RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 VCAM1P19320 739 aa4.4□□□□□ -1.71
PRPF40A-207ENST00000471701 LIPAP38571 399 aa4.4□□□□□ -1.71
PRPF40A-207ENST00000471701 MMP13P45452 471 aa4.4□□□□□ -1.71
PRPF40A-207ENST00000471701 ZNF134P52741 427 aa4.4□□□□□ -1.71
PRPF40A-207ENST00000471701 EXOSC9Q06265 439 aaKnown RBP4.4□□□□□ -1.71
PRPF40A-207ENST00000471701 GTF2H3Q13889 308 aa4.4□□□□□ -1.71
PRPF40A-207ENST00000471701 ETFDHQ16134 617 aa4.4□□□□□ -1.71
PRPF40A-207ENST00000471701 KHDC1LQ5JSQ8 128 aa4.4□□□□□ -1.71
PRPF40A-207ENST00000471701 CEP78Q5JTW2 689 aa4.4□□□□□ -1.71
PRPF40A-207ENST00000471701 ARHGAP40Q5TG30 622 aa4.4□□□□□ -1.71
PRPF40A-207ENST00000471701 NAPRTQ6XQN6 538 aa4.4□□□□□ -1.71
PRPF40A-207ENST00000471701 MAVSQ7Z434 540 aa4.4□□□□□ -1.71
PRPF40A-207ENST00000471701 XAGE5Q8WWM1 108 aa4.4□□□□□ -1.71
PRPF40A-207ENST00000471701 ZBTB9Q96C00 473 aa4.4□□□□□ -1.71
PRPF40A-207ENST00000471701 SH2D3AQ9BRG2 576 aa4.4□□□□□ -1.71
PRPF40A-207ENST00000471701 PLEKHM1Q9Y4G2 1056 aa4.4□□□□□ -1.71
PRPF40A-207ENST00000471701 CADPSQ9ULU8 1353 aa4.4□□□□□ -1.71
PRPF40A-207ENST00000471701 TISP43B9A030 160 aa4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 MYO1CO00159 1063 aa4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 TP73O15350 636 aa4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 MOSPD3O75425 235 aa4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 FESP07332 822 aa4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 NHLRC4P0CG21 123 aaPredicted RBP4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 AKAP5P24588 427 aa4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 PPIFP30405 207 aaKnown RBP4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 PLCD1P51178 756 aa4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 CLCN2P51788 898 aa4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 LILRA4P59901 499 aa4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 MAPK7Q13164 816 aa4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 KLF9Q13886 244 aaPredicted RBP4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 MIS18BP1Q6P0N0 1132 aa4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 ZNF66Q6ZN08 573 aa4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 CATSPERGQ6ZRH7 1159 aa4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 PNLDC1Q8NA58 520 aaKnown RBP4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 C9orf106Q8NAJ2 232 aa4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 RP9Q8TA86 221 aaKnown RBP4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 HSPBAP1Q96EW2 488 aa4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 CDK5RAP3Q96JB5 506 aa4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 ASB2Q96Q27 587 aa4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 CNNM1Q9NRU3 951 aa4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 PCDHA6Q9UN73 950 aa4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 ADAMTS5Q9UNA0 930 aa4.39□□□□□ -1.71
PRPF40A-207ENST00000471701 A1L4Q6 167 aa4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 DCLK1O15075 740 aa4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 UNC5CO95185 931 aa4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 GRPP07492 148 aa4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 DLDP09622 509 aaKnown RBP4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 PCSK6P29122 969 aa4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 SOX8P57073 446 aa4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 GPSM2P81274 684 aa4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 SP2Q02086 613 aa4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 PLS1Q14651 629 aa4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 PXDC1Q5TGL8 231 aa4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 EMC10Q5UCC4 262 aa4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 RGS7BPQ6MZT1 257 aaPredicted RBP4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 TRIM72Q6ZMU5 477 aa4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 CHSY1Q86X52 802 aa4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 CNGA4Q8IV77 575 aa4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 ABHD11Q8NFV4 315 aa4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 GLG1Q92896 1179 aa4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 MTFMTQ96DP5 389 aaKnown RBP4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 DAZAP1Q96EP5 407 aaKnown RBP4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 SLC35A4Q96G79 324 aa4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 DPCDQ9BVM2 203 aaPredicted RBP4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 ASPSCR1Q9BZE9 553 aa4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 ANLNQ9NQW6 1124 aa4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 TFCP2L1Q9NZI6 479 aa4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 NDRG4Q9ULP0 352 aaKnown RBP4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 SHOC2Q9UQ13 582 aa4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 SSX2IPQ9Y2D8 614 aa4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 LUC7L2Q9Y383 392 aaKnown RBP4.38□□□□□ -1.71
PRPF40A-207ENST00000471701 KCNU1A8MYU2 1149 aa4.37□□□□□ -1.71
PRPF40A-207ENST00000471701 MYO1FO00160 1098 aa4.37□□□□□ -1.71
PRPF40A-207ENST00000471701 PPEF2O14830 753 aa4.37□□□□□ -1.71
PRPF40A-207ENST00000471701 THP07101 528 aa4.37□□□□□ -1.71
PRPF40A-207ENST00000471701 CYP2C9P11712 490 aa4.37□□□□□ -1.71
PRPF40A-207ENST00000471701 XRCC6P12956 609 aaKnown RBP eCLIP4.37□□□□□ -1.71
PRPF40A-207ENST00000471701 LRPAP1P30533 357 aa4.37□□□□□ -1.71
PRPF40A-207ENST00000471701 CYP4F2P78329 520 aa4.37□□□□□ -1.71
PRPF40A-207ENST00000471701 NKX6-1P78426 367 aaPredicted RBP4.37□□□□□ -1.71
PRPF40A-207ENST00000471701 SUPT20HL1Q3ZLR7 823 aa4.37□□□□□ -1.71
PRPF40A-207ENST00000471701 CERKLQ49MI3 558 aaPredicted RBP4.37□□□□□ -1.71
PRPF40A-207ENST00000471701 SLC2A7Q6PXP3 512 aa4.37□□□□□ -1.71
PRPF40A-207ENST00000471701 MTHFD1LQ6UB35 978 aa4.37□□□□□ -1.71
PRPF40A-207ENST00000471701 CATIPQ7Z7H3 387 aa4.37□□□□□ -1.71
PRPF40A-207ENST00000471701 ZBTB46Q86UZ6 589 aa4.37□□□□□ -1.71
PRPF40A-207ENST00000471701 CYP2W1Q8TAV3 490 aa4.37□□□□□ -1.71
PRPF40A-207ENST00000471701 ATG4AQ8WYN0 398 aa4.37□□□□□ -1.71
PRPF40A-207ENST00000471701 R3HDM4Q96D70 268 aa4.37□□□□□ -1.71
PRPF40A-207ENST00000471701 MVB12AQ96EY5 273 aa4.37□□□□□ -1.71
PRPF40A-207ENST00000471701 C5orf34Q96MH7 638 aa4.37□□□□□ -1.71
PRPF40A-207ENST00000471701 FSD1LQ9BXM9 530 aa4.37□□□□□ -1.71
PRPF40A-207ENST00000471701 XPR1Q9UBH6 696 aa4.37□□□□□ -1.71
PRPF40A-207ENST00000471701 TMX2Q9Y320 296 aa4.37□□□□□ -1.71
PRPF40A-207ENST00000471701 SMIM35A0A1B0GVV1 85 aa4.36□□□□□ -1.71
PRPF40A-207ENST00000471701 EXOC3O60645 756 aa4.36□□□□□ -1.71
PRPF40A-207ENST00000471701 VIPR2P41587 438 aa4.36□□□□□ -1.71
PRPF40A-207ENST00000471701 CCT4P50991 539 aaKnown RBP4.36□□□□□ -1.71
PRPF40A-207ENST00000471701 TPTEP56180 551 aa4.36□□□□□ -1.71
PRPF40A-207ENST00000471701 TRIP6Q15654 476 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms