RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	USP14	P54578	494 aa		6.15	□□□□□ -1.42
CACNA1C-223	ENST00000465278	PLS1	Q14651	629 aa		6.15	□□□□□ -1.42
CACNA1C-223	ENST00000465278	UBXN2B	Q14CS0	331 aa		6.15	□□□□□ -1.42
CACNA1C-223	ENST00000465278	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	6.15	□□□□□ -1.42
CACNA1C-223	ENST00000465278	GPRIN1	Q7Z2K8	1008 aa		6.15	□□□□□ -1.42
CACNA1C-223	ENST00000465278	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	6.15	□□□□□ -1.42
CACNA1C-223	ENST00000465278	FAM156A	Q8NDB6	213 aa		6.15	□□□□□ -1.42
CACNA1C-223	ENST00000465278	CHST13	Q8NET6	341 aa		6.15	□□□□□ -1.42
CACNA1C-223	ENST00000465278	MDGA1	Q8NFP4	955 aa		6.15	□□□□□ -1.42
CACNA1C-223	ENST00000465278	DNER	Q8NFT8	737 aa		6.15	□□□□□ -1.42
CACNA1C-223	ENST00000465278	RELT	Q969Z4	430 aa		6.15	□□□□□ -1.42
CACNA1C-223	ENST00000465278	MIEF2	Q96C03	454 aa		6.15	□□□□□ -1.42
CACNA1C-223	ENST00000465278	SLC35A4	Q96G79	324 aa		6.15	□□□□□ -1.42
CACNA1C-223	ENST00000465278	FAM193B	Q96PV7	902 aa	Predicted RBP	6.15	□□□□□ -1.42
CACNA1C-223	ENST00000465278	C1orf43	Q9BWL3	253 aa		6.15	□□□□□ -1.42
CACNA1C-223	ENST00000465278	B3GNT5	Q9BYG0	378 aa		6.15	□□□□□ -1.42
CACNA1C-223	ENST00000465278	SLAMF7	Q9NQ25	335 aa		6.15	□□□□□ -1.42
CACNA1C-223	ENST00000465278	FBXO34	Q9NWN3	711 aa		6.15	□□□□□ -1.42
CACNA1C-223	ENST00000465278	CPA4	Q9UI42	421 aa		6.15	□□□□□ -1.42
CACNA1C-223	ENST00000465278	PCDHA6	Q9UN73	950 aa		6.15	□□□□□ -1.42
CACNA1C-223	ENST00000465278	RPGRIP1L	Q68CZ1	1315 aa		6.15	□□□□□ -1.43
CACNA1C-223	ENST00000465278	RAB3GAP2	Q9H2M9	1393 aa		6.15	□□□□□ -1.43
CACNA1C-223	ENST00000465278	ZNF318	Q5VUA4	2279 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	FOXD2	O60548	495 aa	Predicted RBP	6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	CD1A	P06126	327 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	TYR	P14679	529 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	SLC6A2	P23975	617 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	SLC6A4	P31645	630 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	TBX4	P57082	545 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	NKX6-1	P78426	367 aa	Predicted RBP	6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	DDR1	Q08345	913 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	GALE	Q14376	348 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	GBX1	Q14549	363 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	PPP4R4	Q6NUP7	873 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	MAMDC4	Q6UXC1	1216 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278		Q6ZRM9	215 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	CCDC149	Q6ZUS6	474 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	SEM1	Q6ZVN7	128 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	USP50	Q70EL3	339 aa	Predicted RBP	6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	MED25	Q71SY5	747 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	UBE2Q1	Q7Z7E8	422 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	CCAR1	Q8IX12	1150 aa	Known RBP	6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	GPC2	Q8N158	579 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	ZFP28	Q8NHY6	868 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	TNPO1	Q92973	898 aa	Known RBP	6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	ADO	Q96SZ5	270 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	MNT	Q99583	582 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	NDC1	Q9BTX1	674 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	EPHX3	Q9H6B9	360 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	CD248	Q9HCU0	757 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	PIK3C2G	O75747	1445 aa		6.14	□□□□□ -1.43
CACNA1C-223	ENST00000465278	DRGX	A6NNA5	263 aa		6.13	□□□□□ -1.43
CACNA1C-223	ENST00000465278	NT5C1B-RDH14	C9J2C7	533 aa		6.13	□□□□□ -1.43
CACNA1C-223	ENST00000465278		K7ESM1	405 aa		6.13	□□□□□ -1.43
CACNA1C-223	ENST00000465278	PJA2	O43164	708 aa		6.13	□□□□□ -1.43
CACNA1C-223	ENST00000465278	IPO13	O94829	963 aa	Known RBP	6.13	□□□□□ -1.43
CACNA1C-223	ENST00000465278	PRSS23	O95084	383 aa		6.13	□□□□□ -1.43
CACNA1C-223	ENST00000465278	AHSG	P02765	367 aa		6.13	□□□□□ -1.43
CACNA1C-223	ENST00000465278	SCNN1G	P51170	649 aa		6.13	□□□□□ -1.43
CACNA1C-223	ENST00000465278	SLC4A8	Q2Y0W8	1093 aa		6.13	□□□□□ -1.43
CACNA1C-223	ENST00000465278	PABPC1L	Q4VXU2	614 aa	Known RBP	6.13	□□□□□ -1.43
CACNA1C-223	ENST00000465278	UTP14C	Q5TAP6	766 aa	Known RBP	6.13	□□□□□ -1.43
CACNA1C-223	ENST00000465278	DOK3	Q7L591	496 aa		6.13	□□□□□ -1.43
CACNA1C-223	ENST00000465278	PPP1R3B	Q86XI6	285 aa		6.13	□□□□□ -1.43
CACNA1C-223	ENST00000465278	SYT12	Q8IV01	421 aa		6.13	□□□□□ -1.43
CACNA1C-223	ENST00000465278	ANKRD35	Q8N283	1001 aa		6.13	□□□□□ -1.43
CACNA1C-223	ENST00000465278	CELF5	Q8N6W0	485 aa	Known RBP	6.13	□□□□□ -1.43
CACNA1C-223	ENST00000465278	IL17RD	Q8NFM7	739 aa		6.13	□□□□□ -1.43
CACNA1C-223	ENST00000465278	OR52N2	Q8NGI0	321 aa		6.13	□□□□□ -1.43
CACNA1C-223	ENST00000465278	FAM89A	Q96GI7	184 aa		6.13	□□□□□ -1.43
CACNA1C-223	ENST00000465278	GLIS2	Q9BZE0	524 aa	Predicted RBP	6.13	□□□□□ -1.43
CACNA1C-223	ENST00000465278	SLC45A2	Q9UMX9	530 aa		6.13	□□□□□ -1.43
CACNA1C-223	ENST00000465278	FAM50B	Q9Y247	325 aa		6.13	□□□□□ -1.43
CACNA1C-223	ENST00000465278	FAM208B	Q5VWN6	2430 aa		6.13	□□□□□ -1.43
CACNA1C-223	ENST00000465278	XIRP2	A4UGR9	3374 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278		A0A088AWK7	358 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	LEFTY2	O00292	366 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	ZNF292	O60281	2723 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	CAND2	O75155	1236 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	ARIH2	O95376	493 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	AMH	P03971	560 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	KRT18	P05783	430 aa	Known RBP	6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	MTHFD1	P11586	935 aa	Known RBP	6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	PRDX5	P30044	214 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	XDH	P47989	1333 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	CHN2	P52757	468 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	RABGGTB	P53611	331 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	FGL2	Q14314	439 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	ATP2B3	Q16720	1220 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	KIAA0753	Q2KHM9	967 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	MAP9	Q49MG5	647 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	ANO6	Q4KMQ2	910 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	COBLL1	Q53SF7	1204 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	HS1BP3	Q53T59	392 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	KHDC1L	Q5JSQ8	128 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	DACT2	Q5SW24	774 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	C1QL3	Q5VWW1	255 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	CHST15	Q7LFX5	561 aa	Predicted RBP	6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	ARHGEF25	Q86VW2	580 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	NAV2	Q8IVL1	2488 aa		6.12	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms