RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 LRRC3BQ96PB8 259 aa27.69■■■□□ 2.02
U2AF1-206ENST00000464750 FAM186AA6NE01 2351 aa27.68■■■□□ 2.02
U2AF1-206ENST00000464750 RIF1Q5UIP0 2472 aaKnown RBP27.68■■■□□ 2.02
U2AF1-206ENST00000464750 ATP2C2O75185 946 aa27.68■■■□□ 2.02
U2AF1-206ENST00000464750 F11P03951 625 aa27.68■■■□□ 2.02
U2AF1-206ENST00000464750 RPN1P04843 607 aaKnown RBP27.68■■■□□ 2.02
U2AF1-206ENST00000464750 PRR29P0C7W0 189 aa27.68■■■□□ 2.02
U2AF1-206ENST00000464750 SP9P0CG40 484 aa27.68■■■□□ 2.02
U2AF1-206ENST00000464750 LMO2P25791 158 aa27.68■■■□□ 2.02
U2AF1-206ENST00000464750 CASP4P49662 377 aa27.68■■■□□ 2.02
U2AF1-206ENST00000464750 TRPC3Q13507 836 aa27.68■■■□□ 2.02
U2AF1-206ENST00000464750 C4orf50Q6ZRC1 276 aa27.68■■■□□ 2.02
U2AF1-206ENST00000464750 FSIP1Q8NA03 581 aa27.68■■■□□ 2.02
U2AF1-206ENST00000464750 PLEKHO2Q8TD55 490 aa27.68■■■□□ 2.02
U2AF1-206ENST00000464750 FAM3CQ92520 227 aa27.68■■■□□ 2.02
U2AF1-206ENST00000464750 MYLPFQ96A32 169 aa27.68■■■□□ 2.02
U2AF1-206ENST00000464750 SLC46A2Q9BY10 475 aa27.68■■■□□ 2.02
U2AF1-206ENST00000464750 SMG9Q9H0W8 520 aaKnown RBP27.68■■■□□ 2.02
U2AF1-206ENST00000464750 ZMYM5Q9UJ78 669 aa27.68■■■□□ 2.02
U2AF1-206ENST00000464750 SLC38A8A6NNN8 435 aa27.67■■■□□ 2.02
U2AF1-206ENST00000464750 LAMTOR5O43504 91 aa27.67■■■□□ 2.02
U2AF1-206ENST00000464750 NOL4O94818 638 aa27.67■■■□□ 2.02
U2AF1-206ENST00000464750 RPS9P46781 194 aaKnown RBP27.67■■■□□ 2.02
U2AF1-206ENST00000464750 TNNC1P63316 161 aa27.67■■■□□ 2.02
U2AF1-206ENST00000464750 ARHGAP29Q52LW3 1261 aa27.67■■■□□ 2.02
U2AF1-206ENST00000464750 SCN4BQ8IWT1 228 aa27.67■■■□□ 2.02
U2AF1-206ENST00000464750 MAML2Q8IZL2 1156 aaPredicted RBP27.67■■■□□ 2.02
U2AF1-206ENST00000464750 BPIFB1Q8TDL5 484 aa27.67■■■□□ 2.02
U2AF1-206ENST00000464750 ZFYVE19Q96K21 471 aa27.67■■■□□ 2.02
U2AF1-206ENST00000464750 MRPL45Q9BRJ2 306 aaKnown RBP27.67■■■□□ 2.02
U2AF1-206ENST00000464750 KCTD10Q9H3F6 313 aa27.67■■■□□ 2.02
U2AF1-206ENST00000464750 CRTAC1Q9NQ79 661 aa27.67■■■□□ 2.02
U2AF1-206ENST00000464750 R4GN57 208 aa27.67■■■□□ 2.02
U2AF1-206ENST00000464750 ANAPC1Q9H1A4 1944 aa27.67■■■□□ 2.02
U2AF1-206ENST00000464750 A0A1W2PQ27 194 aa27.66■■■□□ 2.02
U2AF1-206ENST00000464750 A0A1W2PQ64 194 aa27.66■■■□□ 2.02
U2AF1-206ENST00000464750 A0A1W2PQD8 194 aa27.66■■■□□ 2.02
U2AF1-206ENST00000464750 PDGFRBP09619 1106 aa27.66■■■□□ 2.02
U2AF1-206ENST00000464750 DDX6P26196 483 aaKnown RBP eCLIP27.66■■■□□ 2.02
U2AF1-206ENST00000464750 MAGEA11P43364 429 aa27.66■■■□□ 2.02
U2AF1-206ENST00000464750 MYL6P60660 151 aa27.66■■■□□ 2.02
U2AF1-206ENST00000464750 FZD5Q13467 585 aa27.66■■■□□ 2.02
U2AF1-206ENST00000464750 MAPRE1Q15691 268 aaKnown RBP27.66■■■□□ 2.02
U2AF1-206ENST00000464750 WDR72Q3MJ13 1102 aa27.66■■■□□ 2.02
U2AF1-206ENST00000464750 SLC9A9Q8IVB4 645 aa27.66■■■□□ 2.02
U2AF1-206ENST00000464750 CMTM8Q8IZV2 173 aa27.66■■■□□ 2.02
U2AF1-206ENST00000464750 ZNF687Q8N1G0 1237 aa27.66■■■□□ 2.02
U2AF1-206ENST00000464750 MAB21L3Q8N8X9 362 aa27.66■■■□□ 2.02
U2AF1-206ENST00000464750 MRPS31Q92665 395 aaKnown RBP27.66■■■□□ 2.02
U2AF1-206ENST00000464750 SNX25Q9H3E2 840 aa27.66■■■□□ 2.02
U2AF1-206ENST00000464750 GOLPH3LQ9H4A5 285 aa27.66■■■□□ 2.02
U2AF1-206ENST00000464750 DMAC2Q9NW81 257 aa27.66■■■□□ 2.02
U2AF1-206ENST00000464750 UXTQ9UBK9 157 aaPredicted RBP27.66■■■□□ 2.02
U2AF1-206ENST00000464750 LRRIQ3A6PVS8 624 aaPredicted RBP27.65■■■□□ 2.02
U2AF1-206ENST00000464750 PHACTR2O75167 634 aa27.65■■■□□ 2.02
U2AF1-206ENST00000464750 TACC1O75410 805 aa27.65■■■□□ 2.02
U2AF1-206ENST00000464750 TADA3O75528 432 aa27.65■■■□□ 2.02
U2AF1-206ENST00000464750 STAU1O95793 577 aaKnown RBP27.65■■■□□ 2.02
U2AF1-206ENST00000464750 AVPR1AP37288 418 aa27.65■■■□□ 2.02
U2AF1-206ENST00000464750 KPNA1P52294 538 aaPredicted RBP27.65■■■□□ 2.02
U2AF1-206ENST00000464750 BIRC3Q13489 604 aa27.65■■■□□ 2.02
U2AF1-206ENST00000464750 CELF5Q8N6W0 485 aaKnown RBP27.65■■■□□ 2.02
U2AF1-206ENST00000464750 CCDC47Q96A33 483 aaKnown RBP27.65■■■□□ 2.02
U2AF1-206ENST00000464750 TRMT2BQ96GJ1 504 aaKnown RBP27.65■■■□□ 2.02
U2AF1-206ENST00000464750 MSANTD3Q96H12 275 aa27.65■■■□□ 2.02
U2AF1-206ENST00000464750 GDPD2Q9HCC8 539 aa27.65■■■□□ 2.02
U2AF1-206ENST00000464750 MAGEC2Q9UBF1 373 aaPredicted RBP27.65■■■□□ 2.02
U2AF1-206ENST00000464750 NME7Q9Y5B8 376 aa27.65■■■□□ 2.02
U2AF1-206ENST00000464750 PTPRZ1P23471 2315 aaPredicted RBP27.64■■■□□ 2.02
U2AF1-206ENST00000464750 PDXKO00764 312 aa27.64■■■□□ 2.02
U2AF1-206ENST00000464750 NR3C1P04150 777 aa27.64■■■□□ 2.02
U2AF1-206ENST00000464750 CCNE1P24864 410 aa27.64■■■□□ 2.02
U2AF1-206ENST00000464750 SOX9P48436 509 aa27.64■■■□□ 2.02
U2AF1-206ENST00000464750 MLLT6P55198 1093 aaPredicted RBP27.64■■■□□ 2.02
U2AF1-206ENST00000464750 CYP27A1Q02318 531 aa27.64■■■□□ 2.02
U2AF1-206ENST00000464750 TDRD10Q5VZ19 366 aaKnown RBP27.64■■■□□ 2.02
U2AF1-206ENST00000464750 TXNDC8Q6A555 127 aa27.64■■■□□ 2.02
U2AF1-206ENST00000464750 ZC3H14Q6PJT7 736 aaKnown RBP27.64■■■□□ 2.02
U2AF1-206ENST00000464750 KRBA2Q6ZNG9 492 aa27.64■■■□□ 2.02
U2AF1-206ENST00000464750 OR6B3Q8NGW1 331 aa27.64■■■□□ 2.02
U2AF1-206ENST00000464750 PARD3BQ8TEW8 1205 aa27.64■■■□□ 2.02
U2AF1-206ENST00000464750 SYAP1Q96A49 352 aaPredicted RBP27.64■■■□□ 2.02
U2AF1-206ENST00000464750 MYRFLQ96LU7 910 aa27.64■■■□□ 2.02
U2AF1-206ENST00000464750 XYLT2Q9H1B5 865 aa27.64■■■□□ 2.02
U2AF1-206ENST00000464750 NXF1Q9UBU9 619 aaKnown RBP27.64■■■□□ 2.02
U2AF1-206ENST00000464750 FBXO4Q9UKT5 387 aa27.64■■■□□ 2.02
U2AF1-206ENST00000464750 CLSTN1O94985 981 aa27.63■■■□□ 2.01
U2AF1-206ENST00000464750 BDNFP23560 247 aa27.63■■■□□ 2.01
U2AF1-206ENST00000464750 ATICP31939 592 aa27.63■■■□□ 2.01
U2AF1-206ENST00000464750 GNL1P36915 607 aaPredicted RBP27.63■■■□□ 2.01
U2AF1-206ENST00000464750 AP3M2P53677 418 aa27.63■■■□□ 2.01
U2AF1-206ENST00000464750 PLCB2Q00722 1185 aa27.63■■■□□ 2.01
U2AF1-206ENST00000464750 DPYDQ12882 1025 aa27.63■■■□□ 2.01
U2AF1-206ENST00000464750 BECN1Q14457 450 aa27.63■■■□□ 2.01
U2AF1-206ENST00000464750 MDH1BQ5I0G3 518 aa27.63■■■□□ 2.01
U2AF1-206ENST00000464750 VSTM1Q6UX27 236 aa27.63■■■□□ 2.01
U2AF1-206ENST00000464750 TMEM174Q8WUU8 243 aa27.63■■■□□ 2.01
U2AF1-206ENST00000464750 PCED1BQ96HM7 432 aa27.63■■■□□ 2.01
U2AF1-206ENST00000464750 C8orf33Q9H7E9 229 aaPredicted RBP27.63■■■□□ 2.01
U2AF1-206ENST00000464750 GTSE1Q9NYZ3 720 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms