RNA–Protein interactions for RNA: ENST00000469278.5

SOX2-OT-204, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-204ENST00000469278 CCDC146Q8IYE0 955 aa4.16□□□□□ -1.74
SOX2-OT-204ENST00000469278 MAGEB6Q8N7X4 407 aa4.16□□□□□ -1.74
SOX2-OT-204ENST00000469278 PNLDC1Q8NA58 520 aaKnown RBP4.16□□□□□ -1.74
SOX2-OT-204ENST00000469278 PIGOQ8TEQ8 1089 aa4.16□□□□□ -1.74
SOX2-OT-204ENST00000469278 LYZL4Q96KX0 146 aa4.16□□□□□ -1.74
SOX2-OT-204ENST00000469278 MANSC1Q9H8J5 431 aa4.16□□□□□ -1.74
SOX2-OT-204ENST00000469278 GABBR1Q9UBS5 961 aa4.16□□□□□ -1.74
SOX2-OT-204ENST00000469278 FAM171A2A8MVW0 826 aa4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 E7ENX8 843 aa4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 F5H697 171 aa4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 PLIN1O60240 522 aa4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 CAND2O75155 1236 aa4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 OFD1O75665 1012 aa4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 AMY1AP04745 511 aa4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 ALPLP05186 524 aa4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 KRT18P05783 430 aaKnown RBP4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 KRTAP5-9P26371 169 aa4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 FXR1P51114 621 aaKnown RBP eCLIP4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 TBX4P57082 545 aa4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 TAP2Q03519 686 aa4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 SEPT2Q15019 361 aa4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 ARHGAP29Q52LW3 1261 aa4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 SHC4Q6S5L8 630 aa4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 EPM2AIP1Q7L775 607 aaPredicted RBP4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 FAM9AQ8IZU1 332 aaPredicted RBP4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 CFAP52Q8N1V2 620 aa4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 ZGPATQ8N5A5 531 aaKnown RBP4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 OR2I1PQ8NGU4 316 aa4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 FBXO41Q8TF61 875 aa4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 NRG4Q8WWG1 115 aa4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 COA7Q96BR5 231 aa4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 NMRK2Q9NPI5 230 aa4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 MDFICQ9P1T7 246 aa4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 DKK3Q9UBP4 350 aa4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 DNM3Q9UQ16 869 aa4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 MYBBP1AQ9BQG0 1328 aaKnown RBP4.15□□□□□ -1.75
SOX2-OT-204ENST00000469278 VSTM5A8MXK1 200 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 E5RJQ4 531 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 PRSS44E7EML9 344 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 QSOX1O00391 747 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 ZNF213O14771 459 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 ADAMTS3O15072 1205 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 TRIAP1O43715 76 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 TMEM191BP0C7N4 346 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 LPOP22079 712 aaPredicted RBP4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 EDNRBP24530 442 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 SLC6A4P31645 630 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 WASP42768 502 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 MGAT2Q10469 447 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 GTF2H3Q13889 308 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 ERV3-1Q14264 604 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 TBCCQ15814 346 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 ZNF628Q5EBL2 1059 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 AARS2Q5JTZ9 985 aaKnown RBP4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 TAPT1Q6NXT6 567 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 CATIPQ7Z7H3 387 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 RBMXL3Q8N7X1 1067 aaKnown RBP4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 TTC8Q8TAM2 541 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 KLHL32Q96NJ5 620 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 AIFM3Q96NN9 605 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 ASB2Q96Q27 587 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 ACTRT3Q9BYD9 372 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 KRTAP4-4Q9BYR3 166 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 GTPBP4Q9BZE4 634 aaKnown RBP4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 SLC12A5Q9H2X9 1139 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 PRDM11Q9NQV5 511 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 TXLNGQ9NUQ3 528 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 IPPQ9Y573 584 aa4.14□□□□□ -1.75
SOX2-OT-204ENST00000469278 FAM90A8PA6NJQ4 464 aa4.13□□□□□ -1.75
SOX2-OT-204ENST00000469278 HTRA2O43464 458 aaPredicted RBP4.13□□□□□ -1.75
SOX2-OT-204ENST00000469278 AP1G1O43747 822 aa4.13□□□□□ -1.75
SOX2-OT-204ENST00000469278 BCAR3O75815 825 aa4.13□□□□□ -1.75
SOX2-OT-204ENST00000469278 FAM90A13PP0C7W8 464 aa4.13□□□□□ -1.75
SOX2-OT-204ENST00000469278 FAM90A24PP0C7X0 464 aa4.13□□□□□ -1.75
SOX2-OT-204ENST00000469278 MTHFD1P11586 935 aaKnown RBP4.13□□□□□ -1.75
SOX2-OT-204ENST00000469278 AKAP5P24588 427 aa4.13□□□□□ -1.75
SOX2-OT-204ENST00000469278 PCSK6P29122 969 aa4.13□□□□□ -1.75
SOX2-OT-204ENST00000469278 HTR6P50406 440 aa4.13□□□□□ -1.75
SOX2-OT-204ENST00000469278 NANOS2P60321 138 aaKnown RBP4.13□□□□□ -1.75
SOX2-OT-204ENST00000469278 C3orf36Q3SXR2 165 aa4.13□□□□□ -1.75
SOX2-OT-204ENST00000469278 ANKRD16Q6P6B7 361 aa4.13□□□□□ -1.75
SOX2-OT-204ENST00000469278 B3GNT9Q6UX72 402 aa4.13□□□□□ -1.75
SOX2-OT-204ENST00000469278 MIGA2Q7L4E1 593 aa4.13□□□□□ -1.75
SOX2-OT-204ENST00000469278 TMPRSS9Q7Z410 1059 aa4.13□□□□□ -1.75
SOX2-OT-204ENST00000469278 C8orf58Q8NAV2 365 aa4.13□□□□□ -1.75
SOX2-OT-204ENST00000469278 ATRIPQ8WXE1 791 aa4.13□□□□□ -1.75
SOX2-OT-204ENST00000469278 VCPIP1Q96JH7 1222 aa4.13□□□□□ -1.75
SOX2-OT-204ENST00000469278 IMPG2Q9BZV3 1241 aa4.13□□□□□ -1.75
SOX2-OT-204ENST00000469278 HIPK2Q9H2X6 1198 aa4.13□□□□□ -1.75
SOX2-OT-204ENST00000469278 LIMCH1Q9UPQ0 1083 aa4.13□□□□□ -1.75
SOX2-OT-204ENST00000469278 WDR17Q8IZU2 1322 aa4.13□□□□□ -1.75
SOX2-OT-204ENST00000469278 CCDC194A0A1B0GVG4 234 aa4.12□□□□□ -1.75
SOX2-OT-204ENST00000469278 CCDC154A6NI56 674 aa4.12□□□□□ -1.75
SOX2-OT-204ENST00000469278 ERC2O15083 957 aa4.12□□□□□ -1.75
SOX2-OT-204ENST00000469278 GRM6O15303 877 aa4.12□□□□□ -1.75
SOX2-OT-204ENST00000469278 RPLP2P05387 115 aaKnown RBP4.12□□□□□ -1.75
SOX2-OT-204ENST00000469278 MYL1P05976 194 aa4.12□□□□□ -1.75
SOX2-OT-204ENST00000469278 POU2F2P09086 479 aa4.12□□□□□ -1.75
SOX2-OT-204ENST00000469278 JUPP14923 745 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms