RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 ARID3AQ99856 593 aa10.28□□□□□ -0.76
APP-213ENST00000464867 LRRC3Q9BY71 257 aa10.28□□□□□ -0.76
APP-213ENST00000464867 IL25Q9H293 177 aa10.28□□□□□ -0.76
APP-213ENST00000464867 FSCN3Q9NQT6 498 aa10.28□□□□□ -0.76
APP-213ENST00000464867 MYO16Q9Y6X6 1858 aa10.27□□□□□ -0.76
APP-213ENST00000464867 TEX15Q9BXT5 2789 aa10.27□□□□□ -0.76
APP-213ENST00000464867 PTPRQQ9UMZ3 2332 aa10.27□□□□□ -0.77
APP-213ENST00000464867 U2AF2P26368 475 aaKnown RBP eCLIP10.27□□□□□ -0.77
APP-213ENST00000464867 AVPR1AP37288 418 aa10.27□□□□□ -0.77
APP-213ENST00000464867 P2RY2P41231 377 aa10.27□□□□□ -0.77
APP-213ENST00000464867 GSK3AP49840 483 aa10.27□□□□□ -0.77
APP-213ENST00000464867 MRPL58Q14197 206 aaKnown RBP10.27□□□□□ -0.77
APP-213ENST00000464867 PDGFRLQ15198 375 aa10.27□□□□□ -0.77
APP-213ENST00000464867 TAF12Q16514 161 aa10.27□□□□□ -0.77
APP-213ENST00000464867 TAF1BQ53T94 588 aaPredicted RBP10.27□□□□□ -0.77
APP-213ENST00000464867 C2orf27AQ580R0 203 aa10.27□□□□□ -0.77
APP-213ENST00000464867 PEAR1Q5VY43 1037 aaPredicted RBP10.27□□□□□ -0.77
APP-213ENST00000464867 TRIM68Q6AZZ1 485 aa10.27□□□□□ -0.77
APP-213ENST00000464867 B4GALNT3Q6L9W6 998 aa10.27□□□□□ -0.77
APP-213ENST00000464867 APOA5Q6Q788 366 aa10.27□□□□□ -0.77
APP-213ENST00000464867 B3GNT9Q6UX72 402 aa10.27□□□□□ -0.77
APP-213ENST00000464867 APBB1IPQ7Z5R6 666 aaPredicted RBP10.27□□□□□ -0.77
APP-213ENST00000464867 DNAJB7Q7Z6W7 309 aaPredicted RBP10.27□□□□□ -0.77
APP-213ENST00000464867 GLRX5Q86SX6 157 aa10.27□□□□□ -0.77
APP-213ENST00000464867 NOSTRINQ8IVI9 506 aa10.27□□□□□ -0.77
APP-213ENST00000464867 ZBTB8OSQ8IWT0 167 aa10.27□□□□□ -0.77
APP-213ENST00000464867 C4orf19Q8IY42 314 aa10.27□□□□□ -0.77
APP-213ENST00000464867 PGBD3Q8N328 593 aa10.27□□□□□ -0.77
APP-213ENST00000464867 DAGLBQ8NCG7 672 aa10.27□□□□□ -0.77
APP-213ENST00000464867 CCDC148Q8NFR7 591 aa10.27□□□□□ -0.77
APP-213ENST00000464867 SETD7Q8WTS6 366 aaKnown RBP10.27□□□□□ -0.77
APP-213ENST00000464867 RLN3Q8WXF3 142 aa10.27□□□□□ -0.77
APP-213ENST00000464867 PNMA5Q96PV4 448 aa10.27□□□□□ -0.77
APP-213ENST00000464867 PPP1R10Q96QC0 940 aaKnown RBP10.27□□□□□ -0.77
APP-213ENST00000464867 FNBP1Q96RU3 617 aa10.27□□□□□ -0.77
APP-213ENST00000464867 LRRC2Q9BYS8 371 aa10.27□□□□□ -0.77
APP-213ENST00000464867 C22orf23Q9BZE7 217 aa10.27□□□□□ -0.77
APP-213ENST00000464867 CAPN10Q9HC96 672 aa10.27□□□□□ -0.77
APP-213ENST00000464867 HPS4Q9NQG7 708 aa10.27□□□□□ -0.77
APP-213ENST00000464867 SLC38A7Q9NVC3 462 aa10.27□□□□□ -0.77
APP-213ENST00000464867 KIAA1549LQ6ZVL6 1849 aa10.26□□□□□ -0.77
APP-213ENST00000464867 OTOL1A6NHN0 477 aaPredicted RBP10.26□□□□□ -0.77
APP-213ENST00000464867 LRRIQ4A6NIV6 560 aa10.26□□□□□ -0.77
APP-213ENST00000464867 E9PAM4 449 aa10.26□□□□□ -0.77
APP-213ENST00000464867 PODXLO00592 558 aa10.26□□□□□ -0.77
APP-213ENST00000464867 WISP1O95388 367 aa10.26□□□□□ -0.77
APP-213ENST00000464867 IGFBP6P24592 240 aaPredicted RBP10.26□□□□□ -0.77
APP-213ENST00000464867 ITPKBP27987 946 aa10.26□□□□□ -0.77
APP-213ENST00000464867 CDC25CP30307 473 aa10.26□□□□□ -0.77
APP-213ENST00000464867 GJA4P35212 333 aa10.26□□□□□ -0.77
APP-213ENST00000464867 YARSP54577 528 aaKnown RBP10.26□□□□□ -0.77
APP-213ENST00000464867 AKAP17AQ02040 695 aaKnown RBP10.26□□□□□ -0.77
APP-213ENST00000464867 SRSF1Q07955 248 aaKnown RBP eCLIP10.26□□□□□ -0.77
APP-213ENST00000464867 DUSP4Q13115 394 aa10.26□□□□□ -0.77
APP-213ENST00000464867 PRPF4BQ13523 1007 aaKnown RBP10.26□□□□□ -0.77
APP-213ENST00000464867 HDAC1Q13547 482 aaPredicted RBP10.26□□□□□ -0.77
APP-213ENST00000464867 CRY1Q16526 586 aa10.26□□□□□ -0.77
APP-213ENST00000464867 CD300LGQ6UXG3 332 aa10.26□□□□□ -0.77
APP-213ENST00000464867 GAREM2Q75VX8 874 aa10.26□□□□□ -0.77
APP-213ENST00000464867 SLCO6A1Q86UG4 719 aa10.26□□□□□ -0.77
APP-213ENST00000464867 FAM181AQ8N9Y4 354 aa10.26□□□□□ -0.77
APP-213ENST00000464867 C3orf58Q8NDZ4 430 aa10.26□□□□□ -0.77
APP-213ENST00000464867 OR2I1PQ8NGU4 316 aa10.26□□□□□ -0.77
APP-213ENST00000464867 OLIG1Q8TAK6 271 aa10.26□□□□□ -0.77
APP-213ENST00000464867 ASAP3Q8TDY4 903 aa10.26□□□□□ -0.77
APP-213ENST00000464867 PSMG2Q969U7 264 aa10.26□□□□□ -0.77
APP-213ENST00000464867 ZNF837Q96EG3 531 aaPredicted RBP10.26□□□□□ -0.77
APP-213ENST00000464867 PGLYRP2Q96PD5 576 aa10.26□□□□□ -0.77
APP-213ENST00000464867 LXNQ9BS40 222 aa10.26□□□□□ -0.77
APP-213ENST00000464867 PI4K2AQ9BTU6 479 aa10.26□□□□□ -0.77
APP-213ENST00000464867 POLR3CQ9BUI4 534 aaPredicted RBP10.26□□□□□ -0.77
APP-213ENST00000464867 OXCT2Q9BYC2 517 aaPredicted RBP10.26□□□□□ -0.77
APP-213ENST00000464867 SMG9Q9H0W8 520 aaKnown RBP10.26□□□□□ -0.77
APP-213ENST00000464867 CXCL16Q9H2A7 254 aa10.26□□□□□ -0.77
APP-213ENST00000464867 PDZD7Q9H5P4 517 aa10.26□□□□□ -0.77
APP-213ENST00000464867 ZSWIM4Q9H7M6 989 aa10.26□□□□□ -0.77
APP-213ENST00000464867 GOLGA2P5Q9HBQ8 144 aa10.26□□□□□ -0.77
APP-213ENST00000464867 TBX20Q9UMR3 447 aa10.26□□□□□ -0.77
APP-213ENST00000464867 PTPRDP23468 1912 aa10.26□□□□□ -0.77
APP-213ENST00000464867 KNTC1P50748 2209 aa10.26□□□□□ -0.77
APP-213ENST00000464867 MYO9AB2RTY4 2548 aa10.26□□□□□ -0.77
APP-213ENST00000464867 CCDC196A0A1B0GTZ2 297 aa10.25□□□□□ -0.77
APP-213ENST00000464867 GOLGA8AA7E2F4 631 aa10.25□□□□□ -0.77
APP-213ENST00000464867 GOLGA8BA8MQT2 603 aa10.25□□□□□ -0.77
APP-213ENST00000464867 EML1O00423 815 aa10.25□□□□□ -0.77
APP-213ENST00000464867 ADAMTS3O15072 1205 aa10.25□□□□□ -0.77
APP-213ENST00000464867 IL2RAP01589 272 aa10.25□□□□□ -0.77
APP-213ENST00000464867 HLA-EP13747 358 aa10.25□□□□□ -0.77
APP-213ENST00000464867 GLRA2P23416 452 aa10.25□□□□□ -0.77
APP-213ENST00000464867 MCM4P33991 863 aa10.25□□□□□ -0.77
APP-213ENST00000464867 ARL2P36404 184 aa10.25□□□□□ -0.77
APP-213ENST00000464867 SEC13P55735 322 aa10.25□□□□□ -0.77
APP-213ENST00000464867 RPL6Q02878 288 aaKnown RBP10.25□□□□□ -0.77
APP-213ENST00000464867 PPP2R5CQ13362 524 aa10.25□□□□□ -0.77
APP-213ENST00000464867 VEPH1Q14D04 833 aa10.25□□□□□ -0.77
APP-213ENST00000464867 DBN1Q16643 649 aa10.25□□□□□ -0.77
APP-213ENST00000464867 PLEKHG6Q3KR16 790 aa10.25□□□□□ -0.77
APP-213ENST00000464867 DCAF4L1Q3SXM0 396 aa10.25□□□□□ -0.77
APP-213ENST00000464867 SLC36A4Q6YBV0 504 aa10.25□□□□□ -0.77
APP-213ENST00000464867 CHD1LQ86WJ1 897 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms