RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 MAGOHBQ96A72 148 aaKnown RBP15.29■□□□□ 0.04
HDAC6-213ENST00000462730 CPXM1Q96SM3 734 aa15.29■□□□□ 0.04
HDAC6-213ENST00000462730 TRIM51Q9BSJ1 452 aa15.29■□□□□ 0.04
HDAC6-213ENST00000462730 RASSF4Q9H2L5 321 aa15.29■□□□□ 0.04
HDAC6-213ENST00000462730 SYNCQ9H7C4 482 aa15.29■□□□□ 0.04
HDAC6-213ENST00000462730 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.29■□□□□ 0.04
HDAC6-213ENST00000462730 RRP15Q9Y3B9 282 aaKnown RBP15.29■□□□□ 0.04
HDAC6-213ENST00000462730 ERBB2P04626 1255 aa15.29■□□□□ 0.04
HDAC6-213ENST00000462730 OGDHQ02218 1023 aa15.29■□□□□ 0.04
HDAC6-213ENST00000462730 ZNF252P-AS1Q0IIN9 211 aa15.29■□□□□ 0.04
HDAC6-213ENST00000462730 NNTQ13423 1086 aa15.29■□□□□ 0.04
HDAC6-213ENST00000462730 CUL1Q13616 776 aa15.29■□□□□ 0.04
HDAC6-213ENST00000462730 LLGL1Q15334 1064 aa15.29■□□□□ 0.04
HDAC6-213ENST00000462730 FAM26DQ5JW98 314 aa15.29■□□□□ 0.04
HDAC6-213ENST00000462730 UBA3Q8TBC4 463 aa15.29■□□□□ 0.04
HDAC6-213ENST00000462730 C18orf8Q96DM3 657 aa15.29■□□□□ 0.04
HDAC6-213ENST00000462730 ZFP42Q96MM3 310 aa15.29■□□□□ 0.04
HDAC6-213ENST00000462730 ZNF560Q96MR9 790 aa15.29■□□□□ 0.04
HDAC6-213ENST00000462730 TSPAN18Q96SJ8 248 aa15.29■□□□□ 0.04
HDAC6-213ENST00000462730 GOLGA2P5Q9HBQ8 144 aa15.29■□□□□ 0.04
HDAC6-213ENST00000462730 PAK6Q9NQU5 681 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-213ENST00000462730 KIAA1257Q9ULG3 409 aa15.29■□□□□ 0.04
HDAC6-213ENST00000462730 PTGESO14684 152 aa15.28■□□□□ 0.04
HDAC6-213ENST00000462730 MGEA5O60502 916 aa15.28■□□□□ 0.04
HDAC6-213ENST00000462730 CAND2O75155 1236 aa15.28■□□□□ 0.04
HDAC6-213ENST00000462730 FAM153BP0C7A2 387 aa15.28■□□□□ 0.04
HDAC6-213ENST00000462730 RARAP10276 462 aa15.28■□□□□ 0.04
HDAC6-213ENST00000462730 CKBP12277 381 aa15.28■□□□□ 0.04
HDAC6-213ENST00000462730 CHRNA3P32297 505 aa15.28■□□□□ 0.04
HDAC6-213ENST00000462730 SOX4Q06945 474 aaPredicted RBP15.28■□□□□ 0.04
HDAC6-213ENST00000462730 DHX34Q14147 1143 aaKnown RBP15.28■□□□□ 0.04
HDAC6-213ENST00000462730 HLTFQ14527 1009 aaKnown RBP eCLIP15.28■□□□□ 0.04
HDAC6-213ENST00000462730 MTFR1Q15390 333 aa15.28■□□□□ 0.04
HDAC6-213ENST00000462730 SIX1Q15475 284 aaPredicted RBP15.28■□□□□ 0.04
HDAC6-213ENST00000462730 GOLGA7BQ2TAP0 167 aa15.28■□□□□ 0.04
HDAC6-213ENST00000462730 FAM153CQ494X1 144 aa15.28■□□□□ 0.04
HDAC6-213ENST00000462730 DDX42Q86XP3 938 aaKnown RBP eCLIP15.28■□□□□ 0.04
HDAC6-213ENST00000462730 XYLT1Q86Y38 959 aa15.28■□□□□ 0.04
HDAC6-213ENST00000462730 KATNAL2Q8IYT4 538 aa15.28■□□□□ 0.04
HDAC6-213ENST00000462730 FAM153AQ9UHL3 310 aa15.28■□□□□ 0.04
HDAC6-213ENST00000462730 UTP11Q9Y3A2 253 aaKnown RBP15.28■□□□□ 0.04
HDAC6-213ENST00000462730 FAM187AA6NFU0 413 aa15.27■□□□□ 0.04
HDAC6-213ENST00000462730 ARVCFO00192 962 aa15.27■□□□□ 0.04
HDAC6-213ENST00000462730 DNM1LO00429 736 aa15.27■□□□□ 0.04
HDAC6-213ENST00000462730 PIRO00625 290 aa15.27■□□□□ 0.04
HDAC6-213ENST00000462730 FSCN2O14926 492 aa15.27■□□□□ 0.04
HDAC6-213ENST00000462730 MLH1P40692 756 aa15.27■□□□□ 0.04
HDAC6-213ENST00000462730 GPD2P43304 727 aa15.27■□□□□ 0.04
HDAC6-213ENST00000462730 PDCLQ13371 301 aa15.27■□□□□ 0.04
HDAC6-213ENST00000462730 TTC27Q6P3X3 843 aa15.27■□□□□ 0.04
HDAC6-213ENST00000462730 LCLAT1Q6UWP7 414 aa15.27■□□□□ 0.04
HDAC6-213ENST00000462730 ACOT1Q86TX2 421 aa15.27■□□□□ 0.04
HDAC6-213ENST00000462730 CCDC50Q8IVM0 306 aa15.27■□□□□ 0.04
HDAC6-213ENST00000462730 HACE1Q8IYU2 909 aa15.27■□□□□ 0.04
HDAC6-213ENST00000462730 LPPQ93052 612 aa15.27■□□□□ 0.04
HDAC6-213ENST00000462730 DEFB118Q96PH6 123 aa15.27■□□□□ 0.04
HDAC6-213ENST00000462730 DPH5Q9H2P9 285 aa15.27■□□□□ 0.04
HDAC6-213ENST00000462730 WDR35Q9P2L0 1181 aa15.27■□□□□ 0.04
HDAC6-213ENST00000462730 TSPAN16Q9UKR8 245 aa15.27■□□□□ 0.04
HDAC6-213ENST00000462730 SIGLEC16A6NMB1 481 aa15.27■□□□□ 0.03
HDAC6-213ENST00000462730 VGLL3A8MV65 326 aa15.27■□□□□ 0.03
HDAC6-213ENST00000462730 F8VP50 259 aa15.27■□□□□ 0.03
HDAC6-213ENST00000462730 TRIM66O15016 1216 aa15.27■□□□□ 0.03
HDAC6-213ENST00000462730 DAPK3O43293 454 aa15.27■□□□□ 0.03
HDAC6-213ENST00000462730 GSCP56915 257 aaPredicted RBP15.27■□□□□ 0.03
HDAC6-213ENST00000462730 PIGHQ14442 188 aaPredicted RBP15.27■□□□□ 0.03
HDAC6-213ENST00000462730 STILQ15468 1287 aa15.27■□□□□ 0.03
HDAC6-213ENST00000462730 CYP1B1Q16678 543 aa15.27■□□□□ 0.03
HDAC6-213ENST00000462730 FOXR1Q6PIV2 292 aa15.27■□□□□ 0.03
HDAC6-213ENST00000462730 LRRC31Q6UY01 552 aa15.27■□□□□ 0.03
HDAC6-213ENST00000462730 JAMLQ86YT9 394 aa15.27■□□□□ 0.03
HDAC6-213ENST00000462730 C10orf67Q8IYJ2 551 aa15.27■□□□□ 0.03
HDAC6-213ENST00000462730 C12orf29Q8N999 325 aa15.27■□□□□ 0.03
HDAC6-213ENST00000462730 EIF1ADQ8N9N8 165 aaKnown RBP15.27■□□□□ 0.03
HDAC6-213ENST00000462730 OR6B3Q8NGW1 331 aa15.27■□□□□ 0.03
HDAC6-213ENST00000462730 JOSD2Q8TAC2 188 aa15.27■□□□□ 0.03
HDAC6-213ENST00000462730 RAB17Q9H0T7 212 aa15.27■□□□□ 0.03
HDAC6-213ENST00000462730 METTL5Q9NRN9 209 aaKnown RBP15.27■□□□□ 0.03
HDAC6-213ENST00000462730 RASAL2Q9UJF2 1139 aa15.27■□□□□ 0.03
HDAC6-213ENST00000462730 NME7Q9Y5B8 376 aa15.27■□□□□ 0.03
HDAC6-213ENST00000462730 SPTLC1O15269 473 aa15.26■□□□□ 0.03
HDAC6-213ENST00000462730 KRT3P12035 628 aa15.26■□□□□ 0.03
HDAC6-213ENST00000462730 TCF4P15884 667 aa15.26■□□□□ 0.03
HDAC6-213ENST00000462730 PSMA2P25787 234 aa15.26■□□□□ 0.03
HDAC6-213ENST00000462730 ECHS1P30084 290 aa15.26■□□□□ 0.03
HDAC6-213ENST00000462730 COILP38432 576 aaPredicted RBP15.26■□□□□ 0.03
HDAC6-213ENST00000462730 PNPLA4P41247 253 aa15.26■□□□□ 0.03
HDAC6-213ENST00000462730 PTGIRP43119 386 aa15.26■□□□□ 0.03
HDAC6-213ENST00000462730 ZNF268Q14587 947 aaPredicted RBP15.26■□□□□ 0.03
HDAC6-213ENST00000462730 SOWAHAQ2M3V2 549 aa15.26■□□□□ 0.03
HDAC6-213ENST00000462730 CCDC137Q6PK04 289 aaKnown RBP15.26■□□□□ 0.03
HDAC6-213ENST00000462730 TRAF7Q6Q0C0 670 aa15.26■□□□□ 0.03
HDAC6-213ENST00000462730 C12orf50Q8NA57 414 aaPredicted RBP15.26■□□□□ 0.03
HDAC6-213ENST00000462730 TSEN2Q8NCE0 465 aaKnown RBP15.26■□□□□ 0.03
HDAC6-213ENST00000462730 MAIP1Q8WWC4 291 aa15.26■□□□□ 0.03
HDAC6-213ENST00000462730 PPP1R10Q96QC0 940 aaKnown RBP15.26■□□□□ 0.03
HDAC6-213ENST00000462730 HERPUD2Q9BSE4 406 aa15.26■□□□□ 0.03
HDAC6-213ENST00000462730 TRIM31Q9BZY9 425 aa15.26■□□□□ 0.03
HDAC6-213ENST00000462730 FAM114A2Q9NRY5 505 aa15.26■□□□□ 0.03
HDAC6-213ENST00000462730 FAM49BQ9NUQ9 324 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms