RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 KCNE1P15382 129 aa18.53■□□□□ 0.56
HSPG2-208ENST00000471322 MCM3P25205 808 aa18.53■□□□□ 0.56
HSPG2-208ENST00000471322 TNNC1P63316 161 aa18.53■□□□□ 0.56
HSPG2-208ENST00000471322 NOMO3P69849 1222 aa18.53■□□□□ 0.56
HSPG2-208ENST00000471322 C1QBPQ07021 282 aaKnown RBP18.53■□□□□ 0.56
HSPG2-208ENST00000471322 CLUL1Q15846 466 aa18.53■□□□□ 0.56
HSPG2-208ENST00000471322 XKR4Q5GH76 650 aa18.53■□□□□ 0.56
HSPG2-208ENST00000471322 SCARA5Q6ZMJ2 495 aa18.53■□□□□ 0.56
HSPG2-208ENST00000471322 ZNF280BQ86YH2 543 aa18.53■□□□□ 0.56
HSPG2-208ENST00000471322 HACE1Q8IYU2 909 aa18.53■□□□□ 0.56
HSPG2-208ENST00000471322 MMGT1Q8N4V1 131 aa18.53■□□□□ 0.56
HSPG2-208ENST00000471322 LRRC52Q8N7C0 313 aa18.53■□□□□ 0.56
HSPG2-208ENST00000471322 TMEM35BQ8NCS4 154 aa18.53■□□□□ 0.56
HSPG2-208ENST00000471322 SPATA4Q8NEY3 305 aa18.53■□□□□ 0.56
HSPG2-208ENST00000471322 ZNF564Q8TBZ8 553 aaPredicted RBP18.53■□□□□ 0.56
HSPG2-208ENST00000471322 CPA5Q8WXQ8 436 aa18.53■□□□□ 0.56
HSPG2-208ENST00000471322 GAS2L1Q99501 681 aaPredicted RBP18.53■□□□□ 0.56
HSPG2-208ENST00000471322 MIOSQ9NXC5 875 aa18.53■□□□□ 0.56
HSPG2-208ENST00000471322 PACSIN2Q9UNF0 486 aaPredicted RBP18.53■□□□□ 0.56
HSPG2-208ENST00000471322 ALG6Q9Y672 507 aa18.53■□□□□ 0.56
HSPG2-208ENST00000471322 MYO7AQ13402 2215 aa18.53■□□□□ 0.56
HSPG2-208ENST00000471322 LPXNO60711 386 aa18.52■□□□□ 0.56
HSPG2-208ENST00000471322 CALCAP01258 141 aa18.52■□□□□ 0.56
HSPG2-208ENST00000471322 SCNN1GP51170 649 aa18.52■□□□□ 0.56
HSPG2-208ENST00000471322 UBL4BQ8N7F7 174 aa18.52■□□□□ 0.56
HSPG2-208ENST00000471322 KLHL23Q8NBE8 558 aa18.52■□□□□ 0.56
HSPG2-208ENST00000471322 NOA1Q8NC60 698 aaKnown RBP18.52■□□□□ 0.56
HSPG2-208ENST00000471322 ACTRT1Q8TDG2 376 aa18.52■□□□□ 0.56
HSPG2-208ENST00000471322 PPM1EQ8WY54 764 aa18.52■□□□□ 0.56
HSPG2-208ENST00000471322 PARD6BQ9BYG5 372 aa18.52■□□□□ 0.56
HSPG2-208ENST00000471322 MRPL47Q9HD33 250 aaKnown RBP18.52■□□□□ 0.56
HSPG2-208ENST00000471322 ADAM22Q9P0K1 906 aa18.52■□□□□ 0.56
HSPG2-208ENST00000471322 DNAJB4Q9UDY4 337 aa18.52■□□□□ 0.56
HSPG2-208ENST00000471322 KIAA1257Q9ULG3 409 aa18.52■□□□□ 0.56
HSPG2-208ENST00000471322 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.52■□□□□ 0.56
HSPG2-208ENST00000471322 NLRC5Q86WI3 1866 aa18.52■□□□□ 0.56
HSPG2-208ENST00000471322 MYH10P35580 1976 aa18.52■□□□□ 0.56
HSPG2-208ENST00000471322 TARSL2A2RTX5 802 aaKnown RBP18.52■□□□□ 0.55
HSPG2-208ENST00000471322 GPM6BQ13491 265 aa18.52■□□□□ 0.55
HSPG2-208ENST00000471322 BRD3Q15059 726 aa18.52■□□□□ 0.55
HSPG2-208ENST00000471322 FBXO38Q6PIJ6 1188 aa18.52■□□□□ 0.55
HSPG2-208ENST00000471322 MON1BQ7L1V2 547 aa18.52■□□□□ 0.55
HSPG2-208ENST00000471322 COLGALT1Q8NBJ5 622 aa18.52■□□□□ 0.55
HSPG2-208ENST00000471322 URGCPQ8TCY9 931 aa18.52■□□□□ 0.55
HSPG2-208ENST00000471322 LHX5Q9H2C1 402 aa18.52■□□□□ 0.55
HSPG2-208ENST00000471322 GOLPH3Q9H4A6 298 aa18.52■□□□□ 0.55
HSPG2-208ENST00000471322 LCMT1Q9UIC8 334 aa18.52■□□□□ 0.55
HSPG2-208ENST00000471322 SCINQ9Y6U3 715 aa18.52■□□□□ 0.55
HSPG2-208ENST00000471322 KIAA1671Q9BY89 1806 aa18.51■□□□□ 0.55
HSPG2-208ENST00000471322 GRM6O15303 877 aa18.51■□□□□ 0.55
HSPG2-208ENST00000471322 CILPO75339 1184 aa18.51■□□□□ 0.55
HSPG2-208ENST00000471322 DDHD2O94830 711 aa18.51■□□□□ 0.55
HSPG2-208ENST00000471322 CALB1P05937 261 aa18.51■□□□□ 0.55
HSPG2-208ENST00000471322 CYP3A5P20815 502 aa18.51■□□□□ 0.55
HSPG2-208ENST00000471322 CDH5P33151 784 aaPredicted RBP18.51■□□□□ 0.55
HSPG2-208ENST00000471322 DNA2P51530 1060 aa18.51■□□□□ 0.55
HSPG2-208ENST00000471322 CCDC85BQ15834 202 aaPredicted RBP18.51■□□□□ 0.55
HSPG2-208ENST00000471322 ZMAT2Q96NC0 199 aaKnown RBP18.51■□□□□ 0.55
HSPG2-208ENST00000471322 MRPL9Q9BYD2 267 aaKnown RBP18.51■□□□□ 0.55
HSPG2-208ENST00000471322 NRDE2Q9H7Z3 1164 aa18.51■□□□□ 0.55
HSPG2-208ENST00000471322 ANKZF1Q9H8Y5 726 aa18.51■□□□□ 0.55
HSPG2-208ENST00000471322 CACNG4Q9UBN1 327 aa18.51■□□□□ 0.55
HSPG2-208ENST00000471322 BARX2Q9UMQ3 279 aaPredicted RBP18.51■□□□□ 0.55
HSPG2-208ENST00000471322 GIT1Q9Y2X7 761 aa18.51■□□□□ 0.55
HSPG2-208ENST00000471322 COL4A4P53420 1690 aaPredicted RBP18.5■□□□□ 0.55
HSPG2-208ENST00000471322 H3BNC9 293 aa18.5■□□□□ 0.55
HSPG2-208ENST00000471322 CEP104O60308 925 aa18.5■□□□□ 0.55
HSPG2-208ENST00000471322 ITGB1P05556 798 aa18.5■□□□□ 0.55
HSPG2-208ENST00000471322 MMP8P22894 467 aa18.5■□□□□ 0.55
HSPG2-208ENST00000471322 PNPLA4P41247 253 aa18.5■□□□□ 0.55
HSPG2-208ENST00000471322 RAD23BP54727 409 aa18.5■□□□□ 0.55
HSPG2-208ENST00000471322 BCAR1P56945 870 aa18.5■□□□□ 0.55
HSPG2-208ENST00000471322 INCA1Q0VD86 236 aa18.5■□□□□ 0.55
HSPG2-208ENST00000471322 MESDQ14696 234 aa18.5■□□□□ 0.55
HSPG2-208ENST00000471322 ZNF394Q53GI3 561 aa18.5■□□□□ 0.55
HSPG2-208ENST00000471322 GLE1Q53GS7 698 aaKnown RBP18.5■□□□□ 0.55
HSPG2-208ENST00000471322 GLRA4Q5JXX5 417 aa18.5■□□□□ 0.55
HSPG2-208ENST00000471322 KCNT2Q6UVM3 1135 aa18.5■□□□□ 0.55
HSPG2-208ENST00000471322 GSTCDQ8NEC7 633 aa18.5■□□□□ 0.55
HSPG2-208ENST00000471322 RUBCNQ92622 972 aa18.5■□□□□ 0.55
HSPG2-208ENST00000471322 TMEM176AQ96HP8 235 aa18.5■□□□□ 0.55
HSPG2-208ENST00000471322 SAMD11Q96NU1 681 aa18.5■□□□□ 0.55
HSPG2-208ENST00000471322 NAP1L3Q99457 506 aaPredicted RBP18.5■□□□□ 0.55
HSPG2-208ENST00000471322 DNAI2Q9GZS0 605 aa18.5■□□□□ 0.55
HSPG2-208ENST00000471322 CARD9Q9H257 536 aa18.5■□□□□ 0.55
HSPG2-208ENST00000471322 SMYD3Q9H7B4 428 aa18.5■□□□□ 0.55
HSPG2-208ENST00000471322 UBN1Q9NPG3 1134 aa18.5■□□□□ 0.55
HSPG2-208ENST00000471322 RAB21Q9UL25 225 aa18.5■□□□□ 0.55
HSPG2-208ENST00000471322 TTC7AQ9ULT0 858 aaPredicted RBP18.5■□□□□ 0.55
HSPG2-208ENST00000471322 PCDHB12Q9Y5F1 795 aa18.5■□□□□ 0.55
HSPG2-208ENST00000471322 SMIM28A0A1B0GU29 152 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 PGRMC1O00264 195 aaKnown RBP18.49■□□□□ 0.55
HSPG2-208ENST00000471322 RHOXF2BP0C7M4 288 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 CD19P15391 556 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 LAG3P18627 525 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 RRM1P23921 792 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 BRD2P25440 801 aaKnown RBP18.49■□□□□ 0.55
HSPG2-208ENST00000471322 SLC1A1P43005 524 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 GUCY2FP51841 1108 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 CDH8P55286 799 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms