RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 GPSM2P81274 684 aa5.02□□□□□ -1.61
XRN1-206ENST00000467077 FAPQ12884 760 aa5.02□□□□□ -1.61
XRN1-206ENST00000467077 STRN3Q13033 797 aa5.02□□□□□ -1.61
XRN1-206ENST00000467077 FOXP4Q8IVH2 680 aaPredicted RBP5.02□□□□□ -1.61
XRN1-206ENST00000467077 DCP1BQ8IZD4 617 aaKnown RBP5.02□□□□□ -1.61
XRN1-206ENST00000467077 RP9Q8TA86 221 aaKnown RBP5.02□□□□□ -1.61
XRN1-206ENST00000467077 FAM234AQ9H0X4 552 aa5.02□□□□□ -1.61
XRN1-206ENST00000467077 BRD9Q9H8M2 597 aa5.02□□□□□ -1.61
XRN1-206ENST00000467077 SHROOM4Q9ULL8 1493 aa5.01□□□□□ -1.61
XRN1-206ENST00000467077 TOMM40O96008 361 aa5.01□□□□□ -1.61
XRN1-206ENST00000467077 MYCLP1P12525 358 aaPredicted RBP5.01□□□□□ -1.61
XRN1-206ENST00000467077 GPR3P46089 330 aa5.01□□□□□ -1.61
XRN1-206ENST00000467077 ZNF135P52742 658 aaPredicted RBP5.01□□□□□ -1.61
XRN1-206ENST00000467077 TPTEP56180 551 aa5.01□□□□□ -1.61
XRN1-206ENST00000467077 ZNF585BQ52M93 769 aa5.01□□□□□ -1.61
XRN1-206ENST00000467077 CCDC93Q567U6 631 aa5.01□□□□□ -1.61
XRN1-206ENST00000467077 MEX3CQ5U5Q3 659 aaKnown RBP5.01□□□□□ -1.61
XRN1-206ENST00000467077 ICE2Q659A1 982 aa5.01□□□□□ -1.61
XRN1-206ENST00000467077 SFRP4Q6FHJ7 346 aaPredicted RBP5.01□□□□□ -1.61
XRN1-206ENST00000467077 GSG1LQ6UXU4 331 aa5.01□□□□□ -1.61
XRN1-206ENST00000467077 DDX46Q7L014 1031 aaKnown RBP5.01□□□□□ -1.61
XRN1-206ENST00000467077 PARS2Q7L3T8 475 aaKnown RBP5.01□□□□□ -1.61
XRN1-206ENST00000467077 HDAC10Q969S8 669 aa5.01□□□□□ -1.61
XRN1-206ENST00000467077 WBP1Q96G27 269 aa5.01□□□□□ -1.61
XRN1-206ENST00000467077 RLIMQ9NVW2 624 aa5.01□□□□□ -1.61
XRN1-206ENST00000467077 CFAP97Q9P2B7 532 aa5.01□□□□□ -1.61
XRN1-206ENST00000467077 PCDHA13Q9Y5I0 950 aa5.01□□□□□ -1.61
XRN1-206ENST00000467077 SCRIBQ14160 1630 aa5.01□□□□□ -1.61
XRN1-206ENST00000467077 FZD9O00144 591 aa5□□□□□ -1.61
XRN1-206ENST00000467077 RNF8O76064 485 aa5□□□□□ -1.61
XRN1-206ENST00000467077 FESP07332 822 aa5□□□□□ -1.61
XRN1-206ENST00000467077 GCLCP48506 637 aaPredicted RBP5□□□□□ -1.61
XRN1-206ENST00000467077 KRTAP10-5P60370 271 aa5□□□□□ -1.61
XRN1-206ENST00000467077 TBC1D25Q3MII6 688 aa5□□□□□ -1.61
XRN1-206ENST00000467077 PPM1NQ8N819 430 aa5□□□□□ -1.61
XRN1-206ENST00000467077 TERB1Q8NA31 727 aa5□□□□□ -1.61
XRN1-206ENST00000467077 ABHD11Q8NFV4 315 aa5□□□□□ -1.61
XRN1-206ENST00000467077 AHCYL2Q96HN2 611 aaKnown RBP5□□□□□ -1.61
XRN1-206ENST00000467077 PUS7Q96PZ0 661 aaKnown RBP5□□□□□ -1.61
XRN1-206ENST00000467077 SLC2A13Q96QE2 648 aa5□□□□□ -1.61
XRN1-206ENST00000467077 EFHD1Q9BUP0 239 aa5□□□□□ -1.61
XRN1-206ENST00000467077 TINAGL1Q9GZM7 467 aaPredicted RBP5□□□□□ -1.61
XRN1-206ENST00000467077 MAN1C1Q9NR34 630 aa5□□□□□ -1.61
XRN1-206ENST00000467077 GNL3LQ9NVN8 582 aaKnown RBP5□□□□□ -1.61
XRN1-206ENST00000467077 USP35Q9P2H5 1018 aa5□□□□□ -1.61
XRN1-206ENST00000467077 A0A087X0B3 334 aa4.99□□□□□ -1.61
XRN1-206ENST00000467077 SERINC4A6NH21 518 aa4.99□□□□□ -1.61
XRN1-206ENST00000467077 TMEM232C9JQI7 657 aa4.99□□□□□ -1.61
XRN1-206ENST00000467077 WASP42768 502 aa4.99□□□□□ -1.61
XRN1-206ENST00000467077 TLE1Q04724 770 aa4.99□□□□□ -1.61
XRN1-206ENST00000467077 ZNF91Q05481 1191 aa4.99□□□□□ -1.61
XRN1-206ENST00000467077 HABP2Q14520 560 aaPredicted RBP4.99□□□□□ -1.61
XRN1-206ENST00000467077 DGKKQ5KSL6 1271 aa4.99□□□□□ -1.61
XRN1-206ENST00000467077 ZNF549Q6P9A3 640 aa4.99□□□□□ -1.61
XRN1-206ENST00000467077 NOP9Q86U38 636 aaKnown RBP4.99□□□□□ -1.61
XRN1-206ENST00000467077 SNX18Q96RF0 628 aa4.99□□□□□ -1.61
XRN1-206ENST00000467077 GLOD4Q9HC38 313 aa4.99□□□□□ -1.61
XRN1-206ENST00000467077 VTA1Q9NP79 307 aa4.99□□□□□ -1.61
XRN1-206ENST00000467077 ZMYM2Q9UBW7 1377 aa4.99□□□□□ -1.61
XRN1-206ENST00000467077 CYP19A1P11511 503 aaPredicted RBP4.98□□□□□ -1.61
XRN1-206ENST00000467077 HOXD9P28356 352 aaPredicted RBP4.98□□□□□ -1.61
XRN1-206ENST00000467077 ME1P48163 572 aa4.98□□□□□ -1.61
XRN1-206ENST00000467077 TMEM108Q6UXF1 575 aa4.98□□□□□ -1.61
XRN1-206ENST00000467077 COLCA1Q6ZS62 124 aa4.98□□□□□ -1.61
XRN1-206ENST00000467077 CALCOCO1Q9P1Z2 691 aa4.98□□□□□ -1.61
XRN1-206ENST00000467077 TBX22Q9Y458 520 aa4.98□□□□□ -1.61
XRN1-206ENST00000467077 C4orf47A7E2U8 309 aa4.97□□□□□ -1.61
XRN1-206ENST00000467077 ENPP3O14638 875 aa4.97□□□□□ -1.61
XRN1-206ENST00000467077 BRINP1O60477 761 aa4.97□□□□□ -1.61
XRN1-206ENST00000467077 TULP3O75386 442 aa4.97□□□□□ -1.61
XRN1-206ENST00000467077 GAS8-AS1O95177 125 aa4.97□□□□□ -1.61
XRN1-206ENST00000467077 KIF20AO95235 890 aa4.97□□□□□ -1.61
XRN1-206ENST00000467077 PDE8BO95263 885 aa4.97□□□□□ -1.61
XRN1-206ENST00000467077 GJB1P08034 283 aa4.97□□□□□ -1.61
XRN1-206ENST00000467077 AGXTP21549 392 aa4.97□□□□□ -1.61
XRN1-206ENST00000467077 RENBPP51606 427 aa4.97□□□□□ -1.61
XRN1-206ENST00000467077 ID2Q02363 134 aa4.97□□□□□ -1.61
XRN1-206ENST00000467077 SRSF1Q07955 248 aaKnown RBP eCLIP4.97□□□□□ -1.61
XRN1-206ENST00000467077 PPP4R3AQ6IN85 833 aa4.97□□□□□ -1.61
XRN1-206ENST00000467077 Q6ZWC4 215 aa4.97□□□□□ -1.61
XRN1-206ENST00000467077 KIAA0907Q7Z7F0 614 aaPredicted RBP4.97□□□□□ -1.61
XRN1-206ENST00000467077 AMOTL1Q8IY63 956 aa4.97□□□□□ -1.61
XRN1-206ENST00000467077 XAGE5Q8WWM1 108 aa4.97□□□□□ -1.61
XRN1-206ENST00000467077 SIDT1Q9NXL6 827 aaKnown RBP4.97□□□□□ -1.61
XRN1-206ENST00000467077 TFCP2L1Q9NZI6 479 aa4.97□□□□□ -1.61
XRN1-206ENST00000467077 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.97□□□□□ -1.61
XRN1-206ENST00000467077 WASHC2AQ641Q2 1341 aa4.97□□□□□ -1.61
XRN1-206ENST00000467077 DLDP09622 509 aaKnown RBP4.96□□□□□ -1.62
XRN1-206ENST00000467077 CYP2C19P33261 490 aa4.96□□□□□ -1.62
XRN1-206ENST00000467077 SLC16A1P53985 500 aa4.96□□□□□ -1.62
XRN1-206ENST00000467077 TMPRSS15P98073 1019 aa4.96□□□□□ -1.62
XRN1-206ENST00000467077 ANKRD13BQ86YJ7 626 aa4.96□□□□□ -1.62
XRN1-206ENST00000467077 ARFGAP1Q8N6T3 406 aa4.96□□□□□ -1.62
XRN1-206ENST00000467077 OSR1Q8TAX0 266 aaPredicted RBP4.96□□□□□ -1.62
XRN1-206ENST00000467077 NR4A3Q92570 626 aa4.96□□□□□ -1.62
XRN1-206ENST00000467077 CLPTM1LQ96KA5 538 aa4.96□□□□□ -1.62
XRN1-206ENST00000467077 MRGPRX4Q96LA9 322 aa4.96□□□□□ -1.62
XRN1-206ENST00000467077 FYTTD1Q96QD9 318 aaKnown RBP4.96□□□□□ -1.62
XRN1-206ENST00000467077 ZPBPQ9BS86 351 aa4.96□□□□□ -1.62
XRN1-206ENST00000467077 CIPCQ9C0C6 399 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms