q9Y3A0 265 aa20.18■□□□□ 0.82
PTCD3-210ENST00000473829 COL4A3Q01955 1670 aa20.17■□□□□ 0.82
PTCD3-210ENST00000473829 SLC38A8A6NNN8 435 aa20.17■□□□□ 0.82
PTCD3-210ENST00000473829 NOL4O94818 638 aa20.17■□□□□ 0.82
PTCD3-210ENST00000473829 INCA1Q0VD86 236 aa20.17■□□□□ 0.82
PTCD3-210ENST00000473829 TANGO2Q6ICL3 276 aa20.17■□□□□ 0.82
PTCD3-210ENST00000473829 ACOT1Q86TX2 421 aa20.17■□□□□ 0.82
PTCD3-210ENST00000473829 ARID3AQ99856 593 aa20.17■□□□□ 0.82
PTCD3-210ENST00000473829 SRRTQ9BXP5 876 aaKnown RBP20.17■□□□□ 0.82
PTCD3-210ENST00000473829 ATXN3LQ9H3M9 355 aa20.17■□□□□ 0.82
PTCD3-210ENST00000473829 MAGED2Q9UNF1 606 aaPredicted RBP20.17■□□□□ 0.82
PTCD3-210ENST00000473829 KMT2EQ8IZD2 1858 aa20.16■□□□□ 0.82
PTCD3-210ENST00000473829 TADA3O75528 432 aa20.16■□□□□ 0.82
PTCD3-210ENST00000473829 CFHP08603 1231 aa20.16■□□□□ 0.82
PTCD3-210ENST00000473829 CSH1P0DML2 217 aa20.16■□□□□ 0.82
PTCD3-210ENST00000473829 CSH2P0DML3 217 aa20.16■□□□□ 0.82
PTCD3-210ENST00000473829 SRFP11831 508 aa20.16■□□□□ 0.82
PTCD3-210ENST00000473829 CD58P19256 250 aa20.16■□□□□ 0.82
PTCD3-210ENST00000473829 FMO5P49326 533 aa20.16■□□□□ 0.82
PTCD3-210ENST00000473829 NLRP12P59046 1061 aa20.16■□□□□ 0.82
PTCD3-210ENST00000473829 TAF12Q16514 161 aa20.16■□□□□ 0.82
PTCD3-210ENST00000473829 VSTM1Q6UX27 236 aa20.16■□□□□ 0.82
PTCD3-210ENST00000473829 PAQR9Q6ZVX9 377 aa20.16■□□□□ 0.82
PTCD3-210ENST00000473829 TRIM59Q8IWR1 403 aa20.16■□□□□ 0.82
PTCD3-210ENST00000473829 MLKLQ8NB16 471 aa20.16■□□□□ 0.82
PTCD3-210ENST00000473829 ZSCAN18Q8TBC5 510 aaPredicted RBP20.16■□□□□ 0.82
PTCD3-210ENST00000473829 WHAMMQ8TF30 809 aa20.16■□□□□ 0.82
PTCD3-210ENST00000473829 TATDN2Q93075 761 aa20.16■□□□□ 0.82
PTCD3-210ENST00000473829 SLITRK6Q9H5Y7 841 aa20.16■□□□□ 0.82
PTCD3-210ENST00000473829 ANAPC1Q9H1A4 1944 aa20.15■□□□□ 0.82
PTCD3-210ENST00000473829 ZNF638Q14966 1978 aaKnown RBP20.15■□□□□ 0.82
PTCD3-210ENST00000473829 F8VP50 259 aa20.15■□□□□ 0.82
PTCD3-210ENST00000473829 ECI2O75521 394 aa20.15■□□□□ 0.82
PTCD3-210ENST00000473829 FGF19O95750 216 aa20.15■□□□□ 0.82
PTCD3-210ENST00000473829 F11P03951 625 aa20.15■□□□□ 0.82
PTCD3-210ENST00000473829 CCDC130P13994 396 aa20.15■□□□□ 0.82
PTCD3-210ENST00000473829 CDC25CP30307 473 aa20.15■□□□□ 0.82
PTCD3-210ENST00000473829 GRIK1P39086 918 aa20.15■□□□□ 0.82
PTCD3-210ENST00000473829 VIPR2P41587 438 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms