RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 CASP4P49662 377 aa15.47■□□□□ 0.07
COL27A1-203ENST00000468565 LRMPQ12912 555 aa15.47■□□□□ 0.07
COL27A1-203ENST00000468565 TRPC3Q13507 836 aa15.47■□□□□ 0.07
COL27A1-203ENST00000468565 FAM78AQ5JUQ0 283 aa15.47■□□□□ 0.07
COL27A1-203ENST00000468565 CWF19L1Q69YN2 538 aaKnown RBP15.47■□□□□ 0.07
COL27A1-203ENST00000468565 SHKBP1Q8TBC3 707 aa15.47■□□□□ 0.07
COL27A1-203ENST00000468565 TMC2Q8TDI7 906 aa15.47■□□□□ 0.07
COL27A1-203ENST00000468565 LPIN3Q9BQK8 851 aa15.47■□□□□ 0.07
COL27A1-203ENST00000468565 RMND1Q9NWS8 449 aa15.47■□□□□ 0.07
COL27A1-203ENST00000468565 FRMD4BQ9Y2L6 1034 aa15.47■□□□□ 0.07
COL27A1-203ENST00000468565 COL4A2P08572 1712 aa15.46■□□□□ 0.07
COL27A1-203ENST00000468565 KRBA1A5PL33 1030 aa15.46■□□□□ 0.07
COL27A1-203ENST00000468565 TACC1O75410 805 aa15.46■□□□□ 0.07
COL27A1-203ENST00000468565 SMC2O95347 1197 aa15.46■□□□□ 0.07
COL27A1-203ENST00000468565 ACAT1P24752 427 aaKnown RBP15.46■□□□□ 0.07
COL27A1-203ENST00000468565 GPC5P78333 572 aa15.46■□□□□ 0.07
COL27A1-203ENST00000468565 MYL5Q02045 173 aa15.46■□□□□ 0.07
COL27A1-203ENST00000468565 TEAD2Q15562 447 aa15.46■□□□□ 0.07
COL27A1-203ENST00000468565 FAM171BQ6P995 826 aa15.46■□□□□ 0.07
COL27A1-203ENST00000468565 LRRC8AQ8IWT6 810 aa15.46■□□□□ 0.07
COL27A1-203ENST00000468565 SMARCD2Q92925 531 aa15.46■□□□□ 0.07
COL27A1-203ENST00000468565 FAM122AQ96E09 287 aa15.46■□□□□ 0.07
COL27A1-203ENST00000468565 FUBP3Q96I24 572 aaKnown RBP eCLIP15.46■□□□□ 0.07
COL27A1-203ENST00000468565 VRTNQ9H8Y1 702 aa15.46■□□□□ 0.07
COL27A1-203ENST00000468565 TRPV4Q9HBA0 871 aa15.46■□□□□ 0.07
COL27A1-203ENST00000468565 ZFP14Q9HCL3 533 aa15.46■□□□□ 0.07
COL27A1-203ENST00000468565 ZNF334Q9HCZ1 680 aaPredicted RBP15.46■□□□□ 0.07
COL27A1-203ENST00000468565 CDH9Q9ULB4 789 aa15.46■□□□□ 0.07
COL27A1-203ENST00000468565 PCDHA5Q9Y5H7 936 aa15.46■□□□□ 0.07
COL27A1-203ENST00000468565 WDFY4Q6ZS81 3184 aa15.46■□□□□ 0.07
COL27A1-203ENST00000468565 TICRRQ7Z2Z1 1910 aa15.46■□□□□ 0.06
COL27A1-203ENST00000468565 ANAPC1Q9H1A4 1944 aa15.46■□□□□ 0.06
COL27A1-203ENST00000468565 A0A1W2PRU2 124 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 PHACTR2O75167 634 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 C4BPAP04003 597 aaKnown RBP15.45■□□□□ 0.06
COL27A1-203ENST00000468565 GJA1P17302 382 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 AOC1P19801 751 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 TNNC1P63316 161 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 PFKPQ01813 784 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 ENPEPQ07075 957 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 NCAPHQ15003 741 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 CFAP221Q4G0U5 840 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 IER5LQ5T953 404 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 TDRD10Q5VZ19 366 aaKnown RBP15.45■□□□□ 0.06
COL27A1-203ENST00000468565 CEP135Q66GS9 1140 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 ISM2Q6H9L7 571 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 TANGO2Q6ICL3 276 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 TMEM105Q8N8V8 129 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 FLCNQ8NFG4 579 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 ZSWIM3Q96MP5 696 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 GSDMAQ96QA5 445 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 MMS19Q96T76 1030 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 SYT15Q9BQS2 421 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 PI4K2AQ9BTU6 479 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 XYLT2Q9H1B5 865 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 ARHGEF3Q9NR81 526 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 DACH1Q9UI36 760 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 GTF3C4Q9UKN8 822 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 CA14Q9ULX7 337 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 MAPK8IP1Q9UQF2 711 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 CBFA2T2O43439 604 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 NR2F2P24468 414 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 RPL13P26373 211 aaKnown RBP15.45■□□□□ 0.06
COL27A1-203ENST00000468565 MYL6P60660 151 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 RPL10AP62906 217 aaKnown RBP15.45■□□□□ 0.06
COL27A1-203ENST00000468565 BIRC3Q13489 604 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 MAPRE1Q15691 268 aaKnown RBP15.45■□□□□ 0.06
COL27A1-203ENST00000468565 WDR72Q3MJ13 1102 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 ZCWPW2Q504Y3 356 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 COBLL1Q53SF7 1204 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 PHLDB3Q6NSJ2 640 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 GAREM2Q75VX8 874 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 PRSS33Q8NF86 280 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 SPATA20Q8TB22 786 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 ZSCAN18Q8TBC5 510 aaPredicted RBP15.45■□□□□ 0.06
COL27A1-203ENST00000468565 SMARCE1Q969G3 411 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 E2F7Q96AV8 911 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 PLA2G2FQ9BZM2 168 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 IFNKQ9P0W0 207 aa15.45■□□□□ 0.06
COL27A1-203ENST00000468565 KIF26AQ9ULI4 1882 aaPredicted RBP15.44■□□□□ 0.06
COL27A1-203ENST00000468565 MYBPHLA2RUH7 354 aa15.44■□□□□ 0.06
COL27A1-203ENST00000468565 DYNC1I1O14576 645 aa15.44■□□□□ 0.06
COL27A1-203ENST00000468565 HCRTO43612 131 aa15.44■□□□□ 0.06
COL27A1-203ENST00000468565 PYGBP11216 843 aa15.44■□□□□ 0.06
COL27A1-203ENST00000468565 GABRR2P28476 465 aa15.44■□□□□ 0.06
COL27A1-203ENST00000468565 CDC25CP30307 473 aa15.44■□□□□ 0.06
COL27A1-203ENST00000468565 DLG4P78352 724 aa15.44■□□□□ 0.06
COL27A1-203ENST00000468565 TAF12Q16514 161 aa15.44■□□□□ 0.06
COL27A1-203ENST00000468565 EDRF1Q3B7T1 1238 aa15.44■□□□□ 0.06
COL27A1-203ENST00000468565 ARHGAP15Q53QZ3 475 aa15.44■□□□□ 0.06
COL27A1-203ENST00000468565 C4orf50Q6ZRC1 276 aa15.44■□□□□ 0.06
COL27A1-203ENST00000468565 FILIP1Q7Z7B0 1213 aa15.44■□□□□ 0.06
COL27A1-203ENST00000468565 SPATA2LQ8IUW3 424 aaPredicted RBP15.44■□□□□ 0.06
COL27A1-203ENST00000468565 TRIML1Q8N9V2 468 aa15.44■□□□□ 0.06
COL27A1-203ENST00000468565 GIPC2Q8TF65 315 aa15.44■□□□□ 0.06
COL27A1-203ENST00000468565 MRPL45Q9BRJ2 306 aaKnown RBP15.44■□□□□ 0.06
COL27A1-203ENST00000468565 GTPBP4Q9BZE4 634 aaKnown RBP15.44■□□□□ 0.06
COL27A1-203ENST00000468565 XPO4Q9C0E2 1151 aaKnown RBP15.44■□□□□ 0.06
COL27A1-203ENST00000468565 ATXN3LQ9H3M9 355 aa15.44■□□□□ 0.06
COL27A1-203ENST00000468565 IL21Q9HBE4 155 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms