RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 TBC1D17Q9HA65 648 aa17.34■□□□□ 0.37
COL1A1-202ENST00000463440 IL21Q9HBE4 155 aa17.34■□□□□ 0.37
COL1A1-202ENST00000463440 CRTAC1Q9NQ79 661 aa17.34■□□□□ 0.37
COL1A1-202ENST00000463440 UXTQ9UBK9 157 aaPredicted RBP17.34■□□□□ 0.37
COL1A1-202ENST00000463440 ZMYM5Q9UJ78 669 aa17.34■□□□□ 0.37
COL1A1-202ENST00000463440 MAGED2Q9UNF1 606 aaPredicted RBP17.34■□□□□ 0.37
COL1A1-202ENST00000463440 A8MXQ7 604 aa17.33■□□□□ 0.36
COL1A1-202ENST00000463440 GADD45BO75293 160 aaPredicted RBP17.33■□□□□ 0.36
COL1A1-202ENST00000463440 EPB41P11171 864 aaKnown RBP17.33■□□□□ 0.36
COL1A1-202ENST00000463440 HMGA1P17096 107 aaKnown RBP17.33■□□□□ 0.36
COL1A1-202ENST00000463440 PSMC3P17980 439 aa17.33■□□□□ 0.36
COL1A1-202ENST00000463440 PTPN1P18031 435 aaKnown RBP17.33■□□□□ 0.36
COL1A1-202ENST00000463440 VIPR2P41587 438 aa17.33■□□□□ 0.36
COL1A1-202ENST00000463440 PIK3CAP42336 1068 aa17.33■□□□□ 0.36
COL1A1-202ENST00000463440 PTPN5P54829 565 aa17.33■□□□□ 0.36
COL1A1-202ENST00000463440 PRKCQQ04759 706 aa17.33■□□□□ 0.36
COL1A1-202ENST00000463440 STIM1Q13586 685 aa17.33■□□□□ 0.36
COL1A1-202ENST00000463440 GRM2Q14416 872 aa17.33■□□□□ 0.36
COL1A1-202ENST00000463440 SLC44A4Q53GD3 710 aa17.33■□□□□ 0.36
COL1A1-202ENST00000463440 MDH1BQ5I0G3 518 aa17.33■□□□□ 0.36
COL1A1-202ENST00000463440 C1orf220Q5T0J3 134 aa17.33■□□□□ 0.36
COL1A1-202ENST00000463440 STXBP5Q5T5C0 1151 aa17.33■□□□□ 0.36
COL1A1-202ENST00000463440 SDHAF4Q5VUM1 108 aa17.33■□□□□ 0.36
COL1A1-202ENST00000463440 VSTM1Q6UX27 236 aa17.33■□□□□ 0.36
COL1A1-202ENST00000463440 IMPG2Q9BZV3 1241 aa17.33■□□□□ 0.36
COL1A1-202ENST00000463440 TASP1Q9H6P5 420 aa17.33■□□□□ 0.36
COL1A1-202ENST00000463440 SMYD3Q9H7B4 428 aa17.33■□□□□ 0.36
COL1A1-202ENST00000463440 BRD9Q9H8M2 597 aa17.33■□□□□ 0.36
COL1A1-202ENST00000463440 MUC6Q6W4X9 2439 aa17.33■□□□□ 0.36
COL1A1-202ENST00000463440 SLC38A8A6NNN8 435 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 HEPACAM2A8MVW5 462 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 DPYSL4O14531 572 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 HLA-DRAP01903 254 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 TRIM49P0CI25 452 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 TRIM49CP0CI26 452 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 BDNFP23560 247 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 ANXA13P27216 316 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 GRIK1P39086 918 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 PPP1R2P41236 205 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 GCLMP48507 274 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 NLRP12P59046 1061 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 STARD6P59095 220 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 CYP4F8P98187 520 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 MLF2Q15773 248 aaPredicted RBP17.32■□□□□ 0.36
COL1A1-202ENST00000463440 VITQ6UXI7 678 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 SCARA5Q6ZMJ2 495 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 ARID3BQ8IVW6 561 aaPredicted RBP17.32■□□□□ 0.36
COL1A1-202ENST00000463440 MFSD6LQ8IWD5 586 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 YAF2Q8IY57 180 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 ADSSL1Q8N142 457 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 PRSS33Q8NF86 280 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 DNASE1L2Q92874 299 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 IRF7Q92985 503 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 TRMT2BQ96GJ1 504 aaKnown RBP17.32■□□□□ 0.36
COL1A1-202ENST00000463440 PCED1BQ96HM7 432 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 CEP295NLQ96MC4 621 aa17.32■□□□□ 0.36
COL1A1-202ENST00000463440 PSMA7O14818 248 aa17.31■□□□□ 0.36
COL1A1-202ENST00000463440 TRIM66O15016 1216 aa17.31■□□□□ 0.36
COL1A1-202ENST00000463440 GALR2O43603 387 aaPredicted RBP17.31■□□□□ 0.36
COL1A1-202ENST00000463440 PI15O43692 258 aa17.31■□□□□ 0.36
COL1A1-202ENST00000463440 STX10O60499 249 aa17.31■□□□□ 0.36
COL1A1-202ENST00000463440 NOL4O94818 638 aa17.31■□□□□ 0.36
COL1A1-202ENST00000463440 ASS1P00966 412 aaKnown RBP17.31■□□□□ 0.36
COL1A1-202ENST00000463440 F11P03951 625 aa17.31■□□□□ 0.36
COL1A1-202ENST00000463440 DDX6P26196 483 aaKnown RBP eCLIP17.31■□□□□ 0.36
COL1A1-202ENST00000463440 WEE1P30291 646 aa17.31■□□□□ 0.36
COL1A1-202ENST00000463440 GDI1P31150 447 aa17.31■□□□□ 0.36
COL1A1-202ENST00000463440 GTF2H1P32780 548 aa17.31■□□□□ 0.36
COL1A1-202ENST00000463440 CDH8P55286 799 aa17.31■□□□□ 0.36
COL1A1-202ENST00000463440 FKBP3Q00688 224 aaKnown RBP17.31■□□□□ 0.36
COL1A1-202ENST00000463440 LRRC63Q05C16 580 aa17.31■□□□□ 0.36
COL1A1-202ENST00000463440 B3GALNT2Q8NCR0 500 aa17.31■□□□□ 0.36
COL1A1-202ENST00000463440 CCDC150Q8NCX0 1101 aa17.31■□□□□ 0.36
COL1A1-202ENST00000463440 STKLD1Q8NE28 680 aa17.31■□□□□ 0.36
COL1A1-202ENST00000463440 MRPS31Q92665 395 aaKnown RBP17.31■□□□□ 0.36
COL1A1-202ENST00000463440 TNIP3Q96KP6 325 aa17.31■□□□□ 0.36
COL1A1-202ENST00000463440 IRF2BPLQ9H1B7 796 aa17.31■□□□□ 0.36
COL1A1-202ENST00000463440 DPEP3Q9H4B8 488 aa17.31■□□□□ 0.36
COL1A1-202ENST00000463440 MMRN2Q9H8L6 949 aa17.31■□□□□ 0.36
COL1A1-202ENST00000463440 TMEM8AQ9HCN3 771 aa17.31■□□□□ 0.36
COL1A1-202ENST00000463440 OBP2AQ9NY56 170 aa17.31■□□□□ 0.36
COL1A1-202ENST00000463440 MAN1B1Q9UKM7 699 aa17.31■□□□□ 0.36
COL1A1-202ENST00000463440 NME7Q9Y5B8 376 aa17.31■□□□□ 0.36
COL1A1-202ENST00000463440 SOBPA7XYQ1 873 aa17.3■□□□□ 0.36
COL1A1-202ENST00000463440 ZNF263O14978 683 aa17.3■□□□□ 0.36
COL1A1-202ENST00000463440 SLC16A3O15427 465 aaKnown RBP17.3■□□□□ 0.36
COL1A1-202ENST00000463440 RAP1GAPP47736 663 aa17.3■□□□□ 0.36
COL1A1-202ENST00000463440 MCCD1P59942 119 aaPredicted RBP17.3■□□□□ 0.36
COL1A1-202ENST00000463440 UBE2HP62256 183 aa17.3■□□□□ 0.36
COL1A1-202ENST00000463440 PPP3CAQ08209 521 aa17.3■□□□□ 0.36
COL1A1-202ENST00000463440 ANKRD40Q6AI12 368 aa17.3■□□□□ 0.36
COL1A1-202ENST00000463440 ISM2Q6H9L7 571 aa17.3■□□□□ 0.36
COL1A1-202ENST00000463440 TMEM150AQ86TG1 271 aa17.3■□□□□ 0.36
COL1A1-202ENST00000463440 ELMO3Q96BJ8 720 aa17.3■□□□□ 0.36
COL1A1-202ENST00000463440 EEF2KMTQ96G04 330 aa17.3■□□□□ 0.36
COL1A1-202ENST00000463440 DHTKD1Q96HY7 919 aaPredicted RBP17.3■□□□□ 0.36
COL1A1-202ENST00000463440 SPATA17Q96L03 361 aa17.3■□□□□ 0.36
COL1A1-202ENST00000463440 MYRFLQ96LU7 910 aa17.3■□□□□ 0.36
COL1A1-202ENST00000463440 ELOVL4Q9GZR5 314 aa17.3■□□□□ 0.36
COL1A1-202ENST00000463440 EHD2Q9NZN4 543 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms