RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 MYRFLQ96LU7 910 aa17.48■□□□□ 0.39
COL9A3-208ENST00000469802 SLC39A2Q9NP94 309 aa17.48■□□□□ 0.39
COL9A3-208ENST00000469802 PCDHGA2Q9Y5H1 932 aa17.48■□□□□ 0.39
COL9A3-208ENST00000469802 DCHS1Q96JQ0 3298 aa17.47■□□□□ 0.39
COL9A3-208ENST00000469802 MYBPHLA2RUH7 354 aa17.47■□□□□ 0.39
COL9A3-208ENST00000469802 SLC38A8A6NNN8 435 aa17.47■□□□□ 0.39
COL9A3-208ENST00000469802 DPYSL4O14531 572 aa17.47■□□□□ 0.39
COL9A3-208ENST00000469802 CLIC2O15247 247 aa17.47■□□□□ 0.39
COL9A3-208ENST00000469802 WARSP23381 471 aaKnown RBP17.47■□□□□ 0.39
COL9A3-208ENST00000469802 CCNE1P24864 410 aa17.47■□□□□ 0.39
COL9A3-208ENST00000469802 CTHP32929 405 aa17.47■□□□□ 0.39
COL9A3-208ENST00000469802 MAGEA11P43364 429 aa17.47■□□□□ 0.39
COL9A3-208ENST00000469802 SOX9P48436 509 aa17.47■□□□□ 0.39
COL9A3-208ENST00000469802 CYP2J2P51589 502 aa17.47■□□□□ 0.39
COL9A3-208ENST00000469802 RPL10AP62906 217 aaKnown RBP17.47■□□□□ 0.39
COL9A3-208ENST00000469802 PLCB2Q00722 1185 aa17.47■□□□□ 0.39
COL9A3-208ENST00000469802 DDR2Q16832 855 aa17.47■□□□□ 0.39
COL9A3-208ENST00000469802 WDR44Q5JSH3 913 aa17.47■□□□□ 0.39
COL9A3-208ENST00000469802 SDHAF4Q5VUM1 108 aa17.47■□□□□ 0.39
COL9A3-208ENST00000469802 CELF5Q8N6W0 485 aaKnown RBP17.47■□□□□ 0.39
COL9A3-208ENST00000469802 SUMF1Q8NBK3 374 aa17.47■□□□□ 0.39
COL9A3-208ENST00000469802 SPRYD3Q8NCJ5 442 aa17.47■□□□□ 0.39
COL9A3-208ENST00000469802 ZFYVE19Q96K21 471 aa17.47■□□□□ 0.39
COL9A3-208ENST00000469802 SYT15Q9BQS2 421 aa17.47■□□□□ 0.39
COL9A3-208ENST00000469802 SMG9Q9H0W8 520 aaKnown RBP17.47■□□□□ 0.39
COL9A3-208ENST00000469802 C8orf33Q9H7E9 229 aaPredicted RBP17.47■□□□□ 0.39
COL9A3-208ENST00000469802 CRTAC1Q9NQ79 661 aa17.47■□□□□ 0.39
COL9A3-208ENST00000469802 SERTAD1Q9UHV2 236 aa17.47■□□□□ 0.39
COL9A3-208ENST00000469802 ZDHHC9Q9Y397 364 aa17.47■□□□□ 0.39
COL9A3-208ENST00000469802 DMXL1Q9Y485 3027 aa17.47■□□□□ 0.39
COL9A3-208ENST00000469802 GPR179Q6PRD1 2367 aa17.46■□□□□ 0.39
COL9A3-208ENST00000469802 SPECC1L-ADORA2AF8WAN1 911 aa17.46■□□□□ 0.39
COL9A3-208ENST00000469802 LILRB5O75023 590 aa17.46■□□□□ 0.39
COL9A3-208ENST00000469802 ATP2C2O75185 946 aa17.46■□□□□ 0.39
COL9A3-208ENST00000469802 DLATP10515 647 aaKnown RBP17.46■□□□□ 0.39
COL9A3-208ENST00000469802 CSTF1Q05048 431 aaKnown RBP17.46■□□□□ 0.39
COL9A3-208ENST00000469802 KNOP1Q1ED39 458 aaKnown RBP17.46■□□□□ 0.39
COL9A3-208ENST00000469802 TXNDC11Q6PKC3 985 aa17.46■□□□□ 0.39
COL9A3-208ENST00000469802 RALGPS2Q86X27 583 aaPredicted RBP17.46■□□□□ 0.39
COL9A3-208ENST00000469802 CEP57L1Q8IYX8 460 aa17.46■□□□□ 0.39
COL9A3-208ENST00000469802 RDH13Q8NBN7 331 aa17.46■□□□□ 0.39
COL9A3-208ENST00000469802 KIAA0895Q8NCT3 520 aa17.46■□□□□ 0.39
COL9A3-208ENST00000469802 TMEM174Q8WUU8 243 aa17.46■□□□□ 0.39
COL9A3-208ENST00000469802 USP13Q92995 863 aaPredicted RBP17.46■□□□□ 0.39
COL9A3-208ENST00000469802 ZSCAN32Q9NX65 697 aa17.46■□□□□ 0.39
COL9A3-208ENST00000469802 GTSE1Q9NYZ3 720 aa17.46■□□□□ 0.39
COL9A3-208ENST00000469802 UXTQ9UBK9 157 aaPredicted RBP17.46■□□□□ 0.39
COL9A3-208ENST00000469802 CDH9Q9ULB4 789 aa17.46■□□□□ 0.39
COL9A3-208ENST00000469802 HPSEQ9Y251 543 aa17.46■□□□□ 0.39
COL9A3-208ENST00000469802 CCL26Q9Y258 94 aa17.46■□□□□ 0.39
COL9A3-208ENST00000469802 NME7Q9Y5B8 376 aa17.46■□□□□ 0.39
COL9A3-208ENST00000469802 KINO60870 393 aaKnown RBP17.45■□□□□ 0.38
COL9A3-208ENST00000469802 TACC1O75410 805 aa17.45■□□□□ 0.38
COL9A3-208ENST00000469802 STAU1O95793 577 aaKnown RBP17.45■□□□□ 0.38
COL9A3-208ENST00000469802 CST3P01034 146 aaPredicted RBP17.45■□□□□ 0.38
COL9A3-208ENST00000469802 PFKFB1P16118 471 aa17.45■□□□□ 0.38
COL9A3-208ENST00000469802 TNNI1P19237 187 aa17.45■□□□□ 0.38
COL9A3-208ENST00000469802 LMO2P25791 158 aa17.45■□□□□ 0.38
COL9A3-208ENST00000469802 PSMC1P62191 440 aaKnown RBP17.45■□□□□ 0.38
COL9A3-208ENST00000469802 TNK2Q07912 1038 aa17.45■□□□□ 0.38
COL9A3-208ENST00000469802 GAS6Q14393 721 aa17.45■□□□□ 0.38
COL9A3-208ENST00000469802 ZNF268Q14587 947 aaPredicted RBP17.45■□□□□ 0.38
COL9A3-208ENST00000469802 TXNDC8Q6A555 127 aa17.45■□□□□ 0.38
COL9A3-208ENST00000469802 C4orf50Q6ZRC1 276 aa17.45■□□□□ 0.38
COL9A3-208ENST00000469802 MON1AQ86VX9 555 aa17.45■□□□□ 0.38
COL9A3-208ENST00000469802 SPATA2LQ8IUW3 424 aaPredicted RBP17.45■□□□□ 0.38
COL9A3-208ENST00000469802 MAB21L3Q8N8X9 362 aa17.45■□□□□ 0.38
COL9A3-208ENST00000469802 RIN3Q8TB24 985 aa17.45■□□□□ 0.38
COL9A3-208ENST00000469802 PLEKHO2Q8TD55 490 aa17.45■□□□□ 0.38
COL9A3-208ENST00000469802 ZNF516Q92618 1163 aa17.45■□□□□ 0.38
COL9A3-208ENST00000469802 MYLPFQ96A32 169 aa17.45■□□□□ 0.38
COL9A3-208ENST00000469802 CCDC127Q96BQ5 260 aa17.45■□□□□ 0.38
COL9A3-208ENST00000469802 PAGE5Q96GU1 130 aa17.45■□□□□ 0.38
COL9A3-208ENST00000469802 FNBP1Q96RU3 617 aa17.45■□□□□ 0.38
COL9A3-208ENST00000469802 FAM83CQ9BQN1 747 aa17.45■□□□□ 0.38
COL9A3-208ENST00000469802 FAM126AQ9BYI3 521 aaPredicted RBP17.45■□□□□ 0.38
COL9A3-208ENST00000469802 XYLT2Q9H1B5 865 aa17.45■□□□□ 0.38
COL9A3-208ENST00000469802 KIF9Q9HAQ2 790 aa17.45■□□□□ 0.38
COL9A3-208ENST00000469802 LMAN1LQ9HAT1 526 aa17.45■□□□□ 0.38
COL9A3-208ENST00000469802 MAGED2Q9UNF1 606 aaPredicted RBP17.45■□□□□ 0.38
COL9A3-208ENST00000469802 R3HCC1Q9Y3T6 440 aaKnown RBP17.45■□□□□ 0.38
COL9A3-208ENST00000469802 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.44■□□□□ 0.38
COL9A3-208ENST00000469802 FAM237AA0A1B0GTK4 181 aa17.44■□□□□ 0.38
COL9A3-208ENST00000469802 CMA1P23946 247 aa17.44■□□□□ 0.38
COL9A3-208ENST00000469802 AVPR1AP37288 418 aa17.44■□□□□ 0.38
COL9A3-208ENST00000469802 KPNA1P52294 538 aaPredicted RBP17.44■□□□□ 0.38
COL9A3-208ENST00000469802 STK4Q13043 487 aa17.44■□□□□ 0.38
COL9A3-208ENST00000469802 TSSK4Q6SA08 328 aa17.44■□□□□ 0.38
COL9A3-208ENST00000469802 GOLGA5Q8TBA6 731 aa17.44■□□□□ 0.38
COL9A3-208ENST00000469802 MRPS31Q92665 395 aaKnown RBP17.44■□□□□ 0.38
COL9A3-208ENST00000469802 CHAMP1Q96JM3 812 aa17.44■□□□□ 0.38
COL9A3-208ENST00000469802 CEP295NLQ96MC4 621 aa17.44■□□□□ 0.38
COL9A3-208ENST00000469802 MRPL45Q9BRJ2 306 aaKnown RBP17.44■□□□□ 0.38
COL9A3-208ENST00000469802 USP25Q9UHP3 1055 aa17.44■□□□□ 0.38
COL9A3-208ENST00000469802 EML5Q05BV3 1969 aa17.43■□□□□ 0.38
COL9A3-208ENST00000469802 A0A1B0GVL5 298 aa17.43■□□□□ 0.38
COL9A3-208ENST00000469802 MYL1P05976 194 aa17.43■□□□□ 0.38
COL9A3-208ENST00000469802 FAM163BP0C2L3 166 aa17.43■□□□□ 0.38
COL9A3-208ENST00000469802 CCR3P51677 355 aa17.43■□□□□ 0.38
COL9A3-208ENST00000469802 CLDN10P78369 228 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms