RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 TTC16Q8NEE8 873 aa23.33■■□□□ 1.33
TTC28-204ENST00000468807 MSANTD3Q96H12 275 aa23.33■■□□□ 1.33
TTC28-204ENST00000468807 PKMYT1Q99640 499 aa23.33■■□□□ 1.33
TTC28-204ENST00000468807 CGRRF1Q99675 332 aa23.33■■□□□ 1.33
TTC28-204ENST00000468807 SYT15Q9BQS2 421 aa23.33■■□□□ 1.33
TTC28-204ENST00000468807 CHRDQ9H2X0 955 aa23.33■■□□□ 1.33
TTC28-204ENST00000468807 C8orf33Q9H7E9 229 aaPredicted RBP23.33■■□□□ 1.33
TTC28-204ENST00000468807 KIF26AQ9ULI4 1882 aaPredicted RBP23.32■■□□□ 1.32
TTC28-204ENST00000468807 SPECC1L-ADORA2AF8WAN1 911 aa23.32■■□□□ 1.32
TTC28-204ENST00000468807 EXOC3O60645 756 aa23.32■■□□□ 1.32
TTC28-204ENST00000468807 ATP2C2O75185 946 aa23.32■■□□□ 1.32
TTC28-204ENST00000468807 F11P03951 625 aa23.32■■□□□ 1.32
TTC28-204ENST00000468807 PDGFRBP09619 1106 aa23.32■■□□□ 1.32
TTC28-204ENST00000468807 LMO2P25791 158 aa23.32■■□□□ 1.32
TTC28-204ENST00000468807 WEE1P30291 646 aa23.32■■□□□ 1.32
TTC28-204ENST00000468807 SNRPFP62306 86 aaKnown RBP23.32■■□□□ 1.32
TTC28-204ENST00000468807 PLCB2Q00722 1185 aa23.32■■□□□ 1.32
TTC28-204ENST00000468807 TNK2Q07912 1038 aa23.32■■□□□ 1.32
TTC28-204ENST00000468807 PSMD6Q15008 389 aa23.32■■□□□ 1.32
TTC28-204ENST00000468807 KNOP1Q1ED39 458 aaKnown RBP23.32■■□□□ 1.32
TTC28-204ENST00000468807 C1orf228Q6PIY5 440 aa23.32■■□□□ 1.32
TTC28-204ENST00000468807 C4orf50Q6ZRC1 276 aa23.32■■□□□ 1.32
TTC28-204ENST00000468807 TMEM150AQ86TG1 271 aa23.32■■□□□ 1.32
TTC28-204ENST00000468807 KBTBD7Q8WVZ9 684 aa23.32■■□□□ 1.32
TTC28-204ENST00000468807 TRPC7Q9HCX4 862 aa23.32■■□□□ 1.32
TTC28-204ENST00000468807 PRMT8Q9NR22 394 aaPredicted RBP23.32■■□□□ 1.32
TTC28-204ENST00000468807 EXOC1Q9NV70 894 aa23.32■■□□□ 1.32
TTC28-204ENST00000468807 UXTQ9UBK9 157 aaPredicted RBP23.32■■□□□ 1.32
TTC28-204ENST00000468807 ZMYM5Q9UJ78 669 aa23.32■■□□□ 1.32
TTC28-204ENST00000468807 CDH9Q9ULB4 789 aa23.32■■□□□ 1.32
TTC28-204ENST00000468807 PCDHGA2Q9Y5H1 932 aa23.32■■□□□ 1.32
TTC28-204ENST00000468807 A0A1B0GVL5 298 aa23.31■■□□□ 1.32
TTC28-204ENST00000468807 CST3P01034 146 aaPredicted RBP23.31■■□□□ 1.32
TTC28-204ENST00000468807 SLFN14P0C7P3 912 aa23.31■■□□□ 1.32
TTC28-204ENST00000468807 CHRNB1P11230 501 aa23.31■■□□□ 1.32
TTC28-204ENST00000468807 DDX6P26196 483 aaKnown RBP eCLIP23.31■■□□□ 1.32
TTC28-204ENST00000468807 CTHP32929 405 aa23.31■■□□□ 1.32
TTC28-204ENST00000468807 TNNC1P63316 161 aa23.31■■□□□ 1.32
TTC28-204ENST00000468807 CYP27A1Q02318 531 aa23.31■■□□□ 1.32
TTC28-204ENST00000468807 TRPC3Q13507 836 aa23.31■■□□□ 1.32
TTC28-204ENST00000468807 LRRC32Q14392 662 aa23.31■■□□□ 1.32
TTC28-204ENST00000468807 BMT2Q1RMZ1 405 aa23.31■■□□□ 1.32
TTC28-204ENST00000468807 CFAP221Q4G0U5 840 aa23.31■■□□□ 1.32
TTC28-204ENST00000468807 TXNDC11Q6PKC3 985 aa23.31■■□□□ 1.32
TTC28-204ENST00000468807 MYLPFQ96A32 169 aa23.31■■□□□ 1.32
TTC28-204ENST00000468807 PAGE5Q96GU1 130 aa23.31■■□□□ 1.32
TTC28-204ENST00000468807 FUBP3Q96I24 572 aaKnown RBP eCLIP23.31■■□□□ 1.32
TTC28-204ENST00000468807 SNX25Q9H3E2 840 aa23.31■■□□□ 1.32
TTC28-204ENST00000468807 RBM12Q9NTZ6 932 aaKnown RBP23.31■■□□□ 1.32
TTC28-204ENST00000468807 ZSCAN32Q9NX65 697 aa23.31■■□□□ 1.32
TTC28-204ENST00000468807 MAGEC2Q9UBF1 373 aaPredicted RBP23.31■■□□□ 1.32
TTC28-204ENST00000468807 CCL26Q9Y258 94 aa23.31■■□□□ 1.32
TTC28-204ENST00000468807 GTF3C3Q9Y5Q9 886 aa23.31■■□□□ 1.32
TTC28-204ENST00000468807 PHACTR2O75167 634 aa23.3■■□□□ 1.32
TTC28-204ENST00000468807 NOL4O94818 638 aa23.3■■□□□ 1.32
TTC28-204ENST00000468807 PFKFB1P16118 471 aa23.3■■□□□ 1.32
TTC28-204ENST00000468807 MLLT6P55198 1093 aaPredicted RBP23.3■■□□□ 1.32
TTC28-204ENST00000468807 PPP2R5DQ14738 602 aa23.3■■□□□ 1.32
TTC28-204ENST00000468807 RALGPS2Q86X27 583 aaPredicted RBP23.3■■□□□ 1.32
TTC28-204ENST00000468807 OR6B3Q8NGW1 331 aa23.3■■□□□ 1.32
TTC28-204ENST00000468807 CHAMP1Q96JM3 812 aa23.3■■□□□ 1.32
TTC28-204ENST00000468807 SPATA32Q96LK8 384 aa23.3■■□□□ 1.32
TTC28-204ENST00000468807 GKN1Q9NS71 199 aa23.3■■□□□ 1.32
TTC28-204ENST00000468807 TDP1Q9NUW8 608 aa23.3■■□□□ 1.32
TTC28-204ENST00000468807 CGNQ9P2M7 1197 aaKnown RBP23.3■■□□□ 1.32
TTC28-204ENST00000468807 DMXL1Q9Y485 3027 aa23.29■■□□□ 1.32
TTC28-204ENST00000468807 ACTN4O43707 911 aaKnown RBP23.29■■□□□ 1.32
TTC28-204ENST00000468807 WARSP23381 471 aaKnown RBP23.29■■□□□ 1.32
TTC28-204ENST00000468807 CCR3P51677 355 aa23.29■■□□□ 1.32
TTC28-204ENST00000468807 KRT85P78386 507 aa23.29■■□□□ 1.32
TTC28-204ENST00000468807 PON2Q15165 354 aa23.29■■□□□ 1.32
TTC28-204ENST00000468807 MAPRE1Q15691 268 aaKnown RBP23.29■■□□□ 1.32
TTC28-204ENST00000468807 ITPRIPL2Q3MIP1 535 aa23.29■■□□□ 1.32
TTC28-204ENST00000468807 FAM171BQ6P995 826 aa23.29■■□□□ 1.32
TTC28-204ENST00000468807 GOLGA5Q8TBA6 731 aa23.29■■□□□ 1.32
TTC28-204ENST00000468807 USP13Q92995 863 aaPredicted RBP23.29■■□□□ 1.32
TTC28-204ENST00000468807 MRPL45Q9BRJ2 306 aaKnown RBP23.29■■□□□ 1.32
TTC28-204ENST00000468807 IER2Q9BTL4 223 aa23.29■■□□□ 1.32
TTC28-204ENST00000468807 CRTAC1Q9NQ79 661 aa23.29■■□□□ 1.32
TTC28-204ENST00000468807 NXF1Q9UBU9 619 aaKnown RBP23.29■■□□□ 1.32
TTC28-204ENST00000468807 KLRC4O43908 158 aa23.28■■□□□ 1.32
TTC28-204ENST00000468807 BDNFP23560 247 aa23.28■■□□□ 1.32
TTC28-204ENST00000468807 GNL1P36915 607 aaPredicted RBP23.28■■□□□ 1.32
TTC28-204ENST00000468807 GRIK1P39086 918 aa23.28■■□□□ 1.32
TTC28-204ENST00000468807 CASP4P49662 377 aa23.28■■□□□ 1.32
TTC28-204ENST00000468807 STK4Q13043 487 aa23.28■■□□□ 1.32
TTC28-204ENST00000468807 BIRC3Q13489 604 aa23.28■■□□□ 1.32
TTC28-204ENST00000468807 WDR72Q3MJ13 1102 aa23.28■■□□□ 1.32
TTC28-204ENST00000468807 KMT5BQ4FZB7 885 aa23.28■■□□□ 1.32
TTC28-204ENST00000468807 MDH1BQ5I0G3 518 aa23.28■■□□□ 1.32
TTC28-204ENST00000468807 TRIM68Q6AZZ1 485 aa23.28■■□□□ 1.32
TTC28-204ENST00000468807 CC2D1AQ6P1N0 951 aaPredicted RBP23.28■■□□□ 1.32
TTC28-204ENST00000468807 LIMS2Q7Z4I7 341 aa23.28■■□□□ 1.32
TTC28-204ENST00000468807 MON1AQ86VX9 555 aa23.28■■□□□ 1.32
TTC28-204ENST00000468807 C12orf56Q8IXR9 622 aa23.28■■□□□ 1.32
TTC28-204ENST00000468807 KIAA2013Q8IYS2 634 aa23.28■■□□□ 1.32
TTC28-204ENST00000468807 RUBCNQ92622 972 aa23.28■■□□□ 1.32
TTC28-204ENST00000468807 TRMT2BQ96GJ1 504 aaKnown RBP23.28■■□□□ 1.32
TTC28-204ENST00000468807 EBF3Q9H4W6 596 aa23.28■■□□□ 1.32
TTC28-204ENST00000468807 KIF9Q9HAQ2 790 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms