RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 OR56A1Q8NGH5 318 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 CYP2W1Q8TAV3 490 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 GCC1Q96CN9 775 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 FAM89AQ96GI7 184 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 MED15Q96RN5 788 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 DCLRE1CQ96SD1 692 aaKnown RBP3.72□□□□□ -1.81
VCL-203ENST00000461383 MNTQ99583 582 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 PRPF18Q99633 342 aaKnown RBP3.72□□□□□ -1.81
VCL-203ENST00000461383 MRPS18AQ9NVS2 196 aaKnown RBP3.72□□□□□ -1.81
VCL-203ENST00000461383 ETAA1Q9NY74 926 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 RGL1Q9NZL6 768 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 PPP4R1LQ9P1A2 415 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 GRHPRQ9UBQ7 328 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 NEU2Q9Y3R4 380 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 DUSP10Q9Y6W6 482 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 AATKQ6ZMQ8 1374 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 A0A1B0GTW7 788 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 DIRC3C9JPN6 131 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 LEFTY2O00292 366 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 SYT5O00445 386 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 ACKR2O00590 384 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 TRIM38O00635 465 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 NPC1O15118 1278 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 IRAK2O43187 625 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 FOXS1O43638 330 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 CCNT2O60583 730 aaKnown RBP3.71□□□□□ -1.82
VCL-203ENST00000461383 SRGAP2O75044 1071 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 COQ9O75208 318 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 PPFIA4O75335 1185 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 KCNA2P16389 499 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 FGFR4P22455 802 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 LRPAP1P30533 357 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 HIBADHP31937 336 aaKnown RBP3.71□□□□□ -1.82
VCL-203ENST00000461383 ATICP31939 592 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 APOBEC3AP31941 199 aaPredicted RBP3.71□□□□□ -1.82
VCL-203ENST00000461383 MAN2A2P49641 1150 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 PPFIA1Q13136 1202 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 PTK2BQ14289 1009 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 RALBP1Q15311 655 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 TAF12Q16514 161 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 ARHGAP15Q53QZ3 475 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 FAXCQ5TGI0 409 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 ANKRD45Q5TZF3 282 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 AGAP9Q5VTM2 703 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 PLAG1Q6DJT9 500 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 CRTC1Q6UUV9 634 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 TMEM108Q6UXF1 575 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 USP49Q70CQ1 688 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 KRT28Q7Z3Y7 464 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 LIMS2Q7Z4I7 341 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 CLNKQ7Z7G1 428 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 SYT12Q8IV01 421 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 FAM71BQ8TC56 605 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 BPIFB1Q8TDL5 484 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 STYXQ8WUJ0 223 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 TBC1D20Q96BZ9 403 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 GRAMD1AQ96CP6 724 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 ZSCAN31Q96LW9 406 aaPredicted RBP3.71□□□□□ -1.82
VCL-203ENST00000461383 ZSWIM1Q9BR11 485 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 MESP1Q9BRJ9 268 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 FAM167BQ9BTA0 163 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 TMEM120AQ9BXJ8 343 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 PCDHAC1Q9H158 963 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 MAGEH1Q9H213 219 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 DHX36Q9H2U1 1008 aaKnown RBP3.71□□□□□ -1.82
VCL-203ENST00000461383 XPNPEP3Q9NQH7 507 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 NECTIN3Q9NQS3 549 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 TRPM5Q9NZQ8 1165 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 ZMYND8Q9ULU4 1186 aaPredicted RBP3.71□□□□□ -1.82
VCL-203ENST00000461383 SORCS3Q9UPU3 1222 aa3.71□□□□□ -1.82
VCL-203ENST00000461383 F5H697 171 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 DCLK1O15075 740 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 RRP9O43818 475 aaKnown RBP3.7□□□□□ -1.82
VCL-203ENST00000461383 RPS6KA4O75676 772 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 SCAF4O95104 1147 aaKnown RBP3.7□□□□□ -1.82
VCL-203ENST00000461383 TNFRSF6BO95407 300 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 HLA-DOAP06340 250 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 DHRS4L1P0CG22 281 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 SRGAP2BP0DMP2 458 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 ACO1P21399 889 aaKnown RBP3.7□□□□□ -1.82
VCL-203ENST00000461383 YY1P25490 414 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 GABRB3P28472 473 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 PRKAR1BP31321 381 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 SERPINF1P36955 418 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 RABGGTBP53611 331 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 FPGSQ05932 587 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 GALNT1Q10472 559 aaPredicted RBP3.7□□□□□ -1.82
VCL-203ENST00000461383 TCF15Q12870 199 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 BOP1Q14137 746 aaKnown RBP3.7□□□□□ -1.82
VCL-203ENST00000461383 E2F2Q14209 437 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 KCNAB1Q14722 419 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 POSTNQ15063 836 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 TAF5Q15542 800 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 SPDYE7PQ495Y7 208 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 TBC1D10BQ4KMP7 808 aaPredicted RBP3.7□□□□□ -1.82
VCL-203ENST00000461383 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.7□□□□□ -1.82
VCL-203ENST00000461383 FAM102AQ5T9C2 384 aaPredicted RBP3.7□□□□□ -1.82
VCL-203ENST00000461383 ARHGAP40Q5TG30 622 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 MRNIPQ6NTE8 343 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 MZT2AQ6P582 158 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms