RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 RNPEPQ9H4A4 650 aa21.16■□□□□ 0.98
CDHR3-207ENST00000470188 ERAP1Q9NZ08 941 aa21.16■□□□□ 0.98
CDHR3-207ENST00000470188 L3MBTL1Q9Y468 752 aa21.16■□□□□ 0.98
CDHR3-207ENST00000470188 hCG_1818297A0A087WSY0 165 aa21.16■□□□□ 0.98
CDHR3-207ENST00000470188 LRRD1A4D1F6 860 aa21.16■□□□□ 0.98
CDHR3-207ENST00000470188 KIF3CO14782 793 aa21.16■□□□□ 0.98
CDHR3-207ENST00000470188 C22orf31O95567 290 aa21.16■□□□□ 0.98
CDHR3-207ENST00000470188 IQCF3P0C7M6 154 aa21.16■□□□□ 0.98
CDHR3-207ENST00000470188 POLR2BP30876 1174 aaKnown RBP21.16■□□□□ 0.98
CDHR3-207ENST00000470188 PTPN7P35236 360 aa21.16■□□□□ 0.98
CDHR3-207ENST00000470188 IGBP1P78318 339 aa21.16■□□□□ 0.98
CDHR3-207ENST00000470188 PTPN20Q4JDL3 420 aa21.16■□□□□ 0.98
CDHR3-207ENST00000470188 TFDP3Q5H9I0 405 aa21.16■□□□□ 0.98
CDHR3-207ENST00000470188 RELL1Q8IUW5 271 aa21.16■□□□□ 0.98
CDHR3-207ENST00000470188 LHX5Q9H2C1 402 aa21.16■□□□□ 0.98
CDHR3-207ENST00000470188 PRMT7Q9NVM4 692 aaPredicted RBP21.16■□□□□ 0.98
CDHR3-207ENST00000470188 CTNNAL1Q9UBT7 734 aa21.16■□□□□ 0.98
CDHR3-207ENST00000470188 SIX4Q9UIU6 781 aa21.16■□□□□ 0.98
CDHR3-207ENST00000470188 GOLGA8SH3BPF8 625 aa21.15■□□□□ 0.98
CDHR3-207ENST00000470188 GPR25O00155 361 aa21.15■□□□□ 0.98
CDHR3-207ENST00000470188 TCEA3O75764 348 aa21.15■□□□□ 0.98
CDHR3-207ENST00000470188 NFICP08651 508 aa21.15■□□□□ 0.98
CDHR3-207ENST00000470188 YBX3P16989 372 aaKnown RBP eCLIP21.15■□□□□ 0.98
CDHR3-207ENST00000470188 WDR72Q3MJ13 1102 aa21.15■□□□□ 0.98
CDHR3-207ENST00000470188 CEP128Q6ZU80 1094 aa21.15■□□□□ 0.98
CDHR3-207ENST00000470188 BZW1Q7L1Q6 419 aaKnown RBP21.15■□□□□ 0.98
CDHR3-207ENST00000470188 FASTKD5Q7L8L6 764 aaKnown RBP21.15■□□□□ 0.98
CDHR3-207ENST00000470188 ZCCHC9Q8N567 271 aaKnown RBP21.15■□□□□ 0.98
CDHR3-207ENST00000470188 KLHL29Q96CT2 875 aa21.15■□□□□ 0.98
CDHR3-207ENST00000470188 OPTNQ96CV9 577 aa21.15■□□□□ 0.98
CDHR3-207ENST00000470188 NFKBIZQ9BYH8 718 aa21.15■□□□□ 0.98
CDHR3-207ENST00000470188 BCO2Q9BYV7 579 aa21.15■□□□□ 0.98
CDHR3-207ENST00000470188 FOXP3Q9BZS1 431 aa21.15■□□□□ 0.98
CDHR3-207ENST00000470188 ARHGEF3Q9NR81 526 aa21.15■□□□□ 0.98
CDHR3-207ENST00000470188 ARL2BPQ9Y2Y0 163 aa21.15■□□□□ 0.98
CDHR3-207ENST00000470188 IGF2BP3O00425 579 aaKnown RBP eCLIP21.14■□□□□ 0.98
CDHR3-207ENST00000470188 PSMA2P25787 234 aa21.14■□□□□ 0.98
CDHR3-207ENST00000470188 CDKN2BP42772 138 aa21.14■□□□□ 0.98
CDHR3-207ENST00000470188 PHKA2P46019 1235 aa21.14■□□□□ 0.98
CDHR3-207ENST00000470188 ALLCQ8N6M5 410 aa21.14■□□□□ 0.98
CDHR3-207ENST00000470188 C1orf127Q8N9H9 656 aa21.14■□□□□ 0.98
CDHR3-207ENST00000470188 GLIS1Q8NBF1 620 aa21.14■□□□□ 0.98
CDHR3-207ENST00000470188 ANKRD27Q96NW4 1050 aa21.14■□□□□ 0.98
CDHR3-207ENST00000470188 DNALI1O14645 258 aaPredicted RBP21.14■□□□□ 0.97
CDHR3-207ENST00000470188 LIN7AO14910 233 aaPredicted RBP21.14■□□□□ 0.97
CDHR3-207ENST00000470188 KRT3P12035 628 aa21.14■□□□□ 0.97
CDHR3-207ENST00000470188 RFC1P35251 1148 aaPredicted RBP21.14■□□□□ 0.97
CDHR3-207ENST00000470188 CDH8P55286 799 aa21.14■□□□□ 0.97
CDHR3-207ENST00000470188 MKRN3Q13064 507 aaKnown RBP21.14■□□□□ 0.97
CDHR3-207ENST00000470188 POLNQ7Z5Q5 900 aa21.14■□□□□ 0.97
CDHR3-207ENST00000470188 HAUS1Q96CS2 278 aa21.14■□□□□ 0.97
CDHR3-207ENST00000470188 C9orf72Q96LT7 481 aa21.14■□□□□ 0.97
CDHR3-207ENST00000470188 RBM15Q96T37 977 aaKnown RBP eCLIP21.14■□□□□ 0.972e-7■■□□□ 12
CDHR3-207ENST00000470188 IFT122Q9HBG6 1241 aa21.14■□□□□ 0.97
CDHR3-207ENST00000470188 RNF181Q9P0P0 153 aa21.14■□□□□ 0.97
CDHR3-207ENST00000470188 CYTH4Q9UIA0 394 aa21.14■□□□□ 0.97
CDHR3-207ENST00000470188 DRG1Q9Y295 367 aaKnown RBP21.14■□□□□ 0.97
CDHR3-207ENST00000470188 ASB14A6NK59 587 aa21.13■□□□□ 0.97
CDHR3-207ENST00000470188 SIGLEC16A6NMB1 481 aa21.13■□□□□ 0.97
CDHR3-207ENST00000470188 LACTBL1A8MY62 500 aa21.13■□□□□ 0.97
CDHR3-207ENST00000470188 ZSCAN5DPP0CG00 497 aa21.13■□□□□ 0.97
CDHR3-207ENST00000470188 STAG3L1P0CL83 205 aa21.13■□□□□ 0.97
CDHR3-207ENST00000470188 SKIV2L2P42285 1042 aaKnown RBP21.13■□□□□ 0.97
CDHR3-207ENST00000470188 ARSEP51690 589 aa21.13■□□□□ 0.97
CDHR3-207ENST00000470188 RAD23BP54727 409 aa21.13■□□□□ 0.97
CDHR3-207ENST00000470188 VCPP55072 806 aaKnown RBP21.13■□□□□ 0.97
CDHR3-207ENST00000470188 RXFP1Q9HBX9 757 aa21.13■□□□□ 0.97
CDHR3-207ENST00000470188 TJP2Q9UDY2 1190 aa21.13■□□□□ 0.97
CDHR3-207ENST00000470188 SBF1O95248 1867 aa21.13■□□□□ 0.97
CDHR3-207ENST00000470188 MCM3APO60318 1980 aa21.13■□□□□ 0.97
CDHR3-207ENST00000470188 TCP11X1B4DZS4 312 aa21.13■□□□□ 0.97
CDHR3-207ENST00000470188 ECM2O94769 699 aaPredicted RBP21.13■□□□□ 0.97
CDHR3-207ENST00000470188 ITGB3P05106 788 aa21.13■□□□□ 0.97
CDHR3-207ENST00000470188 INSRRP14616 1297 aa21.13■□□□□ 0.97
CDHR3-207ENST00000470188 MAGEA4P43358 317 aa21.13■□□□□ 0.97
CDHR3-207ENST00000470188 CCNG1P51959 295 aa21.13■□□□□ 0.97
CDHR3-207ENST00000470188 PSMC1P62191 440 aaKnown RBP21.13■□□□□ 0.97
CDHR3-207ENST00000470188 SF3A3Q12874 501 aaKnown RBP eCLIP21.13■□□□□ 0.975e-6■■□□□ 14.3
CDHR3-207ENST00000470188 ORC1Q13415 861 aa21.13■□□□□ 0.97
CDHR3-207ENST00000470188 ZNF484Q5JVG2 852 aa21.13■□□□□ 0.97
CDHR3-207ENST00000470188 JADE1Q6IE81 842 aa21.13■□□□□ 0.97
CDHR3-207ENST00000470188 CCDC77Q9BR77 488 aa21.13■□□□□ 0.97
CDHR3-207ENST00000470188 SDCBP2Q9H190 292 aa21.13■□□□□ 0.97
CDHR3-207ENST00000470188 SMYD3Q9H7B4 428 aa21.13■□□□□ 0.97
CDHR3-207ENST00000470188 TMEM120BA0PK00 339 aa21.12■□□□□ 0.97
CDHR3-207ENST00000470188 CSDE1O75534 798 aaKnown RBP21.12■□□□□ 0.97
CDHR3-207ENST00000470188 MCF2P10911 925 aa21.12■□□□□ 0.97
CDHR3-207ENST00000470188 TNFAIP2Q03169 654 aa21.12■□□□□ 0.97
CDHR3-207ENST00000470188 ARHGAP1Q07960 439 aa21.12■□□□□ 0.97
CDHR3-207ENST00000470188 OASLQ15646 514 aaKnown RBP21.12■□□□□ 0.97
CDHR3-207ENST00000470188 EP400NLQ6ZTU2 488 aa21.12■□□□□ 0.97
CDHR3-207ENST00000470188 ASRGL1Q7L266 308 aa21.12■□□□□ 0.97
CDHR3-207ENST00000470188 ARMCX2Q7L311 632 aa21.12■□□□□ 0.97
CDHR3-207ENST00000470188 SPATA21Q7Z572 469 aa21.12■□□□□ 0.97
CDHR3-207ENST00000470188 KIRREL3Q8IZU9 778 aa21.12■□□□□ 0.97
CDHR3-207ENST00000470188 TMEM130Q8N3G9 435 aa21.12■□□□□ 0.97
CDHR3-207ENST00000470188 JOSD2Q8TAC2 188 aa21.12■□□□□ 0.97
CDHR3-207ENST00000470188 ZNF570Q96NI8 536 aa21.12■□□□□ 0.97
CDHR3-207ENST00000470188 PPP1R16BQ96T49 567 aa21.12■□□□□ 0.97
CDHR3-207ENST00000470188 SYNCQ9H7C4 482 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms