RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, human

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SND1-208	ENST00000470463	MRPL45	Q9BRJ2	306 aa	Known RBP	11.6	□□□□□ -0.55
SND1-208	ENST00000470463	RBM12	Q9NTZ6	932 aa	Known RBP	11.6	□□□□□ -0.55
SND1-208	ENST00000470463	RASAL2	Q9UJF2	1139 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	FRMPD3	Q5JV73	1810 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463		C9IYK1	514 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	GABRD	O14764	452 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	PPEF2	O14830	753 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	HOXA2	O43364	376 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	RNF8	O76064	485 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	ZRANB2	O95218	330 aa	Known RBP eCLIP	11.59	□□□□□ -0.55
SND1-208	ENST00000470463	MYC	P01106	439 aa	Predicted RBP	11.59	□□□□□ -0.55
SND1-208	ENST00000470463	CALCA	P01258	141 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	CFH	P08603	1231 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	KRT7	P08729	469 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	ODC1	P11926	461 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	CHRNA3	P32297	505 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	AARS	P49588	968 aa	Known RBP eCLIP	11.59	□□□□□ -0.55
SND1-208	ENST00000470463	CLCN6	P51797	869 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	FAM189B	P81408	668 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	SOX4	Q06945	474 aa	Predicted RBP	11.59	□□□□□ -0.55
SND1-208	ENST00000470463	TUSC3	Q13454	348 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	DHX34	Q14147	1143 aa	Known RBP	11.59	□□□□□ -0.55
SND1-208	ENST00000470463	MAPRE1	Q15691	268 aa	Known RBP	11.59	□□□□□ -0.55
SND1-208	ENST00000470463	GOLGA7B	Q2TAP0	167 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	PTPN20	Q4JDL3	420 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	PKDCC	Q504Y2	493 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	DCLRE1A	Q6PJP8	1040 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	DSTYK	Q6XUX3	929 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	TMEM110	Q86TL2	294 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	ACOT1	Q86TX2	421 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	RCOR2	Q8IZ40	523 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	GSTCD	Q8NEC7	633 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	EXD1	Q8NHP7	514 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	ALG3	Q92685	438 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	PKNOX2	Q96KN3	472 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	ZFP42	Q96MM3	310 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	MCEE	Q96PE7	176 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	SLC4A5	Q9BY07	1137 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	RAB17	Q9H0T7	212 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	TRPV6	Q9H1D0	765 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	ACBD3	Q9H3P7	528 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	ASNSD1	Q9NWL6	643 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	HMGXB4	Q9UGU5	601 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	CDH9	Q9ULB4	789 aa		11.59	□□□□□ -0.55
SND1-208	ENST00000470463	TRIP11	Q15643	1979 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	FAM187A	A6NFU0	413 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	FSCN2	O14926	492 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	TFRC	P02786	760 aa	Known RBP	11.58	□□□□□ -0.56
SND1-208	ENST00000470463	ERBB2	P04626	1255 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	CYP11A1	P05108	521 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	RPL34	P49207	117 aa	Known RBP	11.58	□□□□□ -0.56
SND1-208	ENST00000470463	FNTA	P49354	379 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	SCNN1G	P51170	649 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	GPS2	Q13227	327 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	CUL1	Q13616	776 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	UPP1	Q16831	310 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.58	□□□□□ -0.56
SND1-208	ENST00000470463	C1orf53	Q5VUE5	145 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.58	□□□□□ -0.56
SND1-208	ENST00000470463	ZNF598	Q86UK7	904 aa	Known RBP	11.58	□□□□□ -0.56
SND1-208	ENST00000470463	XYLT1	Q86Y38	959 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	FAM126B	Q8IXS8	530 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	B3GALNT2	Q8NCR0	500 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	SLC35F5	Q8WV83	523 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	KBTBD7	Q8WVZ9	684 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	SEPT8	Q92599	483 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	SENP8	Q96LD8	212 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	TOX2	Q96NM4	488 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	CPXM1	Q96SM3	734 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	HNRNPAB	Q99729	332 aa	Known RBP	11.58	□□□□□ -0.56
SND1-208	ENST00000470463	LRRC1	Q9BTT6	524 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	FAM129A	Q9BZQ8	928 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	RNF208	Q9H0X6	261 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	UNC93B1	Q9H1C4	597 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	TMEM161A	Q9NX61	479 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	L1RE1	Q9UN81	338 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	EFR3B	Q9Y2G0	817 aa		11.58	□□□□□ -0.56
SND1-208	ENST00000470463	UTP11	Q9Y3A2	253 aa	Known RBP	11.58	□□□□□ -0.56
SND1-208	ENST00000470463	KIAA0100	Q14667	2235 aa	Known RBP	11.58	□□□□□ -0.56
SND1-208	ENST00000470463	DCDC2C	A8MYV0	355 aa		11.57	□□□□□ -0.56
SND1-208	ENST00000470463	TMEM189-UBE2V1	I3L0A0	370 aa		11.57	□□□□□ -0.56
SND1-208	ENST00000470463	XPO1	O14980	1071 aa	Known RBP	11.57	□□□□□ -0.56
SND1-208	ENST00000470463	SPTLC1	O15269	473 aa		11.57	□□□□□ -0.56
SND1-208	ENST00000470463	SART1	O43290	800 aa	Known RBP	11.57	□□□□□ -0.56
SND1-208	ENST00000470463	TRAPPC3	O43617	180 aa		11.57	□□□□□ -0.56
SND1-208	ENST00000470463	MGEA5	O60502	916 aa		11.57	□□□□□ -0.56
SND1-208	ENST00000470463	PHF2	O75151	1096 aa		11.57	□□□□□ -0.56
SND1-208	ENST00000470463	CCL5	P13501	91 aa		11.57	□□□□□ -0.56
SND1-208	ENST00000470463	TYMP	P19971	482 aa		11.57	□□□□□ -0.56
SND1-208	ENST00000470463	PSMA2	P25787	234 aa		11.57	□□□□□ -0.56
SND1-208	ENST00000470463	PTPN7	P35236	360 aa		11.57	□□□□□ -0.56
SND1-208	ENST00000470463	PCK1	P35558	622 aa		11.57	□□□□□ -0.56
SND1-208	ENST00000470463	PLA2G4A	P47712	749 aa		11.57	□□□□□ -0.56
SND1-208	ENST00000470463	ZNF143	P52747	638 aa	Predicted RBP	11.57	□□□□□ -0.56
SND1-208	ENST00000470463	RBM10	P98175	930 aa	Known RBP	11.57	□□□□□ -0.56
SND1-208	ENST00000470463	PLCB3	Q01970	1234 aa		11.57	□□□□□ -0.56
SND1-208	ENST00000470463	LMNB2	Q03252	620 aa		11.57	□□□□□ -0.56
SND1-208	ENST00000470463	NNT	Q13423	1086 aa		11.57	□□□□□ -0.56
SND1-208	ENST00000470463	CYP1B1	Q16678	543 aa		11.57	□□□□□ -0.56
SND1-208	ENST00000470463	FAM102A	Q5T9C2	384 aa	Predicted RBP	11.57	□□□□□ -0.56

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