RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 NDUFB7P17568 137 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 LIPAP38571 399 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 KCNJ5P48544 419 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 PXNP49023 591 aaPredicted RBP1.84□□□□□ -2.11
UBXN4-207ENST00000471246 ANAPC15P60006 121 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 SP2Q02086 613 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 SRSF4Q08170 494 aaKnown RBP1.84□□□□□ -2.11
UBXN4-207ENST00000471246 SLC10A2Q12908 348 aaPredicted RBP1.84□□□□□ -2.11
UBXN4-207ENST00000471246 BMPR2Q13873 1038 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 TMEM119Q4V9L6 283 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 KHDC1LQ5JSQ8 128 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 PLAC9Q5JTB6 97 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 ARHGAP40Q5TG30 622 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 ICE2Q659A1 982 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 SUMO4Q6EEV6 95 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 SFRP4Q6FHJ7 346 aaPredicted RBP1.84□□□□□ -2.11
UBXN4-207ENST00000471246 RGS7BPQ6MZT1 257 aaPredicted RBP1.84□□□□□ -2.11
UBXN4-207ENST00000471246 LAYNQ6UX15 382 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 ZNF804AQ7Z570 1209 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 DENND1CQ8IV53 801 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 ATG4AQ8WYN0 398 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 DDB2Q92466 427 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 DPF1Q92782 380 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 C1GALT1C1Q96EU7 318 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 MRGPRX1Q96LB2 322 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 LRGUKQ96M69 825 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 AIFM3Q96NN9 605 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 P2RX7Q99572 595 aaKnown RBP1.84□□□□□ -2.11
UBXN4-207ENST00000471246 SARS2Q9NP81 518 aaKnown RBP1.84□□□□□ -2.11
UBXN4-207ENST00000471246 ARHGEF3Q9NR81 526 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 CNNM1Q9NRU3 951 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 SERTAD4Q9NUC0 356 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 DDX56Q9NY93 547 aaKnown RBP1.84□□□□□ -2.11
UBXN4-207ENST00000471246 GABBR1Q9UBS5 961 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 CPA4Q9UI42 421 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 PNMA8BQ9ULN7 279 aaPredicted RBP1.84□□□□□ -2.11
UBXN4-207ENST00000471246 SSX2IPQ9Y2D8 614 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 MED16Q9Y2X0 877 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 PLEKHM1Q9Y4G2 1056 aa1.84□□□□□ -2.11
UBXN4-207ENST00000471246 AOX1Q06278 1338 aa1.84□□□□□ -2.12
UBXN4-207ENST00000471246 E2F8A0AVK6 867 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 TARM1B6A8C7 271 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 H3BML4 177 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 ZNF213O14771 459 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 AP1G1O43747 822 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 UBXN7O94888 489 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 FESP07332 822 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 IL6RP08887 468 aaPredicted RBP1.83□□□□□ -2.12
UBXN4-207ENST00000471246 CBSLP0DN79 551 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 NPR1P16066 1061 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 HSPA6P17066 643 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 ENGP17813 658 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 NCLP19338 710 aaKnown RBP1.83□□□□□ -2.12
UBXN4-207ENST00000471246 HTR1BP28222 390 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 CBSP35520 551 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 VIPR2P41587 438 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 ABCG1P45844 678 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 SLC11A2P49281 568 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 RAB27AP51159 221 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 UCP3P55916 312 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 TPTEP56180 551 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 TFF2Q03403 129 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 IQCB1Q15051 598 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 LLGL1Q15334 1064 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 EZH2Q15910 746 aaKnown RBP1.83□□□□□ -2.12
UBXN4-207ENST00000471246 KRTAP27-1Q3LI81 207 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 AARS2Q5JTZ9 985 aaKnown RBP1.83□□□□□ -2.12
UBXN4-207ENST00000471246 TREML2Q5T2D2 321 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 CEP85Q6P2H3 762 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 ANKRD16Q6P6B7 361 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 ZNF782Q6ZMW2 699 aaPredicted RBP1.83□□□□□ -2.12
UBXN4-207ENST00000471246 ZNF66Q6ZN08 573 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 SLC29A4Q7RTT9 530 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 C1QL2Q7Z5L3 287 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 DAAM2Q86T65 1068 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 DTX2Q86UW9 622 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 TPH2Q8IWU9 490 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 FAM177A1Q8N128 213 aaPredicted RBP1.83□□□□□ -2.12
UBXN4-207ENST00000471246 LRRC71Q8N4P6 559 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP1.83□□□□□ -2.12
UBXN4-207ENST00000471246 VGLL2Q8N8G2 317 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 ZBTB34Q8NCN2 500 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 PPP1R35Q8TAP8 253 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 JPH3Q8WXH2 748 aaPredicted RBP1.83□□□□□ -2.12
UBXN4-207ENST00000471246 TBC1D5Q92609 795 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 GLG1Q92896 1179 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 REPS1Q96D71 796 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 NT5C1BQ96P26 610 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 MOGAT1Q96PD6 335 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 TAAR9Q96RI9 348 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 ACO2Q99798 780 aaKnown RBP1.83□□□□□ -2.12
UBXN4-207ENST00000471246 PTDSS2Q9BVG9 487 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 FSD1LQ9BXM9 530 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 TRIM54Q9BYV2 358 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 CDH19Q9H159 772 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 CXorf36Q9H7Y0 433 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 GLOD4Q9HC38 313 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 DLL3Q9NYJ7 618 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 SH3BP4Q9P0V3 963 aa1.83□□□□□ -2.12
UBXN4-207ENST00000471246 XPR1Q9UBH6 696 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms