RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 PTPAQ15257 358 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 SF3A1Q15459 793 aaKnown RBP11.77□□□□□ -0.53
COL11A1-207ENST00000465209 NFE2Q16621 373 aaPredicted RBP11.77□□□□□ -0.53
COL11A1-207ENST00000465209 PLK5Q496M5 336 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 AASDHQ4L235 1098 aaPredicted RBP11.77□□□□□ -0.53
COL11A1-207ENST00000465209 INTS6LQ5JSJ4 861 aaKnown RBP11.77□□□□□ -0.53
COL11A1-207ENST00000465209 N4BP2L1Q5TBK1 243 aaPredicted RBP11.77□□□□□ -0.53
COL11A1-207ENST00000465209 LIMS2Q7Z4I7 341 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 CAMKK1Q8N5S9 505 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 DDX1Q92499 740 aaKnown RBP11.77□□□□□ -0.53
COL11A1-207ENST00000465209 EPSTI1Q96J88 318 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 HHIPQ96QV1 700 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 ACBD6Q9BR61 282 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 FGFBP2Q9BYJ0 223 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 DUSP15Q9H1R2 295 aaPredicted RBP11.77□□□□□ -0.53
COL11A1-207ENST00000465209 ZHX3Q9H4I2 956 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 GDAP2Q9NXN4 497 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 GCNT4Q9P109 453 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 SIX4Q9UIU6 781 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 THADAQ6YHU6 1953 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 MYOFQ9NZM1 2061 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 FRMD3A2A2Y4 597 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 MYMKA6NI61 221 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 GABRDO14764 452 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 ATG13O75143 517 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 PRPF40AO75400 957 aaKnown RBP11.76□□□□□ -0.53
COL11A1-207ENST00000465209 BMP15O95972 392 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 ITGB3P05106 788 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 KRT18P05783 430 aaKnown RBP11.76□□□□□ -0.53
COL11A1-207ENST00000465209 DRD1P21728 446 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 ACAT1P24752 427 aaKnown RBP11.76□□□□□ -0.53
COL11A1-207ENST00000465209 MPLP40238 635 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 PNPLA4P41247 253 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 ZXDBP98169 803 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 TSPY1Q01534 308 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 BFSP1Q12934 665 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 PDGFRLQ15198 375 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 DDR2Q16832 855 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 GAB4Q2WGN9 574 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 EML3Q32P44 896 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 CFAP221Q4G0U5 840 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 L1TD1Q5T7N2 865 aaKnown RBP11.76□□□□□ -0.53
COL11A1-207ENST00000465209 STPG1Q5TH74 334 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 TCEAL6Q6IPX3 200 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 SYT13Q7L8C5 426 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 DYMQ7RTS9 669 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 BRAPQ7Z569 592 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 LRRC52Q8N7C0 313 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 RPLP0P6Q8NHW5 317 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 SPATA18Q8TC71 538 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 OSCP1Q8WVF1 389 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 POMGNT1Q8WZA1 660 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 MRPS31Q92665 395 aaKnown RBP11.76□□□□□ -0.53
COL11A1-207ENST00000465209 TCEAL3Q969E4 200 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 SAAL1Q96ER3 474 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 P2RY13Q9BPV8 354 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 TMEM206Q9H813 350 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 ECT2Q9H8V3 914 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 DDX43Q9NXZ2 648 aaKnown RBP11.76□□□□□ -0.53
COL11A1-207ENST00000465209 SEL1LQ9UBV2 794 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 EBF1Q9UH73 591 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 MAGED2Q9UNF1 606 aaPredicted RBP11.76□□□□□ -0.53
COL11A1-207ENST00000465209 SLC8A2Q9UPR5 921 aa11.76□□□□□ -0.53
COL11A1-207ENST00000465209 FREM2Q5SZK8 3169 aa11.75□□□□□ -0.53
COL11A1-207ENST00000465209 C2orf78A6NCI8 922 aa11.75□□□□□ -0.53
COL11A1-207ENST00000465209 ANTXRLA6NF34 631 aa11.75□□□□□ -0.53
COL11A1-207ENST00000465209 CCDC192P0DO97 292 aa11.75□□□□□ -0.53
COL11A1-207ENST00000465209 POSTNQ15063 836 aa11.75□□□□□ -0.53
COL11A1-207ENST00000465209 TAF12Q16514 161 aa11.75□□□□□ -0.53
COL11A1-207ENST00000465209 FBXO43Q4G163 708 aa11.75□□□□□ -0.53
COL11A1-207ENST00000465209 IL31Q6EBC2 164 aa11.75□□□□□ -0.53
COL11A1-207ENST00000465209 FAM171BQ6P995 826 aa11.75□□□□□ -0.53
COL11A1-207ENST00000465209 TMEM86AQ8N2M4 240 aa11.75□□□□□ -0.53
COL11A1-207ENST00000465209 C12orf50Q8NA57 414 aaPredicted RBP11.75□□□□□ -0.53
COL11A1-207ENST00000465209 KBTBD7Q8WVZ9 684 aa11.75□□□□□ -0.53
COL11A1-207ENST00000465209 FUBP3Q96I24 572 aaKnown RBP eCLIP11.75□□□□□ -0.53
COL11A1-207ENST00000465209 CYP2S1Q96SQ9 504 aa11.75□□□□□ -0.53
COL11A1-207ENST00000465209 CBWD1Q9BRT8 395 aa11.75□□□□□ -0.53
COL11A1-207ENST00000465209 FAM213AQ9BRX8 229 aa11.75□□□□□ -0.53
COL11A1-207ENST00000465209 LSM14BQ9BX40 385 aaKnown RBP11.75□□□□□ -0.53
COL11A1-207ENST00000465209 OLFML3Q9NRN5 406 aa11.75□□□□□ -0.53
COL11A1-207ENST00000465209 UXTQ9UBK9 157 aaPredicted RBP11.75□□□□□ -0.53
COL11A1-207ENST00000465209 STK17AQ9UEE5 414 aa11.75□□□□□ -0.53
COL11A1-207ENST00000465209 FBXO2Q9UK22 296 aaPredicted RBP11.75□□□□□ -0.53
COL11A1-207ENST00000465209 GTF3C4Q9UKN8 822 aa11.75□□□□□ -0.53
COL11A1-207ENST00000465209 ANGPTL2Q9UKU9 493 aa11.75□□□□□ -0.53
COL11A1-207ENST00000465209 ITGA11Q9UKX5 1188 aa11.75□□□□□ -0.53
COL11A1-207ENST00000465209 AGAP1Q9UPQ3 857 aa11.75□□□□□ -0.53
COL11A1-207ENST00000465209 WNT6Q9Y6F9 365 aa11.75□□□□□ -0.53
COL11A1-207ENST00000465209 PTPRJQ12913 1337 aa11.75□□□□□ -0.53
COL11A1-207ENST00000465209 ASCC3Q8N3C0 2202 aaKnown RBP11.74□□□□□ -0.53
COL11A1-207ENST00000465209 DCLK1O15075 740 aa11.74□□□□□ -0.53
COL11A1-207ENST00000465209 KCNK5O95279 499 aa11.74□□□□□ -0.53
COL11A1-207ENST00000465209 GARTP22102 1010 aa11.74□□□□□ -0.53
COL11A1-207ENST00000465209 RPL10AP62906 217 aaKnown RBP11.74□□□□□ -0.53
COL11A1-207ENST00000465209 TFAMQ00059 246 aaKnown RBP11.74□□□□□ -0.53
COL11A1-207ENST00000465209 DMC1Q14565 340 aa11.74□□□□□ -0.53
COL11A1-207ENST00000465209 SOWAHAQ2M3V2 549 aa11.74□□□□□ -0.53
COL11A1-207ENST00000465209 CPA6Q8N4T0 437 aa11.74□□□□□ -0.53
COL11A1-207ENST00000465209 TOP6BLQ8N6T0 577 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms