RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 CEP83Q9Y592 693 aa20.6■□□□□ 0.89
CHMP2B-204ENST00000472024 LILRB3O75022 631 aa20.59■□□□□ 0.89
CHMP2B-204ENST00000472024 FGF18O76093 207 aa20.59■□□□□ 0.89
CHMP2B-204ENST00000472024 RB1P06400 928 aa20.59■□□□□ 0.89
CHMP2B-204ENST00000472024 H2AFZP0C0S5 128 aa20.59■□□□□ 0.89
CHMP2B-204ENST00000472024 TMEM253P0C7T8 217 aa20.59■□□□□ 0.89
CHMP2B-204ENST00000472024 MMP8P22894 467 aa20.59■□□□□ 0.89
CHMP2B-204ENST00000472024 ARHGAP25P42331 645 aa20.59■□□□□ 0.89
CHMP2B-204ENST00000472024 BCAT1P54687 386 aa20.59■□□□□ 0.89
CHMP2B-204ENST00000472024 C1QBPQ07021 282 aaKnown RBP20.59■□□□□ 0.89
CHMP2B-204ENST00000472024 PTP4A2Q12974 167 aa20.59■□□□□ 0.89
CHMP2B-204ENST00000472024 GOLGA7BQ2TAP0 167 aa20.59■□□□□ 0.89
CHMP2B-204ENST00000472024 MDH1BQ5I0G3 518 aa20.59■□□□□ 0.89
CHMP2B-204ENST00000472024 H2AFVQ71UI9 128 aa20.59■□□□□ 0.89
CHMP2B-204ENST00000472024 MON1BQ7L1V2 547 aa20.59■□□□□ 0.89
CHMP2B-204ENST00000472024 LRRTM3Q86VH5 581 aa20.59■□□□□ 0.89
CHMP2B-204ENST00000472024 DCP1BQ8IZD4 617 aaKnown RBP20.59■□□□□ 0.89
CHMP2B-204ENST00000472024 SLC2A14Q8TDB8 520 aa20.59■□□□□ 0.89
CHMP2B-204ENST00000472024 SLC35F5Q8WV83 523 aa20.59■□□□□ 0.89
CHMP2B-204ENST00000472024 PCED1BQ96HM7 432 aa20.59■□□□□ 0.89
CHMP2B-204ENST00000472024 FUBP3Q96I24 572 aaKnown RBP eCLIP20.59■□□□□ 0.89
CHMP2B-204ENST00000472024 B3GNT5Q9BYG0 378 aa20.59■□□□□ 0.89
CHMP2B-204ENST00000472024 UBXN6Q9BZV1 441 aa20.59■□□□□ 0.89
CHMP2B-204ENST00000472024 PRO3102Q9H379 93 aa20.59■□□□□ 0.89
CHMP2B-204ENST00000472024 NLRC5Q86WI3 1866 aa20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 A0A0A6YYK5 440 aaPredicted RBP20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 RCCD1A6NED2 376 aa20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 FTLP02792 175 aaPredicted RBP20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 MYBL1P10243 752 aa20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 CCDC130P13994 396 aa20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 UBE3AQ05086 875 aa20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 NFE2Q16621 373 aaPredicted RBP20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 CFAP221Q4G0U5 840 aa20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 CTXN3Q4LDR2 81 aa20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 NAA35Q5VZE5 725 aa20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 FAM109BQ6ICB4 259 aaPredicted RBP20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 TRIM11Q96F44 468 aa20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 PPP1R13BQ96KQ4 1090 aa20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 LPIN3Q9BQK8 851 aa20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 DUSP16Q9BY84 665 aa20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 TSGA10Q9BZW7 698 aa20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 ZBP1Q9H171 429 aa20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 PDCL3Q9H2J4 239 aa20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 CSNK1G1Q9HCP0 422 aa20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 ABCB6Q9NP58 842 aa20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 AVENQ9NQS1 362 aaPredicted RBP20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 FAM49BQ9NUQ9 324 aa20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 SEPT11Q9NVA2 429 aaKnown RBP20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 HESX1Q9UBX0 185 aa20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 CYTH4Q9UIA0 394 aa20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 GTF3C4Q9UKN8 822 aa20.58■□□□□ 0.89
CHMP2B-204ENST00000472024 PTPRDP23468 1912 aa20.58■□□□□ 0.88
CHMP2B-204ENST00000472024 NCANO14594 1321 aa20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 M0QYV0 167 aa20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 NSFP46459 744 aaKnown RBP20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 PLA2G4AP47712 749 aa20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 GABRB2P47870 512 aa20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 GLUD2P49448 558 aa20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 GALCP54803 685 aa20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 KRT17Q04695 432 aa20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 BST2Q10589 180 aaKnown RBP20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 GPR17Q13304 367 aa20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 CCDC142Q17RM4 750 aa20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 FAM35AQ86V20 835 aa20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 MCOLN2Q8IZK6 566 aa20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 KLHL23Q8NBE8 558 aa20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 C1orf131Q8NDD1 294 aaKnown RBP20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 C2orf15Q8WU43 125 aaKnown RBP20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 MYLPFQ96A32 169 aa20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 TMEM209Q96SK2 561 aa20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 SLC4A5Q9BY07 1137 aa20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 PACSIN1Q9BY11 444 aa20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 LACRTQ9GZZ8 138 aa20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 RXFP1Q9HBX9 757 aa20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 TMLHEQ9NVH6 421 aa20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 FNIP2Q9P278 1114 aa20.57■□□□□ 0.88
CHMP2B-204ENST00000472024 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.56■□□□□ 0.88
CHMP2B-204ENST00000472024 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.56■□□□□ 0.88
CHMP2B-204ENST00000472024 USP27XA6NNY8 438 aa20.56■□□□□ 0.88
CHMP2B-204ENST00000472024 XPO1O14980 1071 aaKnown RBP20.56■□□□□ 0.88
CHMP2B-204ENST00000472024 CTSAP10619 480 aa20.56■□□□□ 0.88
CHMP2B-204ENST00000472024 NPR3P17342 541 aa20.56■□□□□ 0.88
CHMP2B-204ENST00000472024 RABGGTBP53611 331 aa20.56■□□□□ 0.88
CHMP2B-204ENST00000472024 CREMQ03060 361 aa20.56■□□□□ 0.88
CHMP2B-204ENST00000472024 PDCLQ13371 301 aa20.56■□□□□ 0.88
CHMP2B-204ENST00000472024 RSPO2Q6UXX9 243 aaPredicted RBP20.56■□□□□ 0.88
CHMP2B-204ENST00000472024 C4orf50Q6ZRC1 276 aa20.56■□□□□ 0.88
CHMP2B-204ENST00000472024 PASD1Q8IV76 773 aa20.56■□□□□ 0.88
CHMP2B-204ENST00000472024 SECISBP2LQ93073 1101 aaKnown RBP20.56■□□□□ 0.88
CHMP2B-204ENST00000472024 SMARCD1Q96GM5 515 aa20.56■□□□□ 0.88
CHMP2B-204ENST00000472024 B3GALT6Q96L58 329 aa20.56■□□□□ 0.88
CHMP2B-204ENST00000472024 HSFY1Q96LI6 401 aa20.56■□□□□ 0.88
CHMP2B-204ENST00000472024 NOX5Q96PH1 765 aa20.56■□□□□ 0.88
CHMP2B-204ENST00000472024 PNPLA8Q9NP80 782 aa20.56■□□□□ 0.88
CHMP2B-204ENST00000472024 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.56■□□□□ 0.88
CHMP2B-204ENST00000472024 SSX2IPQ9Y2D8 614 aa20.56■□□□□ 0.88
CHMP2B-204ENST00000472024 IRAK3Q9Y616 596 aa20.56■□□□□ 0.88
CHMP2B-204ENST00000472024 PDE4DIPQ5VU43 2346 aa20.56■□□□□ 0.88
CHMP2B-204ENST00000472024 TCRBV5S1A1TA0A578 114 aa20.55■□□□□ 0.88
CHMP2B-204ENST00000472024 GRXCR1A8MXD5 290 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms