RNA–Protein interactions for RNA: ENST00000465788.1

SRM-203, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 402 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-203ENST00000465788 SNX9Q9Y5X1 595 aa13.75□□□□□ -0.21
SRM-203ENST00000465788 SPTBN2O15020 2390 aa13.75□□□□□ -0.21
SRM-203ENST00000465788 TPRP12270 2363 aaKnown RBP13.74□□□□□ -0.21
SRM-203ENST00000465788 TRAV19A0A0A6YYK7 116 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 MED19A0JLT2 244 aaPredicted RBP13.74□□□□□ -0.21
SRM-203ENST00000465788 TULP1O00294 542 aaPredicted RBP13.74□□□□□ -0.21
SRM-203ENST00000465788 GABRDO14764 452 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 PPP6R2O75170 966 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 AKAP3O75969 853 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 FAM163BP0C2L3 166 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 TGM1P22735 817 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 CASP5P51878 434 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 TNK2Q07912 1038 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 NR1H3Q13133 447 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 CSRP2Q16527 193 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 DUOXA2Q1HG44 320 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 TMEM196Q5HYL7 178 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 VSTM1Q6UX27 236 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 Q6ZS52 159 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 TMEM150AQ86TG1 271 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 GPIHBP1Q8IV16 184 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 CAMKK1Q8N5S9 505 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 KIAA1958Q8N8K9 716 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 NOC3LQ8WTT2 800 aaKnown RBP13.74□□□□□ -0.21
SRM-203ENST00000465788 USP13Q92995 863 aaPredicted RBP13.74□□□□□ -0.21
SRM-203ENST00000465788 ZNF396Q96N95 335 aaPredicted RBP13.74□□□□□ -0.21
SRM-203ENST00000465788 USP28Q96RU2 1077 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 CBWD1Q9BRT8 395 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 MTMR12Q9C0I1 747 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 IKZF4Q9H2S9 585 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 MAGEF1Q9HAY2 307 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 PDE11AQ9HCR9 933 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 TMLHEQ9NVH6 421 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 INTS13Q9NVM9 706 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 CDH9Q9ULB4 789 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 SLC8A2Q9UPR5 921 aa13.74□□□□□ -0.21
SRM-203ENST00000465788 UBE4BO95155 1302 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 GREB1Q4ZG55 1949 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 ANAPC1Q9H1A4 1944 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 GOLGA8IPA6NC78 632 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 GOLGA8JA6NMD2 632 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 HRO43593 1189 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 STX6O43752 255 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 PRPF6O94906 941 aaKnown RBP13.73□□□□□ -0.21
SRM-203ENST00000465788 TCF3P15923 654 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 PPP3CCP48454 512 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 IFNAR2P48551 515 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 ATXN1P54253 815 aaKnown RBP13.73□□□□□ -0.21
SRM-203ENST00000465788 SPEM2Q0P670 501 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 TXNDC8Q6A555 127 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 CNNM4Q6P4Q7 775 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 WDR49Q8IV35 697 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 IQUBQ8NA54 791 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 TTC8Q8TAM2 541 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 CXorf38Q8TB03 319 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 DDX1Q92499 740 aaKnown RBP13.73□□□□□ -0.21
SRM-203ENST00000465788 ATP2A3Q93084 1043 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 HPDLQ96IR7 371 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 SPATA17Q96L03 361 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 PKMYT1Q99640 499 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 PCIF1Q9H4Z3 704 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 CGNQ9P2M7 1197 aaKnown RBP13.73□□□□□ -0.21
SRM-203ENST00000465788 MAGEC2Q9UBF1 373 aaPredicted RBP13.73□□□□□ -0.21
SRM-203ENST00000465788 SIX4Q9UIU6 781 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 GTF3C4Q9UKN8 822 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 MTMR6Q9Y217 621 aa13.73□□□□□ -0.21
SRM-203ENST00000465788 ATG2BQ96BY7 2078 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 SLC30A4O14863 429 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 SPTLC2O15270 562 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 YEATS4O95619 227 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 CKMP06732 381 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 CYP2F1P24903 491 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 ANXA13P27216 316 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 WNT7BP56706 349 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 KCNB1Q14721 858 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 MTF1Q14872 753 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 LPAL2Q16609 132 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 DDR2Q16832 855 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 SOWAHAQ2M3V2 549 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 HEATR6Q6AI08 1181 aaKnown RBP13.72□□□□□ -0.21
SRM-203ENST00000465788 FAM173BQ6P4H8 233 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 FAM171BQ6P995 826 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 LIMS2Q7Z4I7 341 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 SCN4BQ8IWT1 228 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 PDILTQ8N807 584 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 LINC00301Q8NCQ3 95 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 OSCP1Q8WVF1 389 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 ACDQ96AP0 544 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 FNBP1Q96RU3 617 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 SYT15Q9BQS2 421 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 PANK2Q9BZ23 570 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 SMG9Q9H0W8 520 aaKnown RBP13.72□□□□□ -0.21
SRM-203ENST00000465788 EBF3Q9H4W6 596 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 PARD6AQ9NPB6 346 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 HPS4Q9NQG7 708 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 SEMA4GQ9NTN9 838 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 KBTBD4Q9NVX7 518 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 CCL26Q9Y258 94 aa13.72□□□□□ -0.21
SRM-203ENST00000465788 HELZP42694 1942 aaKnown RBP13.72□□□□□ -0.21
SRM-203ENST00000465788 SDK1Q7Z5N4 2213 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms