RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 GCSHP23434 173 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 PPM1AP35813 382 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 UCP3P55916 312 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 BLOC1S1P78537 153 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 TCF15Q12870 199 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 RAB32Q13637 225 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 DHX8Q14562 1220 aaKnown RBP6.17□□□□□ -1.42
LSM5-209ENST00000468872 KRT72Q14CN4 511 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 PPP1R32Q7Z5V6 425 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 PRIMA1Q86XR5 153 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 ATP11CQ8NB49 1132 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 OR56A3Q8NH54 315 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 BRI3BPQ8WY22 251 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 DDX17Q92841 729 aaKnown RBP6.17□□□□□ -1.42
LSM5-209ENST00000468872 CRB3Q9BUF7 120 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 CDC23Q9UJX2 597 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 PCDHGB2Q9Y5G2 931 aa6.17□□□□□ -1.42
LSM5-209ENST00000468872 A0A1B0GTW7 788 aa6.16□□□□□ -1.42
LSM5-209ENST00000468872 FOSP01100 380 aaPredicted RBP6.16□□□□□ -1.42
LSM5-209ENST00000468872 ITGAMP11215 1152 aa6.16□□□□□ -1.42
LSM5-209ENST00000468872 CKBP12277 381 aa6.16□□□□□ -1.42
LSM5-209ENST00000468872 IL1R1P14778 569 aa6.16□□□□□ -1.42
LSM5-209ENST00000468872 FDXRP22570 491 aa6.16□□□□□ -1.42
LSM5-209ENST00000468872 POU6F2P78424 691 aaPredicted RBP6.16□□□□□ -1.42
LSM5-209ENST00000468872 OCA2Q04671 838 aa6.16□□□□□ -1.42
LSM5-209ENST00000468872 FOXI1Q12951 378 aa6.16□□□□□ -1.42
LSM5-209ENST00000468872 B3GNTL1Q67FW5 361 aaPredicted RBP6.16□□□□□ -1.42
LSM5-209ENST00000468872 TMEM132CQ8N3T6 1108 aa6.16□□□□□ -1.42
LSM5-209ENST00000468872 SLC15A4Q8N697 577 aa6.16□□□□□ -1.42
LSM5-209ENST00000468872 NUP133Q8WUM0 1156 aa6.16□□□□□ -1.42
LSM5-209ENST00000468872 SNX22Q96L94 193 aa6.16□□□□□ -1.42
LSM5-209ENST00000468872 ZSWIM1Q9BR11 485 aa6.16□□□□□ -1.42
LSM5-209ENST00000468872 SELENOOQ9BVL4 669 aa6.16□□□□□ -1.42
LSM5-209ENST00000468872 REXO4Q9GZR2 422 aaKnown RBP6.16□□□□□ -1.42
LSM5-209ENST00000468872 ARFGAP3Q9NP61 516 aa6.16□□□□□ -1.42
LSM5-209ENST00000468872 GJB4Q9NTQ9 266 aa6.16□□□□□ -1.42
LSM5-209ENST00000468872 VSX1Q9NZR4 365 aaPredicted RBP6.16□□□□□ -1.42
LSM5-209ENST00000468872 CCDC78A2IDD5 438 aa6.15□□□□□ -1.42
LSM5-209ENST00000468872 MBD3L4A6NDZ8 208 aaPredicted RBP6.15□□□□□ -1.42
LSM5-209ENST00000468872 MBD3L3A6NE82 208 aaPredicted RBP6.15□□□□□ -1.42
LSM5-209ENST00000468872 PYCARD-AS1I3L0S3 204 aa6.15□□□□□ -1.42
LSM5-209ENST00000468872 MT-ND5P03915 603 aa6.15□□□□□ -1.42
LSM5-209ENST00000468872 FGFR2P21802 821 aa6.15□□□□□ -1.42
LSM5-209ENST00000468872 CLK3P49761 638 aaKnown RBP6.15□□□□□ -1.42
LSM5-209ENST00000468872 SCAPQ12770 1279 aa6.15□□□□□ -1.42
LSM5-209ENST00000468872 SLC35G1Q2M3R5 365 aa6.15□□□□□ -1.42
LSM5-209ENST00000468872 SPDYE7PQ495Y7 208 aa6.15□□□□□ -1.42
LSM5-209ENST00000468872 SLC44A4Q53GD3 710 aa6.15□□□□□ -1.42
LSM5-209ENST00000468872 STRIP1Q5VSL9 837 aa6.15□□□□□ -1.42
LSM5-209ENST00000468872 DCAF12L1Q5VU92 463 aa6.15□□□□□ -1.42
LSM5-209ENST00000468872 UNC13DQ70J99 1090 aa6.15□□□□□ -1.42
LSM5-209ENST00000468872 MPP5Q8N3R9 675 aa6.15□□□□□ -1.42
LSM5-209ENST00000468872 FAM46DQ8NEK8 389 aa6.15□□□□□ -1.42
LSM5-209ENST00000468872 MARS2Q96GW9 593 aaKnown RBP6.15□□□□□ -1.42
LSM5-209ENST00000468872 SPATA5L1Q9BVQ7 753 aa6.15□□□□□ -1.42
LSM5-209ENST00000468872 ALOXE3Q9BYJ1 711 aa6.15□□□□□ -1.42
LSM5-209ENST00000468872 RNPEPQ9H4A4 650 aa6.15□□□□□ -1.42
LSM5-209ENST00000468872 PPCSQ9HAB8 311 aa6.15□□□□□ -1.42
LSM5-209ENST00000468872 A1CFQ9NQ94 594 aaKnown RBP6.15□□□□□ -1.42
LSM5-209ENST00000468872 ETAA1Q9NY74 926 aa6.15□□□□□ -1.42
LSM5-209ENST00000468872 MYO1AQ9UBC5 1043 aa6.15□□□□□ -1.42
LSM5-209ENST00000468872 XPR1Q9UBH6 696 aa6.15□□□□□ -1.42
LSM5-209ENST00000468872 CDYLQ9Y232 598 aa6.15□□□□□ -1.42
LSM5-209ENST00000468872 TMX2Q9Y320 296 aa6.15□□□□□ -1.42
LSM5-209ENST00000468872 PAXBP1Q9Y5B6 917 aa6.15□□□□□ -1.42
LSM5-209ENST00000468872 ESRRBO95718 433 aa6.14□□□□□ -1.43
LSM5-209ENST00000468872 ANXA2P07355 339 aaKnown RBP6.14□□□□□ -1.43
LSM5-209ENST00000468872 FBLP22087 321 aaKnown RBP6.14□□□□□ -1.43
LSM5-209ENST00000468872 KLRC1P26715 233 aa6.14□□□□□ -1.43
LSM5-209ENST00000468872 HSPA7P48741 367 aa6.14□□□□□ -1.43
LSM5-209ENST00000468872 MAPK10P53779 464 aa6.14□□□□□ -1.43
LSM5-209ENST00000468872 TNFAIP2Q03169 654 aa6.14□□□□□ -1.43
LSM5-209ENST00000468872 BOP1Q14137 746 aaKnown RBP6.14□□□□□ -1.43
LSM5-209ENST00000468872 ARL13BQ3SXY8 428 aa6.14□□□□□ -1.43
LSM5-209ENST00000468872 TUBB8Q3ZCM7 444 aa6.14□□□□□ -1.43
LSM5-209ENST00000468872 FAM160B1Q5W0V3 765 aa6.14□□□□□ -1.43
LSM5-209ENST00000468872 GPR149Q86SP6 731 aa6.14□□□□□ -1.43
LSM5-209ENST00000468872 ADGRG3Q86Y34 549 aa6.14□□□□□ -1.43
LSM5-209ENST00000468872 MYLK4Q86YV6 388 aaPredicted RBP6.14□□□□□ -1.43
LSM5-209ENST00000468872 CFAP52Q8N1V2 620 aa6.14□□□□□ -1.43
LSM5-209ENST00000468872 IQCDQ96DY2 449 aa6.14□□□□□ -1.43
LSM5-209ENST00000468872 CNPPD1Q9BV87 410 aa6.14□□□□□ -1.43
LSM5-209ENST00000468872 SIK2Q9H0K1 926 aa6.14□□□□□ -1.43
LSM5-209ENST00000468872 CHST8Q9H2A9 424 aa6.14□□□□□ -1.43
LSM5-209ENST00000468872 SERHLQ9NQF3 203 aa6.14□□□□□ -1.43
LSM5-209ENST00000468872 HESX1Q9UBX0 185 aa6.14□□□□□ -1.43
LSM5-209ENST00000468872 LRCH1Q9Y2L9 728 aa6.14□□□□□ -1.43
LSM5-209ENST00000468872 NOX1Q9Y5S8 564 aa6.14□□□□□ -1.43
LSM5-209ENST00000468872 VPS4BO75351 444 aa6.13□□□□□ -1.43
LSM5-209ENST00000468872 FGFR4P22455 802 aa6.13□□□□□ -1.43
LSM5-209ENST00000468872 CARSP49589 748 aaKnown RBP6.13□□□□□ -1.43
LSM5-209ENST00000468872 TOB1P50616 345 aaPredicted RBP6.13□□□□□ -1.43
LSM5-209ENST00000468872 CXADRP78310 365 aa6.13□□□□□ -1.43
LSM5-209ENST00000468872 MPEG1Q2M385 716 aa6.13□□□□□ -1.43
LSM5-209ENST00000468872 ZDHHC24Q6UX98 284 aa6.13□□□□□ -1.43
LSM5-209ENST00000468872 SLC44A3Q8N4M1 653 aa6.13□□□□□ -1.43
LSM5-209ENST00000468872 NSUN7Q8NE18 718 aaKnown RBP6.13□□□□□ -1.43
LSM5-209ENST00000468872 ZNF764Q96H86 408 aaPredicted RBP6.13□□□□□ -1.43
LSM5-209ENST00000468872 LRIG1Q96JA1 1093 aa6.13□□□□□ -1.43
LSM5-209ENST00000468872 BBC3Q96PG8 261 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms