RNA–Protein interactions for RNA: ENST00000471247.5

CCNL1-214, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,671 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-214ENST00000471247 NSMFQ6X4W1 530 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 PPP1R21Q6ZMI0 780 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 KIF6Q6ZMV9 814 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 MIGA2Q7L4E1 593 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 SLC35F6Q8N357 371 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 SPATA20Q8TB22 786 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 SLC7A14Q8TBB6 771 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 SHKBP1Q8TBC3 707 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 XAGE3Q8WTP9 111 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 BCL7CQ8WUZ0 217 aaPredicted RBP3.03□□□□□ -1.93
CCNL1-214ENST00000471247 PRCCQ92733 491 aaPredicted RBP3.03□□□□□ -1.93
CCNL1-214ENST00000471247 TEKT1Q969V4 418 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 CCDC127Q96BQ5 260 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 VMP1Q96GC9 406 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 SCLYQ96I15 445 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 CDHR1Q96JP9 859 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 ZFYVE19Q96K21 471 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 PLEKHG4BQ96PX9 1271 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 NDNQ99608 321 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 TTC1Q99614 292 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 NAPGQ99747 312 aaPredicted RBP3.03□□□□□ -1.93
CCNL1-214ENST00000471247 NSRP1Q9H0G5 558 aaKnown RBP3.03□□□□□ -1.93
CCNL1-214ENST00000471247 LUC7LQ9NQ29 371 aaKnown RBP3.03□□□□□ -1.93
CCNL1-214ENST00000471247 DKK3Q9UBP4 350 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 ANGPTL3Q9Y5C1 460 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 CHD9Q3L8U1 2897 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 TRIM75PA6NK02 468 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 ALG1L2C9J202 215 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 GCOM1H8Y6P7 765 aaPredicted RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 FZD9O00144 591 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 MSTNO14793 375 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 CASQ2O14958 399 aaPredicted RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 MCF2LO15068 1137 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 RAB11FIP3O75154 756 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 WBP4O75554 376 aaKnown RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 LCA5LO95447 670 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 ATP2A2P16615 1042 aaKnown RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 PIP4K2AP48426 406 aaPredicted RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 CD151P48509 253 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 ROR2Q01974 943 aaKnown RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 PREPLQ4J6C6 727 aaPredicted RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 C10orf62Q5T681 223 aaPredicted RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 THOC7Q6I9Y2 204 aaKnown RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 ZCCHC8Q6NZY4 707 aaKnown RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 C11orf57Q6ZUT1 292 aaPredicted RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 STOX1Q6ZVD7 989 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 SMIM5Q71RC9 77 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 BZW1Q7L1Q6 419 aaKnown RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 SRGAP1Q7Z6B7 1085 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 REXO1L1PQ8IX06 675 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 DRAXINQ8NBI3 349 aaPredicted RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 NETO2Q8NC67 525 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 PLBD2Q8NHP8 589 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 ANKS1AQ92625 1134 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 LRRC45Q96CN5 670 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 CLIP3Q96DZ5 547 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 VPS39Q96JC1 886 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 RPS6KC1Q96S38 1066 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 DPH2Q9BQC3 489 aaPredicted RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 RIOK1Q9BRS2 568 aaKnown RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 RTFDC1Q9BY42 306 aaPredicted RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 FUT8Q9BYC5 575 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 WNT8AQ9H1J5 351 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 RC3H2Q9HBD1 1191 aaKnown RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 SSU72Q9NP77 194 aaKnown RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 TMOD2Q9NZR1 351 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 TBK1Q9UHD2 729 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 TLK1Q9UKI8 766 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 CEP290O15078 2479 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 MYO7AQ13402 2215 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 SHISA3A0PJX4 238 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 ARHGAP42A6NI28 874 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 BTBD11A6QL63 1104 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 SH2B2O14492 632 aaPredicted RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 PRODHO43272 600 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 CLASP2O75122 1294 aaKnown RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 SEC24DO94855 1032 aaPredicted RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 ZBTB48P10074 688 aaPredicted RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 ITGB5P18084 799 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 ATP5JP18859 108 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 NR1D1P20393 614 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 CTNNA1P35221 906 aaKnown RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 WASP42768 502 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 FNTBP49356 437 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 MRPL12P52815 198 aaKnown RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 ANKRD1Q15327 319 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 SLC15A2Q16348 729 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 TMEM240Q5SV17 173 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 NEK5Q6P3R8 708 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 KCNV1Q6PIU1 500 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 ADAT2Q7Z6V5 191 aaKnown RBP3.02□□□□□ -1.93
CCNL1-214ENST00000471247 NLRX1Q86UT6 975 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 MFN1Q8IWA4 741 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 NIM1KQ8IY84 436 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 TRIML2Q8N7C3 387 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 TMEM145Q8NBT3 493 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 CCDC197Q8NCU1 140 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 SUPT20HQ8NEM7 779 aa3.02□□□□□ -1.93
CCNL1-214ENST00000471247 CFAP57Q96MR6 1250 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms