RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 RPL9P32969 192 aaKnown RBP8.75□□□□□ -1.01
BRCA1-208ENST00000468300 CYP2C18P33260 490 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 NSFP46459 744 aaKnown RBP8.75□□□□□ -1.01
BRCA1-208ENST00000468300 RPL34P49207 117 aaKnown RBP8.75□□□□□ -1.01
BRCA1-208ENST00000468300 PEX5P50542 639 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 GYS2P54840 703 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 GRIK3Q13003 919 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 WSCD1Q658N2 575 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 UBE2Q1Q7Z7E8 422 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 DAAM2Q86T65 1068 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 COLGALT2Q8IYK4 626 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 ZNF564Q8TBZ8 553 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-208ENST00000468300 ALG3Q92685 438 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 MS4A14Q96JA4 679 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 HEXIM2Q96MH2 286 aaKnown RBP8.75□□□□□ -1.01
BRCA1-208ENST00000468300 CASD1Q96PB1 797 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 PSMB7Q99436 277 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 HIPK3Q9H422 1215 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 CXorf56Q9H5V9 222 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 UBN1Q9NPG3 1134 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 UVRAGQ9P2Y5 699 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 KLF15Q9UIH9 416 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 FBXO9Q9UK97 447 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-208ENST00000468300 HMGB1P1B2RPK0 211 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-208ENST00000468300 MYBL1P10243 752 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 MARCKSL1P49006 195 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 GATMP50440 423 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 CCL23P55773 120 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 RPL7AP62424 266 aaKnown RBP8.74□□□□□ -1.01
BRCA1-208ENST00000468300 DAB2IPQ5VWQ8 1189 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 ARHGAP17Q68EM7 881 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 RNF169Q8NCN4 708 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 UBA3Q8TBC4 463 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 SLC35F5Q8WV83 523 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 KRT35Q92764 455 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 PGBD4Q96DM1 585 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 MRRFQ96E11 262 aaKnown RBP8.74□□□□□ -1.01
BRCA1-208ENST00000468300 SENP8Q96LD8 212 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 PKMYT1Q99640 499 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 FTHL17Q9BXU8 183 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 ELAC1Q9H777 363 aaKnown RBP8.74□□□□□ -1.01
BRCA1-208ENST00000468300 RMI1Q9H9A7 625 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 ADAM22Q9P0K1 906 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 CTTNBP2NLQ9P2B4 639 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 HCSTQ9UBK5 93 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 TSPAN16Q9UKR8 245 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 TRIM43BA6NCK2 446 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 M0QZQ0 153 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 CYB561D2O14569 222 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 PDGFRBP09619 1106 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 FAM163BP0C2L3 166 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 COMTP21964 271 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 GNL1P36915 607 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-208ENST00000468300 TUSC3Q13454 348 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 TUBB2AQ13885 445 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 WHAMMP3Q1A5X7 153 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 CYP4A22Q5TCH4 519 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 TRNP1Q6NT89 227 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 DPH6Q7L8W6 267 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 XYLT1Q86Y38 959 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 ADGRF2Q8IZF7 708 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 APPL2Q8NEU8 664 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 KHSRPQ92945 711 aaKnown RBP eCLIP8.74□□□□□ -1.014e-9■■■□□ 15.2
BRCA1-208ENST00000468300 TRIM43Q96BQ3 446 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-208ENST00000468300 PIWIL1Q96J94 861 aaKnown RBP8.74□□□□□ -1.01
BRCA1-208ENST00000468300 TUBB2BQ9BVA1 445 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 CRTAC1Q9NQ79 661 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 TMEM30AQ9NV96 361 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 TMEM161AQ9NX61 479 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 DNAJB4Q9UDY4 337 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.74□□□□□ -1.01
BRCA1-208ENST00000468300 V9GYY5 206 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-208ENST00000468300 TMEM191CA6NGB0 347 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 I3L4J1 428 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 MED7O43513 233 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 HSPA1AP0DMV8 641 aaKnown RBP8.74□□□□□ -1.01
BRCA1-208ENST00000468300 HSPA1BP0DMV9 641 aaKnown RBP8.74□□□□□ -1.01
BRCA1-208ENST00000468300 CCDC130P13994 396 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 CD19P15391 556 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 PDCLQ13371 301 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 PKN2Q16513 984 aaKnown RBP8.74□□□□□ -1.01
BRCA1-208ENST00000468300 SGO2Q562F6 1265 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 DNAJC21Q5F1R6 531 aaKnown RBP8.74□□□□□ -1.01
BRCA1-208ENST00000468300 PMF1Q6P1K2 205 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 HACE1Q8IYU2 909 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 CACTIN-AS1Q8N1I8 211 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 TTC39CQ8N584 583 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 ARFGAP1Q8N6T3 406 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 ANKLE1Q8NAG6 615 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 NOA1Q8NC60 698 aaKnown RBP8.74□□□□□ -1.01
BRCA1-208ENST00000468300 TMEM35BQ8NCS4 154 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 PAWRQ96IZ0 340 aaKnown RBP8.74□□□□□ -1.01
BRCA1-208ENST00000468300 FAM210AQ96ND0 272 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 RPS6KC1Q96S38 1066 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 IRF2BPLQ9H1B7 796 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 EPC1Q9H2F5 836 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 FAM49BQ9NUQ9 324 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 TBC1D13Q9NVG8 400 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 KIAA1257Q9ULG3 409 aa8.74□□□□□ -1.01
BRCA1-208ENST00000468300 CES2O00748 559 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms