RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 HAPLN1P10915 354 aaPredicted RBP14□□□□□ -0.17
TPM3-216ENST00000473036 CYP2F1P24903 491 aa14□□□□□ -0.17
TPM3-216ENST00000473036 ELF1P32519 619 aa14□□□□□ -0.17
TPM3-216ENST00000473036 SDHAF4Q5VUM1 108 aa14□□□□□ -0.17
TPM3-216ENST00000473036 ASTLQ6HA08 431 aaPredicted RBP14□□□□□ -0.17
TPM3-216ENST00000473036 CYP26C1Q6V0L0 522 aa14□□□□□ -0.17
TPM3-216ENST00000473036 CCDC149Q6ZUS6 474 aa14□□□□□ -0.17
TPM3-216ENST00000473036 PAQR9Q6ZVX9 377 aa14□□□□□ -0.17
TPM3-216ENST00000473036 RTL10Q7L3V2 364 aa14□□□□□ -0.17
TPM3-216ENST00000473036 TMC8Q8IU68 726 aa14□□□□□ -0.17
TPM3-216ENST00000473036 ZDHHC14Q8IZN3 488 aa14□□□□□ -0.17
TPM3-216ENST00000473036 ST13P5Q8NFI4 369 aaPredicted RBP14□□□□□ -0.17
TPM3-216ENST00000473036 OR6B3Q8NGW1 331 aa14□□□□□ -0.17
TPM3-216ENST00000473036 GPR152Q8TDT2 470 aa14□□□□□ -0.17
TPM3-216ENST00000473036 MYLPFQ96A32 169 aa14□□□□□ -0.17
TPM3-216ENST00000473036 TCEAL4Q96EI5 215 aa14□□□□□ -0.17
TPM3-216ENST00000473036 NAT10Q9H0A0 1025 aaKnown RBP14□□□□□ -0.17
TPM3-216ENST00000473036 HSD3B7Q9H2F3 369 aa14□□□□□ -0.17
TPM3-216ENST00000473036 ZNF334Q9HCZ1 680 aaPredicted RBP14□□□□□ -0.17
TPM3-216ENST00000473036 FAM86C1Q9NVL1 165 aa14□□□□□ -0.17
TPM3-216ENST00000473036 ABI2Q9NYB9 513 aaPredicted RBP14□□□□□ -0.17
TPM3-216ENST00000473036 CDH9Q9ULB4 789 aa14□□□□□ -0.17
TPM3-216ENST00000473036 MAFFQ9ULX9 164 aa14□□□□□ -0.17
TPM3-216ENST00000473036 DENND4CQ5VZ89 1909 aa14□□□□□ -0.17
TPM3-216ENST00000473036 OBSL1O75147 1896 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 CACNA1AO00555 2505 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 PRR23AA6NEV1 266 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 CLDN5O00501 218 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 GNA14O95837 355 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 PTPN1P18031 435 aaKnown RBP13.99□□□□□ -0.17
TPM3-216ENST00000473036 PCSK1P29120 753 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 NDST1P52848 882 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 TSPY1Q01534 308 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 APBA1Q02410 837 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 TYRO3Q06418 890 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 INCA1Q0VD86 236 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 NCAPHQ15003 741 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 MDH1BQ5I0G3 518 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 PRSS36Q5K4E3 855 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 DCP1BQ8IZD4 617 aaKnown RBP13.99□□□□□ -0.17
TPM3-216ENST00000473036 UBR7Q8N806 425 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 MYCBPAPQ8TBZ2 947 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 KAT5Q92993 513 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 PCED1BQ96HM7 432 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 B3GNT5Q9BYG0 378 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 ELOVL4Q9GZR5 314 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 NIF3L1Q9GZT8 377 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 SNX25Q9H3E2 840 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 THAP9Q9H5L6 903 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 PIDD1Q9HB75 910 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 ANO10Q9NW15 660 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 HSFX1Q9UBD0 423 aa13.99□□□□□ -0.17
TPM3-216ENST00000473036 ZNF638Q14966 1978 aaKnown RBP13.98□□□□□ -0.17
TPM3-216ENST00000473036 GVINP1Q7Z2Y8 2422 aa13.98□□□□□ -0.17
TPM3-216ENST00000473036 A8MXQ7 604 aa13.98□□□□□ -0.17
TPM3-216ENST00000473036 STX10O60499 249 aa13.98□□□□□ -0.17
TPM3-216ENST00000473036 LRG1P02750 347 aa13.98□□□□□ -0.17
TPM3-216ENST00000473036 RHOP08100 348 aa13.98□□□□□ -0.17
TPM3-216ENST00000473036 HMGA1P17096 107 aaKnown RBP13.98□□□□□ -0.17
TPM3-216ENST00000473036 EPHA5P54756 1037 aa13.98□□□□□ -0.17
TPM3-216ENST00000473036 LRMPQ12912 555 aa13.98□□□□□ -0.17
TPM3-216ENST00000473036 DDR2Q16832 855 aa13.98□□□□□ -0.17
TPM3-216ENST00000473036 ZSCAN23Q3MJ62 389 aa13.98□□□□□ -0.17
TPM3-216ENST00000473036 MGAT5BQ3V5L5 792 aa13.98□□□□□ -0.17
TPM3-216ENST00000473036 MIIPQ5JXC2 388 aa13.98□□□□□ -0.17
TPM3-216ENST00000473036 DPY19L2P1Q6NXN4 242 aa13.98□□□□□ -0.17
TPM3-216ENST00000473036 ASCL5Q7RTU5 278 aa13.98□□□□□ -0.17
TPM3-216ENST00000473036 ACOT1Q86TX2 421 aa13.98□□□□□ -0.17
TPM3-216ENST00000473036 ARHGEF19Q8IW93 802 aa13.98□□□□□ -0.17
TPM3-216ENST00000473036 C12orf29Q8N999 325 aa13.98□□□□□ -0.17
TPM3-216ENST00000473036 B3GALNT2Q8NCR0 500 aa13.98□□□□□ -0.17
TPM3-216ENST00000473036 ENOX1Q8TC92 643 aaKnown RBP13.98□□□□□ -0.17
TPM3-216ENST00000473036 SPPL2BQ8TCT7 592 aa13.98□□□□□ -0.17
TPM3-216ENST00000473036 GIPC2Q8TF65 315 aa13.98□□□□□ -0.17
TPM3-216ENST00000473036 C2orf15Q8WU43 125 aaKnown RBP13.98□□□□□ -0.17
TPM3-216ENST00000473036 NKD2Q969F2 451 aaPredicted RBP13.98□□□□□ -0.17
TPM3-216ENST00000473036 SEPT5Q99719 369 aaPredicted RBP13.98□□□□□ -0.17
TPM3-216ENST00000473036 CORO1BQ9BR76 489 aa13.98□□□□□ -0.17
TPM3-216ENST00000473036 PCDHB5Q9Y5E4 795 aa13.98□□□□□ -0.17
TPM3-216ENST00000473036 WDR87Q6ZQQ6 2873 aa13.97□□□□□ -0.17
TPM3-216ENST00000473036 ZNF292O60281 2723 aa13.97□□□□□ -0.17
TPM3-216ENST00000473036 XYLBO75191 536 aa13.97□□□□□ -0.17
TPM3-216ENST00000473036 CILPO75339 1184 aa13.97□□□□□ -0.17
TPM3-216ENST00000473036 AFPP02771 609 aaKnown RBP13.97□□□□□ -0.17
TPM3-216ENST00000473036 GJA1P17302 382 aa13.97□□□□□ -0.17
TPM3-216ENST00000473036 CEBPBP17676 345 aa13.97□□□□□ -0.17
TPM3-216ENST00000473036 PTPN2P17706 415 aa13.97□□□□□ -0.17
TPM3-216ENST00000473036 CD58P19256 250 aa13.97□□□□□ -0.17
TPM3-216ENST00000473036 BDNFP23560 247 aa13.97□□□□□ -0.17
TPM3-216ENST00000473036 NFE2Q16621 373 aaPredicted RBP13.97□□□□□ -0.17
TPM3-216ENST00000473036 STX1AQ16623 288 aa13.97□□□□□ -0.17
TPM3-216ENST00000473036 CFAP221Q4G0U5 840 aa13.97□□□□□ -0.17
TPM3-216ENST00000473036 PABPC1LQ4VXU2 614 aaKnown RBP13.97□□□□□ -0.17
TPM3-216ENST00000473036 CDKAL1Q5VV42 579 aa13.97□□□□□ -0.17
TPM3-216ENST00000473036 ELMSAN1Q6PJG2 1045 aa13.97□□□□□ -0.17
TPM3-216ENST00000473036 GET4Q7L5D6 327 aaPredicted RBP13.97□□□□□ -0.17
TPM3-216ENST00000473036 DNAJB7Q7Z6W7 309 aaPredicted RBP13.97□□□□□ -0.17
TPM3-216ENST00000473036 TMEM150AQ86TG1 271 aa13.97□□□□□ -0.17
TPM3-216ENST00000473036 FUKQ8N0W3 1084 aa13.97□□□□□ -0.17
TPM3-216ENST00000473036 CRYBG2Q8N1P7 616 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms