RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 TLR5O60602 858 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 NBNO60934 754 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 KIF20AO95235 890 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 CSTBP04080 98 aaKnown RBP3.61□□□□□ -1.83
HDAC6-212ENST00000461608 A1BGP04217 495 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 HSD3B1P14060 373 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 KCNA2P16389 499 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 TPH1P17752 444 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 HK1P19367 917 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 FDXRP22570 491 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 PPIFP30405 207 aaKnown RBP3.61□□□□□ -1.83
HDAC6-212ENST00000461608 SLC5A2P31639 672 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 MCM7P33993 719 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 PPM1FP49593 454 aaPredicted RBP3.61□□□□□ -1.83
HDAC6-212ENST00000461608 CPT1AP50416 773 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 POLE2P56282 527 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 POU5F1BQ06416 359 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 CRHR2Q13324 411 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 BIRC3Q13489 604 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 TRIM14Q14142 442 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 HLXQ14774 488 aaPredicted RBP3.61□□□□□ -1.83
HDAC6-212ENST00000461608 ZACNQ401N2 412 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 NOMO2Q5JPE7 1267 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 FAM102AQ5T9C2 384 aaPredicted RBP3.61□□□□□ -1.83
HDAC6-212ENST00000461608 MRNIPQ6NTE8 343 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 MAMDC4Q6UXC1 1216 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 UNC13DQ70J99 1090 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 CLNKQ7Z7G1 428 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 GATAD2AQ86YP4 633 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 PSD4Q8NDX1 1056 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 OR56A3Q8NH54 315 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 POC1BQ8TC44 478 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 TRAPPC12Q8WVT3 735 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 RMDN3Q96TC7 470 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 MNTQ99583 582 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 MESP1Q9BRJ9 268 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 ETAA1Q9NY74 926 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 MID2Q9UJV3 735 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 SLC39A10Q9ULF5 831 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 SLC45A2Q9UMX9 530 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 RAD54BQ9Y620 910 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 SPATA31A3Q5VYP0 1347 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 A0A1B0GTW7 788 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 A0A1W2PS29 197 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 KRTAP23-1A1A580 65 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 TOR1BO14657 336 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 KCNQ3O43525 872 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 FOXS1O43638 330 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 ERN1O75460 977 aaKnown RBP3.6□□□□□ -1.83
HDAC6-212ENST00000461608 GPANK1O95872 356 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 EGR1P18146 543 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 SLC6A2P23975 617 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 CHKAP35790 457 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 PXNP49023 591 aaPredicted RBP3.6□□□□□ -1.83
HDAC6-212ENST00000461608 ANXA11P50995 505 aaKnown RBP3.6□□□□□ -1.83
HDAC6-212ENST00000461608 NHLH2Q02577 135 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 KRT17Q04695 432 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 CNGB1Q14028 1251 aaPredicted RBP3.6□□□□□ -1.83
HDAC6-212ENST00000461608 ELF2Q15723 593 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 PREPLQ4J6C6 727 aaPredicted RBP3.6□□□□□ -1.83
HDAC6-212ENST00000461608 C1QL3Q5VWW1 255 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 RINLQ6ZS11 566 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 GDF7Q7Z4P5 450 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 OR56A1Q8NGH5 318 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 FAM71BQ8TC56 605 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 PNISRQ8TF01 805 aaKnown RBP3.6□□□□□ -1.83
HDAC6-212ENST00000461608 MUL1Q969V5 352 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 CHFRQ96EP1 664 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 SLC46A1Q96NT5 459 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 OSBPL9Q96SU4 736 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 NELL2Q99435 816 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 TMEM120AQ9BXJ8 343 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 TLR10Q9BXR5 811 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 SLC46A2Q9BY10 475 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 UBA5Q9GZZ9 404 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 DACT1Q9NYF0 836 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 EIF2B4Q9UI10 523 aaKnown RBP3.6□□□□□ -1.83
HDAC6-212ENST00000461608 ING1Q9UK53 422 aaPredicted RBP3.6□□□□□ -1.83
HDAC6-212ENST00000461608 GTF2A1LQ9UNN4 478 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 AGAP1Q9UPQ3 857 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 MAN2B2Q9Y2E5 1009 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 DGKBQ9Y6T7 804 aa3.6□□□□□ -1.83
HDAC6-212ENST00000461608 PRAMEF33A0A0G2JMD5 474 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 CCDC189A1A4V9 331 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 FAM234BA2RU67 622 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 MYADML2A6NDP7 307 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 IRAK2O43187 625 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 TRIAP1O43715 76 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 PRAMEF10O60809 474 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 FGFR4P22455 802 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 ACRV1P26436 265 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 PDIA3P30101 505 aaKnown RBP3.59□□□□□ -1.83
HDAC6-212ENST00000461608 HIBADHP31937 336 aaKnown RBP3.59□□□□□ -1.83
HDAC6-212ENST00000461608 GCLCP48506 637 aaPredicted RBP3.59□□□□□ -1.83
HDAC6-212ENST00000461608 PTTG1IPP53801 180 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 RPS7P62081 194 aaKnown RBP3.59□□□□□ -1.83
HDAC6-212ENST00000461608 NSUN2Q08J23 767 aaKnown RBP eCLIP3.59□□□□□ -1.83
HDAC6-212ENST00000461608 PRKG1Q13976 671 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 PTK2BQ14289 1009 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 R3HDM1Q15032 1099 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms