RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 CXCL14O95715 111 aa20.37■□□□□ 0.85
PSPC1-203ENST00000471658 CA8P35219 290 aa20.37■□□□□ 0.85
PSPC1-203ENST00000471658 SMAD3P84022 425 aaKnown RBP20.37■□□□□ 0.85
PSPC1-203ENST00000471658 CYP27A1Q02318 531 aa20.37■□□□□ 0.85
PSPC1-203ENST00000471658 PTPN14Q15678 1187 aa20.37■□□□□ 0.85
PSPC1-203ENST00000471658 LCLAT1Q6UWP7 414 aa20.37■□□□□ 0.85
PSPC1-203ENST00000471658 ZNF677Q86XU0 584 aa20.37■□□□□ 0.85
PSPC1-203ENST00000471658 WDTC1Q8N5D0 677 aa20.37■□□□□ 0.85
PSPC1-203ENST00000471658 TIFAQ96CG3 184 aa20.37■□□□□ 0.85
PSPC1-203ENST00000471658 PGLYRP2Q96PD5 576 aa20.37■□□□□ 0.85
PSPC1-203ENST00000471658 PDCL3Q9H2J4 239 aa20.37■□□□□ 0.85
PSPC1-203ENST00000471658 MRPL17Q9NRX2 175 aaKnown RBP20.37■□□□□ 0.85
PSPC1-203ENST00000471658 TAS2R14Q9NYV8 317 aa20.37■□□□□ 0.85
PSPC1-203ENST00000471658 LZTS1Q9Y250 596 aa20.37■□□□□ 0.85
PSPC1-203ENST00000471658 BACE2Q9Y5Z0 518 aa20.37■□□□□ 0.85
PSPC1-203ENST00000471658 TMCO5BA8MYB1 307 aa20.36■□□□□ 0.85
PSPC1-203ENST00000471658 H3BNC9 293 aa20.36■□□□□ 0.85
PSPC1-203ENST00000471658 ZNF263O14978 683 aa20.36■□□□□ 0.85
PSPC1-203ENST00000471658 MED7O43513 233 aa20.36■□□□□ 0.85
PSPC1-203ENST00000471658 AKR1B10O60218 316 aa20.36■□□□□ 0.85
PSPC1-203ENST00000471658 OR1D2P34982 312 aa20.36■□□□□ 0.85
PSPC1-203ENST00000471658 IRS1P35568 1242 aa20.36■□□□□ 0.85
PSPC1-203ENST00000471658 KIF11P52732 1056 aa20.36■□□□□ 0.85
PSPC1-203ENST00000471658 TTC30AQ86WT1 665 aa20.36■□□□□ 0.85
PSPC1-203ENST00000471658 DCP1BQ8IZD4 617 aaKnown RBP20.36■□□□□ 0.85
PSPC1-203ENST00000471658 CCDC112Q8NEF3 446 aa20.36■□□□□ 0.85
PSPC1-203ENST00000471658 HNRNPABQ99729 332 aaKnown RBP20.36■□□□□ 0.85
PSPC1-203ENST00000471658 TCF25Q9BQ70 676 aa20.36■□□□□ 0.85
PSPC1-203ENST00000471658 MED10Q9BTT4 135 aa20.36■□□□□ 0.85
PSPC1-203ENST00000471658 ZNF518BQ9C0D4 1074 aa20.36■□□□□ 0.85
PSPC1-203ENST00000471658 PCDHGC3Q9UN70 934 aa20.36■□□□□ 0.85
PSPC1-203ENST00000471658 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.36■□□□□ 0.85
PSPC1-203ENST00000471658 M0QYV0 167 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 RFXAPO00287 272 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 TULP2O00295 520 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 CPB1P15086 417 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 CACNA2D1P54289 1103 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 BMS1Q14692 1282 aaKnown RBP20.35■□□□□ 0.85
PSPC1-203ENST00000471658 PLPP4Q5VZY2 271 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 SLC8B1Q6J4K2 584 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 RNF19BQ6ZMZ0 732 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 DNAI2Q9GZS0 605 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 ENTPD7Q9NQZ7 604 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 CYTH4Q9UIA0 394 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 EPN1Q9Y6I3 576 aaPredicted RBP20.35■□□□□ 0.85
PSPC1-203ENST00000471658 HIDE1A8MVS5 230 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 VNN2O95498 520 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 CYP1A1P04798 512 aaPredicted RBP20.35■□□□□ 0.85
PSPC1-203ENST00000471658 BDNFP23560 247 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 ROR1Q01973 937 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 PKDCCQ504Y2 493 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 TOGARAM2Q6ZUX3 1019 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 FAM35AQ86V20 835 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 CCDC170Q8IYT3 715 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 ATAD1Q8NBU5 361 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 GDPD5Q8WTR4 605 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 CPA5Q8WXQ8 436 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 DESI2Q9BSY9 194 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 RXFP1Q9HBX9 757 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 TLR9Q9NR96 1032 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 TMEM30AQ9NV96 361 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 STK39Q9UEW8 545 aa20.35■□□□□ 0.85
PSPC1-203ENST00000471658 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.34■□□□□ 0.85
PSPC1-203ENST00000471658 WDR27A2RRH5 827 aa20.34■□□□□ 0.85
PSPC1-203ENST00000471658 TEX28O15482 410 aa20.34■□□□□ 0.85
PSPC1-203ENST00000471658 ARHGAP6O43182 974 aa20.34■□□□□ 0.85
PSPC1-203ENST00000471658 BEST1O76090 585 aa20.34■□□□□ 0.85
PSPC1-203ENST00000471658 NDUFA10O95299 355 aa20.34■□□□□ 0.85
PSPC1-203ENST00000471658 CNPP09543 421 aaKnown RBP20.34■□□□□ 0.85
PSPC1-203ENST00000471658 NOMO3P69849 1222 aa20.34■□□□□ 0.85
PSPC1-203ENST00000471658 UBE3AQ05086 875 aa20.34■□□□□ 0.85
PSPC1-203ENST00000471658 GPR17Q13304 367 aa20.34■□□□□ 0.85
PSPC1-203ENST00000471658 SLC18A3Q16572 532 aa20.34■□□□□ 0.85
PSPC1-203ENST00000471658 CLEC16AQ2KHT3 1053 aa20.34■□□□□ 0.85
PSPC1-203ENST00000471658 NAA35Q5VZE5 725 aa20.34■□□□□ 0.85
PSPC1-203ENST00000471658 VPS36Q86VN1 386 aa20.34■□□□□ 0.85
PSPC1-203ENST00000471658 ANKRD52Q8NB46 1076 aa20.34■□□□□ 0.85
PSPC1-203ENST00000471658 C1orf131Q8NDD1 294 aaKnown RBP20.34■□□□□ 0.85
PSPC1-203ENST00000471658 ACRBPQ8NEB7 543 aa20.34■□□□□ 0.85
PSPC1-203ENST00000471658 MICAL1Q8TDZ2 1067 aa20.34■□□□□ 0.85
PSPC1-203ENST00000471658 SECISBP2LQ93073 1101 aaKnown RBP20.34■□□□□ 0.85
PSPC1-203ENST00000471658 ABI2Q9NYB9 513 aaPredicted RBP20.34■□□□□ 0.85
PSPC1-203ENST00000471658 NAGPAQ9UK23 515 aa20.34■□□□□ 0.85
PSPC1-203ENST00000471658 PYCARDQ9ULZ3 195 aa20.34■□□□□ 0.85
PSPC1-203ENST00000471658 NENFQ9UMX5 172 aa20.34■□□□□ 0.85
PSPC1-203ENST00000471658 REXO2Q9Y3B8 237 aaKnown RBP20.34■□□□□ 0.85
PSPC1-203ENST00000471658 FSCN2O14926 492 aa20.33■□□□□ 0.84
PSPC1-203ENST00000471658 UNGP13051 313 aaPredicted RBP20.33■□□□□ 0.84
PSPC1-203ENST00000471658 CYP2F1P24903 491 aa20.33■□□□□ 0.84
PSPC1-203ENST00000471658 CYLC1P35663 651 aaPredicted RBP20.33■□□□□ 0.84
PSPC1-203ENST00000471658 GPD2P43304 727 aa20.33■□□□□ 0.84
PSPC1-203ENST00000471658 PDE4CQ08493 712 aa20.33■□□□□ 0.84
PSPC1-203ENST00000471658 STILQ15468 1287 aa20.33■□□□□ 0.84
PSPC1-203ENST00000471658 CCDC122Q5T0U0 273 aa20.33■□□□□ 0.84
PSPC1-203ENST00000471658 ALKBH5Q6P6C2 394 aaKnown RBP20.33■□□□□ 0.84
PSPC1-203ENST00000471658 SPATA2LQ8IUW3 424 aaPredicted RBP20.33■□□□□ 0.84
PSPC1-203ENST00000471658 TTC9BQ8N6N2 239 aa20.33■□□□□ 0.84
PSPC1-203ENST00000471658 MRPL43Q8N983 215 aaKnown RBP20.33■□□□□ 0.84
PSPC1-203ENST00000471658 OXCT2Q9BYC2 517 aaPredicted RBP20.33■□□□□ 0.84
PSPC1-203ENST00000471658 CRISPLD1Q9H336 500 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms