RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 VRTNQ9H8Y1 702 aa19.55■□□□□ 0.72
PHGDH-204ENST00000469443 HELZP42694 1942 aaKnown RBP19.55■□□□□ 0.72
PHGDH-204ENST00000469443 WEE1P30291 646 aa19.54■□□□□ 0.72
PHGDH-204ENST00000469443 GNL1P36915 607 aaPredicted RBP19.54■□□□□ 0.72
PHGDH-204ENST00000469443 MAGEA11P43364 429 aa19.54■□□□□ 0.72
PHGDH-204ENST00000469443 PSMC1P62191 440 aaKnown RBP19.54■□□□□ 0.72
PHGDH-204ENST00000469443 PNOCQ13519 176 aa19.54■□□□□ 0.72
PHGDH-204ENST00000469443 SDHAF4Q5VUM1 108 aa19.54■□□□□ 0.72
PHGDH-204ENST00000469443 ENGASEQ8NFI3 743 aa19.54■□□□□ 0.72
PHGDH-204ENST00000469443 OR6B3Q8NGW1 331 aa19.54■□□□□ 0.72
PHGDH-204ENST00000469443 ATOH1Q92858 354 aaPredicted RBP19.54■□□□□ 0.72
PHGDH-204ENST00000469443 CRTAC1Q9NQ79 661 aa19.54■□□□□ 0.72
PHGDH-204ENST00000469443 TRPV5Q9NQA5 729 aa19.54■□□□□ 0.72
PHGDH-204ENST00000469443 HEBP1Q9NRV9 189 aa19.54■□□□□ 0.72
PHGDH-204ENST00000469443 MAGEC2Q9UBF1 373 aaPredicted RBP19.54■□□□□ 0.72
PHGDH-204ENST00000469443 ZMYM5Q9UJ78 669 aa19.54■□□□□ 0.72
PHGDH-204ENST00000469443 MAPK13O15264 365 aa19.53■□□□□ 0.72
PHGDH-204ENST00000469443 F11P03951 625 aa19.53■□□□□ 0.72
PHGDH-204ENST00000469443 DCNP07585 359 aaKnown RBP19.53■□□□□ 0.72
PHGDH-204ENST00000469443 NR2F2P24468 414 aa19.53■□□□□ 0.72
PHGDH-204ENST00000469443 NLRP12P59046 1061 aa19.53■□□□□ 0.72
PHGDH-204ENST00000469443 DLG4P78352 724 aa19.53■□□□□ 0.72
PHGDH-204ENST00000469443 FAM160A1Q05DH4 1040 aa19.53■□□□□ 0.72
PHGDH-204ENST00000469443 NCOA4Q13772 614 aa19.53■□□□□ 0.72
PHGDH-204ENST00000469443 ZNF699Q32M78 642 aa19.53■□□□□ 0.72
PHGDH-204ENST00000469443 ZACNQ401N2 412 aa19.53■□□□□ 0.72
PHGDH-204ENST00000469443 TPRG1Q6ZUI0 275 aa19.53■□□□□ 0.72
PHGDH-204ENST00000469443 TMEM150AQ86TG1 271 aa19.53■□□□□ 0.72
PHGDH-204ENST00000469443 STKLD1Q8NE28 680 aa19.53■□□□□ 0.72
PHGDH-204ENST00000469443 MYLPFQ96A32 169 aa19.53■□□□□ 0.72
PHGDH-204ENST00000469443 RSPRY1Q96DX4 576 aa19.53■□□□□ 0.72
PHGDH-204ENST00000469443 PHOX2BQ99453 314 aa19.53■□□□□ 0.72
PHGDH-204ENST00000469443 OSBPL6Q9BZF3 934 aa19.53■□□□□ 0.72
PHGDH-204ENST00000469443 FAM86C1Q9NVL1 165 aa19.53■□□□□ 0.72
PHGDH-204ENST00000469443 OBP2AQ9NY56 170 aa19.53■□□□□ 0.72
PHGDH-204ENST00000469443 DLGAP2Q9P1A6 1054 aa19.53■□□□□ 0.72
PHGDH-204ENST00000469443 NXF1Q9UBU9 619 aaKnown RBP19.53■□□□□ 0.72
PHGDH-204ENST00000469443 MAGED2Q9UNF1 606 aaPredicted RBP19.53■□□□□ 0.72
PHGDH-204ENST00000469443 NME7Q9Y5B8 376 aa19.53■□□□□ 0.72
PHGDH-204ENST00000469443 FANCMQ8IYD8 2048 aa19.52■□□□□ 0.72
PHGDH-204ENST00000469443 SLC38A8A6NNN8 435 aa19.52■□□□□ 0.72
PHGDH-204ENST00000469443 DPYSL4O14531 572 aa19.52■□□□□ 0.72
PHGDH-204ENST00000469443 IKBKBO14920 756 aa19.52■□□□□ 0.72
PHGDH-204ENST00000469443 ZNF263O14978 683 aa19.52■□□□□ 0.72
PHGDH-204ENST00000469443 NOL4O94818 638 aa19.52■□□□□ 0.72
PHGDH-204ENST00000469443 VNN1O95497 513 aa19.52■□□□□ 0.72
PHGDH-204ENST00000469443 RPL13P26373 211 aaKnown RBP19.52■□□□□ 0.72
PHGDH-204ENST00000469443 UBXN2BQ14CS0 331 aa19.52■□□□□ 0.72
PHGDH-204ENST00000469443 ZNF667Q5HYK9 610 aa19.52■□□□□ 0.72
PHGDH-204ENST00000469443 VSTM1Q6UX27 236 aa19.52■□□□□ 0.72
PHGDH-204ENST00000469443 ALYREFQ86V81 257 aaKnown RBP19.52■□□□□ 0.72
PHGDH-204ENST00000469443 GPIHBP1Q8IV16 184 aa19.52■□□□□ 0.72
PHGDH-204ENST00000469443 SCN4BQ8IWT1 228 aa19.52■□□□□ 0.72
PHGDH-204ENST00000469443 YAF2Q8IY57 180 aa19.52■□□□□ 0.72
PHGDH-204ENST00000469443 MYCBPAPQ8TBZ2 947 aa19.52■□□□□ 0.72
PHGDH-204ENST00000469443 TRMT2BQ96GJ1 504 aaKnown RBP19.52■□□□□ 0.72
PHGDH-204ENST00000469443 LTB4R2Q9NPC1 389 aa19.52■□□□□ 0.72
PHGDH-204ENST00000469443 RMND1Q9NWS8 449 aa19.52■□□□□ 0.72
PHGDH-204ENST00000469443 UXTQ9UBK9 157 aaPredicted RBP19.52■□□□□ 0.72
PHGDH-204ENST00000469443 CHADO15335 359 aa19.51■□□□□ 0.71
PHGDH-204ENST00000469443 CD72P21854 359 aa19.51■□□□□ 0.71
PHGDH-204ENST00000469443 BDNFP23560 247 aa19.51■□□□□ 0.71
PHGDH-204ENST00000469443 DDX6P26196 483 aaKnown RBP eCLIP19.51■□□□□ 0.71
PHGDH-204ENST00000469443 MRE11P49959 708 aa19.51■□□□□ 0.71
PHGDH-204ENST00000469443 VAMP7P51809 220 aa19.51■□□□□ 0.71
PHGDH-204ENST00000469443 CYP27A1Q02318 531 aa19.51■□□□□ 0.71
PHGDH-204ENST00000469443 FCHO2Q0JRZ9 810 aa19.51■□□□□ 0.71
PHGDH-204ENST00000469443 ANGPT1Q15389 498 aa19.51■□□□□ 0.71
PHGDH-204ENST00000469443 ZCWPW2Q504Y3 356 aa19.51■□□□□ 0.71
PHGDH-204ENST00000469443 MDH1BQ5I0G3 518 aa19.51■□□□□ 0.71
PHGDH-204ENST00000469443 C1orf220Q5T0J3 134 aa19.51■□□□□ 0.71
PHGDH-204ENST00000469443 MRPS31Q92665 395 aaKnown RBP19.51■□□□□ 0.71
PHGDH-204ENST00000469443 PCED1BQ96HM7 432 aa19.51■□□□□ 0.71
PHGDH-204ENST00000469443 MYRFLQ96LU7 910 aa19.51■□□□□ 0.71
PHGDH-204ENST00000469443 TIGD1Q96MW7 591 aa19.51■□□□□ 0.71
PHGDH-204ENST00000469443 SLC46A2Q9BY10 475 aa19.51■□□□□ 0.71
PHGDH-204ENST00000469443 SMYD3Q9H7B4 428 aa19.51■□□□□ 0.71
PHGDH-204ENST00000469443 FAM170BA6NMN3 283 aa19.5■□□□□ 0.71
PHGDH-204ENST00000469443 SOBPA7XYQ1 873 aa19.5■□□□□ 0.71
PHGDH-204ENST00000469443 A8MXQ7 604 aa19.5■□□□□ 0.71
PHGDH-204ENST00000469443 ARNTLO00327 626 aa19.5■□□□□ 0.71
PHGDH-204ENST00000469443 LRRN2O75325 713 aa19.5■□□□□ 0.71
PHGDH-204ENST00000469443 AKAP3O75969 853 aa19.5■□□□□ 0.71
PHGDH-204ENST00000469443 CLSTN1O94985 981 aa19.5■□□□□ 0.71
PHGDH-204ENST00000469443 PRAMEF12O95522 483 aa19.5■□□□□ 0.71
PHGDH-204ENST00000469443 GLULP15104 373 aa19.5■□□□□ 0.71
PHGDH-204ENST00000469443 PTPN1P18031 435 aaKnown RBP19.5■□□□□ 0.71
PHGDH-204ENST00000469443 ADAM9Q13443 819 aa19.5■□□□□ 0.71
PHGDH-204ENST00000469443 ZNF852Q6ZMS4 543 aa19.5■□□□□ 0.71
PHGDH-204ENST00000469443 INTS8Q75QN2 995 aaKnown RBP19.5■□□□□ 0.71
PHGDH-204ENST00000469443 SV2AQ7L0J3 742 aa19.5■□□□□ 0.71
PHGDH-204ENST00000469443 FAM186BQ8IYM0 893 aa19.5■□□□□ 0.71
PHGDH-204ENST00000469443 SMYD4Q8IYR2 804 aaPredicted RBP19.5■□□□□ 0.71
PHGDH-204ENST00000469443 CMTM8Q8IZV2 173 aa19.5■□□□□ 0.71
PHGDH-204ENST00000469443 SPATA17Q96L03 361 aa19.5■□□□□ 0.71
PHGDH-204ENST00000469443 CEP295NLQ96MC4 621 aa19.5■□□□□ 0.71
PHGDH-204ENST00000469443 GSDMAQ96QA5 445 aa19.5■□□□□ 0.71
PHGDH-204ENST00000469443 NELL2Q99435 816 aa19.5■□□□□ 0.71
PHGDH-204ENST00000469443 MRPS17Q9Y2R5 130 aaKnown RBP19.5■□□□□ 0.71
PHGDH-204ENST00000469443 MTF2Q9Y483 593 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms