RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 SGCGQ13326 291 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 C2orf76Q3KRA6 126 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 FLYWCH1Q4VC44 716 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 CEP55Q53EZ4 464 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 BMP2KLQ5H9B9 411 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 DCAF17Q5H9S7 520 aaPredicted RBP6.44□□□□□ -1.38
RTF1-203ENST00000473214 TANGO2Q6ICL3 276 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 CNKSR3Q6P9H4 555 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 CTR9Q6PD62 1173 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 FBXO38Q6PIJ6 1188 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 ANGPTL8Q6UXH0 198 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 GBP6Q6ZN66 633 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 FRMD7Q6ZUT3 714 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 RTN4RL1Q86UN2 441 aaPredicted RBP6.44□□□□□ -1.38
RTF1-203ENST00000473214 SIRT2Q8IXJ6 389 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 ANKRD35Q8N283 1001 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 C10orf53Q8N6V4 93 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 DRAXINQ8NBI3 349 aaPredicted RBP6.44□□□□□ -1.38
RTF1-203ENST00000473214 FAM71BQ8TC56 605 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 GRK7Q8WTQ7 553 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 AUTS2Q8WXX7 1259 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 TBC1D5Q92609 795 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 ATP6V0A1Q93050 837 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 PTP4A1Q93096 173 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 CDCA5Q96FF9 252 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 ZNF764Q96H86 408 aaPredicted RBP6.44□□□□□ -1.38
RTF1-203ENST00000473214 RCC1LQ96I51 464 aaKnown RBP6.44□□□□□ -1.38
RTF1-203ENST00000473214 FAM81BQ96LP2 452 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 AK8Q96MA6 479 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 NKX2-4Q9H2Z4 354 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 SEMA6CQ9H3T2 930 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 COPS7BQ9H9Q2 264 aaPredicted RBP6.44□□□□□ -1.38
RTF1-203ENST00000473214 UBA2Q9UBT2 640 aaPredicted RBP6.44□□□□□ -1.38
RTF1-203ENST00000473214 CGGBP1Q9UFW8 167 aaPredicted RBP6.44□□□□□ -1.38
RTF1-203ENST00000473214 PRDM4Q9UKN5 801 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 PCDHGC5Q9Y5F6 944 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 TACC3Q9Y6A5 838 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 IRS2Q9Y4H2 1338 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 BLMP54132 1417 aaPredicted RBP6.43□□□□□ -1.38
RTF1-203ENST00000473214 GCC2Q8IWJ2 1684 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 A0A0U1RQK1 487 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 ZNF320A2RRD8 509 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 NUDT19A8MXV4 375 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 PODXLO00592 558 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 HNRNPDLO14979 420 aaKnown RBP6.43□□□□□ -1.38
RTF1-203ENST00000473214 CTAGE5O15320 804 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 PHGDHO43175 533 aaKnown RBP6.43□□□□□ -1.38
RTF1-203ENST00000473214 SYNCRIPO60506 623 aaKnown RBP6.43□□□□□ -1.38
RTF1-203ENST00000473214 CTSBP07858 339 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 TMIGD3P0DMS9 266 aaPredicted RBP6.43□□□□□ -1.38
RTF1-203ENST00000473214 FGFR2P21802 821 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 HOXA11P31270 313 aaPredicted RBP6.43□□□□□ -1.38
RTF1-203ENST00000473214 AKT1P31749 480 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 RGS2P41220 211 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 YBEYP58557 167 aaPredicted RBP6.43□□□□□ -1.38
RTF1-203ENST00000473214 SMAD3P84022 425 aaKnown RBP6.43□□□□□ -1.38
RTF1-203ENST00000473214 AIMP1Q12904 312 aaKnown RBP6.43□□□□□ -1.38
RTF1-203ENST00000473214 PAK1Q13153 545 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 MAMLD1Q13495 774 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 NFE2L1Q14494 772 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 POU4F3Q15319 338 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 SEC23AQ15436 765 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 ARHGAP44Q17R89 818 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 ALG11Q2TAA5 492 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 FAM47CQ5HY64 1035 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 SEZ6L2Q6UXD5 910 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 PDZD3Q86UT5 571 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 SESTD1Q86VW0 696 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 WFDC3Q8IUB2 231 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 C17orf53Q8N3J3 647 aaPredicted RBP6.43□□□□□ -1.38
RTF1-203ENST00000473214 OXR1Q8N573 874 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 USHBP1Q8N6Y0 703 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 ATP11CQ8NB49 1132 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 PCDH19Q8TAB3 1148 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 BCL7CQ8WUZ0 217 aaPredicted RBP6.43□□□□□ -1.38
RTF1-203ENST00000473214 ELMO3Q96BJ8 720 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 DACH2Q96NX9 599 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 GBP5Q96PP8 586 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 WDR24Q96S15 920 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 ITPAQ9BY32 194 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 ACSS3Q9H6R3 686 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 LRRC4CQ9HCJ2 640 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 ZNF304Q9HCX3 659 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 SEPSECSQ9HD40 501 aaKnown RBP6.43□□□□□ -1.38
RTF1-203ENST00000473214 TCF7L2Q9NQB0 619 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 TBC1D14Q9P2M4 693 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 MYO1AQ9UBC5 1043 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 ANAPC5Q9UJX4 755 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 EDARQ9UNE0 448 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 SPO11Q9Y5K1 396 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 NPFFR2Q9Y5X5 522 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 EHBP1L1Q8N3D4 1523 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 PLEKHG1Q9ULL1 1385 aa6.43□□□□□ -1.38
RTF1-203ENST00000473214 CEP162Q5TB80 1403 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 A0A088AWK7 358 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.42□□□□□ -1.38
RTF1-203ENST00000473214 CCDC154A6NI56 674 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 PTGES3LE9PB15 166 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 H0YAE9 185 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 K7EPI3 171 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms