RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 RING1Q06587 406 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 USP4Q13107 963 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 IL17AQ16552 155 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 LRSAM1Q6UWE0 723 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 DTHD1Q6ZMT9 781 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 CCDC83Q8IWF9 413 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 SYT2Q8N9I0 419 aaPredicted RBP12.98□□□□□ -0.33
TRA2B-208ENST00000465245 FBXO18Q8NFZ0 1043 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 CCDC26Q8TAB7 109 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 OSCP1Q8WVF1 389 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 PIGKQ92643 395 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 PI4K2AQ9BTU6 479 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 TRPC7Q9HCX4 862 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 KCND2Q9NZV8 630 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 CPSF3Q9UKF6 684 aaKnown RBP12.98□□□□□ -0.33
TRA2B-208ENST00000465245 DERAQ9Y315 318 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 PCDHB5Q9Y5E4 795 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 WNT6Q9Y6F9 365 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 A0A0B4J269 797 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 NPHP3-ACAD11A0A0J9YXS1 232 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 K7ENM7 598 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 HYAL3O43820 417 aaPredicted RBP12.97□□□□□ -0.33
TRA2B-208ENST00000465245 EIF5BO60841 1220 aaKnown RBP12.97□□□□□ -0.33
TRA2B-208ENST00000465245 PRPF40AO75400 957 aaKnown RBP12.97□□□□□ -0.33
TRA2B-208ENST00000465245 TADA3O75528 432 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 PIGRP01833 764 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 PLA2G4BP0C869 781 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 PRPHP41219 470 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 SLC12A3P55017 1021 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 SEC13P55735 322 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 TSPY1Q01534 308 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 LMAN2Q12907 356 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 NR1H3Q13133 447 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 ZNF77Q15935 545 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 EML3Q32P44 896 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 C2orf27AQ580R0 203 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 TRIM61Q5EBN2 209 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 WSCD1Q658N2 575 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 RASSF3Q86WH2 238 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 TTC30AQ86WT1 665 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 CNOT6LQ96LI5 555 aaKnown RBP12.97□□□□□ -0.33
TRA2B-208ENST00000465245 PNMA5Q96PV4 448 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 PLIN2Q99541 437 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 NUSAP1Q9BXS6 441 aaKnown RBP12.97□□□□□ -0.33
TRA2B-208ENST00000465245 SLC32A1Q9H598 525 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 TMEM206Q9H813 350 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 UXTQ9UBK9 157 aaPredicted RBP12.97□□□□□ -0.33
TRA2B-208ENST00000465245 EVLQ9UI08 416 aaPredicted RBP12.97□□□□□ -0.33
TRA2B-208ENST00000465245 NEUROG3Q9Y4Z2 214 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 GON4LQ3T8J9 2241 aa12.97□□□□□ -0.33
TRA2B-208ENST00000465245 GCN1Q92616 2671 aaKnown RBP12.96□□□□□ -0.33
TRA2B-208ENST00000465245 TRAV19A0A0A6YYK7 116 aa12.96□□□□□ -0.33
TRA2B-208ENST00000465245 USP17L7P0C7H9 530 aa12.96□□□□□ -0.33
TRA2B-208ENST00000465245 MAPK8P45983 427 aa12.96□□□□□ -0.33
TRA2B-208ENST00000465245 ACOT2P49753 483 aa12.96□□□□□ -0.33
TRA2B-208ENST00000465245 TOB1P50616 345 aaPredicted RBP12.96□□□□□ -0.33
TRA2B-208ENST00000465245 DDR2Q16832 855 aa12.96□□□□□ -0.33
TRA2B-208ENST00000465245 SV2CQ496J9 727 aa12.96□□□□□ -0.33
TRA2B-208ENST00000465245 HYIQ5T013 277 aa12.96□□□□□ -0.33
TRA2B-208ENST00000465245 SDHAF4Q5VUM1 108 aa12.96□□□□□ -0.33
TRA2B-208ENST00000465245 EFCAB13Q8IY85 973 aa12.96□□□□□ -0.33
TRA2B-208ENST00000465245 FAM184AQ8NB25 1140 aa12.96□□□□□ -0.33
TRA2B-208ENST00000465245 MDGA1Q8NFP4 955 aa12.96□□□□□ -0.33
TRA2B-208ENST00000465245 USP33Q8TEY7 942 aa12.96□□□□□ -0.33
TRA2B-208ENST00000465245 KCNN1Q92952 543 aa12.96□□□□□ -0.33
TRA2B-208ENST00000465245 CDK5RAP3Q96JB5 506 aa12.96□□□□□ -0.33
TRA2B-208ENST00000465245 CYP2S1Q96SQ9 504 aa12.96□□□□□ -0.33
TRA2B-208ENST00000465245 CCSER1Q9C0I3 900 aa12.96□□□□□ -0.33
TRA2B-208ENST00000465245 TMLHEQ9NVH6 421 aa12.96□□□□□ -0.33
TRA2B-208ENST00000465245 DPP3Q9NY33 737 aa12.96□□□□□ -0.33
TRA2B-208ENST00000465245 KLK13Q9UKR3 277 aa12.96□□□□□ -0.33
TRA2B-208ENST00000465245 CIZ1Q9ULV3 898 aaPredicted RBP12.96□□□□□ -0.33
TRA2B-208ENST00000465245 ADAMTS20P59510 1910 aa12.96□□□□□ -0.34
TRA2B-208ENST00000465245 ALDH1A2O94788 518 aa12.95□□□□□ -0.34
TRA2B-208ENST00000465245 NFATC1O95644 943 aa12.95□□□□□ -0.34
TRA2B-208ENST00000465245 SCP2P22307 547 aa12.95□□□□□ -0.34
TRA2B-208ENST00000465245 RPL10AP62906 217 aaKnown RBP12.95□□□□□ -0.34
TRA2B-208ENST00000465245 HMGN5P82970 282 aaKnown RBP12.95□□□□□ -0.34
TRA2B-208ENST00000465245 NFE2Q16621 373 aaPredicted RBP12.95□□□□□ -0.34
TRA2B-208ENST00000465245 ARSHQ5FYA8 562 aa12.95□□□□□ -0.34
TRA2B-208ENST00000465245 SLC39A4Q6P5W5 647 aa12.95□□□□□ -0.34
TRA2B-208ENST00000465245 ARMCX6Q7L4S7 300 aa12.95□□□□□ -0.34
TRA2B-208ENST00000465245 LPCAT2Q7L5N7 544 aa12.95□□□□□ -0.34
TRA2B-208ENST00000465245 CCDC33Q8N5R6 958 aa12.95□□□□□ -0.34
TRA2B-208ENST00000465245 KCTD17Q8N5Z5 321 aa12.95□□□□□ -0.34
TRA2B-208ENST00000465245 SH3RF2Q8TEC5 729 aa12.95□□□□□ -0.34
TRA2B-208ENST00000465245 TRMT2BQ96GJ1 504 aaKnown RBP12.95□□□□□ -0.34
TRA2B-208ENST00000465245 SPACA7Q96KW9 195 aa12.95□□□□□ -0.34
TRA2B-208ENST00000465245 SLC22A12Q96S37 553 aa12.95□□□□□ -0.34
TRA2B-208ENST00000465245 REEP2Q9BRK0 252 aa12.95□□□□□ -0.34
TRA2B-208ENST00000465245 LLPHQ9BRT6 129 aaKnown RBP12.95□□□□□ -0.34
TRA2B-208ENST00000465245 ASB7Q9H672 318 aa12.95□□□□□ -0.34
TRA2B-208ENST00000465245 ODF2LQ9ULJ1 636 aa12.95□□□□□ -0.34
TRA2B-208ENST00000465245 MMP17Q9ULZ9 603 aa12.95□□□□□ -0.34
TRA2B-208ENST00000465245 MSRB2Q9Y3D2 182 aa12.95□□□□□ -0.34
TRA2B-208ENST00000465245 C2CD2Q9Y426 696 aa12.95□□□□□ -0.34
TRA2B-208ENST00000465245 MYOFQ9NZM1 2061 aa12.95□□□□□ -0.34
TRA2B-208ENST00000465245 SPAARA0A1B0GVQ0 90 aa12.94□□□□□ -0.34
TRA2B-208ENST00000465245 KPNA7A9QM74 516 aa12.94□□□□□ -0.34
TRA2B-208ENST00000465245 K7EQS6 105 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms