RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 CSTF1Q05048 431 aaKnown RBP16.45■□□□□ 0.22
COL1A1-203ENST00000471344 SURF1Q15526 300 aa16.45■□□□□ 0.22
COL1A1-203ENST00000471344 HS2ST1Q7LGA3 356 aa16.45■□□□□ 0.22
COL1A1-203ENST00000471344 SPATA2LQ8IUW3 424 aaPredicted RBP16.45■□□□□ 0.22
COL1A1-203ENST00000471344 SCN4BQ8IWT1 228 aa16.45■□□□□ 0.22
COL1A1-203ENST00000471344 MYLPFQ96A32 169 aa16.45■□□□□ 0.22
COL1A1-203ENST00000471344 E2F7Q96AV8 911 aa16.45■□□□□ 0.22
COL1A1-203ENST00000471344 SPATA32Q96LK8 384 aa16.45■□□□□ 0.22
COL1A1-203ENST00000471344 FNBP1Q96RU3 617 aa16.45■□□□□ 0.22
COL1A1-203ENST00000471344 MMS19Q96T76 1030 aa16.45■□□□□ 0.22
COL1A1-203ENST00000471344 ABCB6Q9NP58 842 aa16.45■□□□□ 0.22
COL1A1-203ENST00000471344 RBM12Q9NTZ6 932 aaKnown RBP16.45■□□□□ 0.22
COL1A1-203ENST00000471344 EXOC1Q9NV70 894 aa16.45■□□□□ 0.22
COL1A1-203ENST00000471344 GREB1Q4ZG55 1949 aa16.45■□□□□ 0.22
COL1A1-203ENST00000471344 DPYSL4O14531 572 aa16.44■□□□□ 0.22
COL1A1-203ENST00000471344 WARSP23381 471 aaKnown RBP16.44■□□□□ 0.22
COL1A1-203ENST00000471344 CMA1P23946 247 aa16.44■□□□□ 0.22
COL1A1-203ENST00000471344 PCSK1P29120 753 aa16.44■□□□□ 0.22
COL1A1-203ENST00000471344 NDUFA8P51970 172 aa16.44■□□□□ 0.22
COL1A1-203ENST00000471344 MYL6P60660 151 aa16.44■□□□□ 0.22
COL1A1-203ENST00000471344 GAS6Q14393 721 aa16.44■□□□□ 0.22
COL1A1-203ENST00000471344 FAM171BQ6P995 826 aa16.44■□□□□ 0.22
COL1A1-203ENST00000471344 C12orf56Q8IXR9 622 aa16.44■□□□□ 0.22
COL1A1-203ENST00000471344 CMTM8Q8IZV2 173 aa16.44■□□□□ 0.22
COL1A1-203ENST00000471344 BPIFB1Q8TDL5 484 aa16.44■□□□□ 0.22
COL1A1-203ENST00000471344 CSGALNACT1Q8TDX6 532 aa16.44■□□□□ 0.22
COL1A1-203ENST00000471344 USP13Q92995 863 aaPredicted RBP16.44■□□□□ 0.22
COL1A1-203ENST00000471344 SLC22A12Q96S37 553 aa16.44■□□□□ 0.22
COL1A1-203ENST00000471344 NELL2Q99435 816 aa16.44■□□□□ 0.22
COL1A1-203ENST00000471344 XYLT2Q9H1B5 865 aa16.44■□□□□ 0.22
COL1A1-203ENST00000471344 GOLPH3LQ9H4A5 285 aa16.44■□□□□ 0.22
COL1A1-203ENST00000471344 DPEP3Q9H4B8 488 aa16.44■□□□□ 0.22
COL1A1-203ENST00000471344 GDPD2Q9HCC8 539 aa16.44■□□□□ 0.22
COL1A1-203ENST00000471344 MRPS17Q9Y2R5 130 aaKnown RBP16.44■□□□□ 0.22
COL1A1-203ENST00000471344 R3HCC1Q9Y3T6 440 aaKnown RBP16.44■□□□□ 0.22
COL1A1-203ENST00000471344 SPTBN4Q9H254 2564 aa16.44■□□□□ 0.22
COL1A1-203ENST00000471344 ZNF638Q14966 1978 aaKnown RBP16.44■□□□□ 0.22
COL1A1-203ENST00000471344 PTPRZ1P23471 2315 aaPredicted RBP16.44■□□□□ 0.22
COL1A1-203ENST00000471344 ANAPC1Q9H1A4 1944 aa16.43■□□□□ 0.22
COL1A1-203ENST00000471344 LRRIQ3A6PVS8 624 aaPredicted RBP16.43■□□□□ 0.22
COL1A1-203ENST00000471344 MAN2B1O00754 1011 aa16.43■□□□□ 0.22
COL1A1-203ENST00000471344 EXOC3O60645 756 aa16.43■□□□□ 0.22
COL1A1-203ENST00000471344 NOL4O94818 638 aa16.43■□□□□ 0.22
COL1A1-203ENST00000471344 CSH1P0DML2 217 aa16.43■□□□□ 0.22
COL1A1-203ENST00000471344 CSH2P0DML3 217 aa16.43■□□□□ 0.22
COL1A1-203ENST00000471344 BDNFP23560 247 aa16.43■□□□□ 0.22
COL1A1-203ENST00000471344 HOXC13P31276 330 aa16.43■□□□□ 0.22
COL1A1-203ENST00000471344 KPNA1P52294 538 aaPredicted RBP16.43■□□□□ 0.22
COL1A1-203ENST00000471344 CACNA2D1P54289 1103 aa16.43■□□□□ 0.22
COL1A1-203ENST00000471344 KRT85P78386 507 aa16.43■□□□□ 0.22
COL1A1-203ENST00000471344 CFAP221Q4G0U5 840 aa16.43■□□□□ 0.22
COL1A1-203ENST00000471344 MDH1BQ5I0G3 518 aa16.43■□□□□ 0.22
COL1A1-203ENST00000471344 TDRD10Q5VZ19 366 aaKnown RBP16.43■□□□□ 0.22
COL1A1-203ENST00000471344 TRIM68Q6AZZ1 485 aa16.43■□□□□ 0.22
COL1A1-203ENST00000471344 Q6ZS52 159 aa16.43■□□□□ 0.22
COL1A1-203ENST00000471344 SPATA18Q8TC71 538 aa16.43■□□□□ 0.22
COL1A1-203ENST00000471344 CHRDQ9H2X0 955 aa16.43■□□□□ 0.22
COL1A1-203ENST00000471344 KCTD10Q9H3F6 313 aa16.43■□□□□ 0.22
COL1A1-203ENST00000471344 LMAN1LQ9HAT1 526 aa16.43■□□□□ 0.22
COL1A1-203ENST00000471344 PRMT8Q9NR22 394 aaPredicted RBP16.43■□□□□ 0.22
COL1A1-203ENST00000471344 TMEM30AQ9NV96 361 aa16.43■□□□□ 0.22
COL1A1-203ENST00000471344 CDH9Q9ULB4 789 aa16.43■□□□□ 0.22
COL1A1-203ENST00000471344 GPR179Q6PRD1 2367 aa16.42■□□□□ 0.22
COL1A1-203ENST00000471344 OTOL1A6NHN0 477 aaPredicted RBP16.42■□□□□ 0.22
COL1A1-203ENST00000471344 SPECC1L-ADORA2AF8WAN1 911 aa16.42■□□□□ 0.22
COL1A1-203ENST00000471344 NCAM2O15394 837 aa16.42■□□□□ 0.22
COL1A1-203ENST00000471344 LMNAP02545 664 aaKnown RBP16.42■□□□□ 0.22
COL1A1-203ENST00000471344 CHRNB1P11230 501 aa16.42■□□□□ 0.22
COL1A1-203ENST00000471344 WEE1P30291 646 aa16.42■□□□□ 0.22
COL1A1-203ENST00000471344 CTHP32929 405 aa16.42■□□□□ 0.22
COL1A1-203ENST00000471344 MAGEA9P43362 315 aa16.42■□□□□ 0.22
COL1A1-203ENST00000471344 RAP1GAPP47736 663 aa16.42■□□□□ 0.22
COL1A1-203ENST00000471344 USP46P62068 366 aa16.42■□□□□ 0.22
COL1A1-203ENST00000471344 SNRPFP62306 86 aaKnown RBP16.42■□□□□ 0.22
COL1A1-203ENST00000471344 RPL10AP62906 217 aaKnown RBP16.42■□□□□ 0.22
COL1A1-203ENST00000471344 DLG4P78352 724 aa16.42■□□□□ 0.22
COL1A1-203ENST00000471344 CYP27A1Q02318 531 aa16.42■□□□□ 0.22
COL1A1-203ENST00000471344 WDR72Q3MJ13 1102 aa16.42■□□□□ 0.22
COL1A1-203ENST00000471344 ARHGAP29Q52LW3 1261 aa16.42■□□□□ 0.22
COL1A1-203ENST00000471344 DPH6Q7L8W6 267 aa16.42■□□□□ 0.22
COL1A1-203ENST00000471344 CHFRQ96EP1 664 aa16.42■□□□□ 0.22
COL1A1-203ENST00000471344 PCED1BQ96HM7 432 aa16.42■□□□□ 0.22
COL1A1-203ENST00000471344 SMYD3Q9H7B4 428 aa16.42■□□□□ 0.22
COL1A1-203ENST00000471344 TRPC7Q9HCX4 862 aa16.42■□□□□ 0.22
COL1A1-203ENST00000471344 HPS4Q9NQG7 708 aa16.42■□□□□ 0.22
COL1A1-203ENST00000471344 DMAC2Q9NW81 257 aa16.42■□□□□ 0.22
COL1A1-203ENST00000471344 C2orf42Q9NWW7 574 aa16.42■□□□□ 0.22
COL1A1-203ENST00000471344 OBP2AQ9NY56 170 aa16.42■□□□□ 0.22
COL1A1-203ENST00000471344 NXF1Q9UBU9 619 aaKnown RBP16.42■□□□□ 0.22
COL1A1-203ENST00000471344 FBXO4Q9UKT5 387 aa16.42■□□□□ 0.22
COL1A1-203ENST00000471344 EP300Q09472 2414 aaPredicted RBP16.42■□□□□ 0.22
COL1A1-203ENST00000471344 DNAH14Q0VDD8 3507 aa16.41■□□□□ 0.22
COL1A1-203ENST00000471344 C2orf78A6NCI8 922 aa16.41■□□□□ 0.22
COL1A1-203ENST00000471344 VNN1O95497 513 aa16.41■□□□□ 0.22
COL1A1-203ENST00000471344 RPN1P04843 607 aaKnown RBP16.41■□□□□ 0.22
COL1A1-203ENST00000471344 TDGF1P13385 188 aa16.41■□□□□ 0.22
COL1A1-203ENST00000471344 ARSAP15289 507 aa16.41■□□□□ 0.22
COL1A1-203ENST00000471344 AVPR1AP37288 418 aa16.41■□□□□ 0.22
COL1A1-203ENST00000471344 SYKP43405 635 aa16.41■□□□□ 0.22
COL1A1-203ENST00000471344 PON2Q15165 354 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms