RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 POMGNT1Q8WZA1 660 aa11.22□□□□□ -0.61
HDLBP-227ENST00000458564 ACDQ96AP0 544 aa11.22□□□□□ -0.61
HDLBP-227ENST00000458564 FUBP3Q96I24 572 aaKnown RBP eCLIP11.22□□□□□ -0.61
HDLBP-227ENST00000458564 P2RY13Q9BPV8 354 aa11.22□□□□□ -0.61
HDLBP-227ENST00000458564 LSM14BQ9BX40 385 aaKnown RBP11.22□□□□□ -0.61
HDLBP-227ENST00000458564 ECT2Q9H8V3 914 aa11.22□□□□□ -0.61
HDLBP-227ENST00000458564 FBRSL1Q9HCM7 1045 aaKnown RBP11.22□□□□□ -0.61
HDLBP-227ENST00000458564 VPS45Q9NRW7 570 aa11.22□□□□□ -0.61
HDLBP-227ENST00000458564 GDAP2Q9NXN4 497 aa11.22□□□□□ -0.61
HDLBP-227ENST00000458564 L1RE1Q9UN81 338 aa11.22□□□□□ -0.61
HDLBP-227ENST00000458564 APBB3O95704 486 aa11.21□□□□□ -0.61
HDLBP-227ENST00000458564 POLR2BP30876 1174 aaKnown RBP11.21□□□□□ -0.61
HDLBP-227ENST00000458564 GPR15P49685 360 aa11.21□□□□□ -0.61
HDLBP-227ENST00000458564 GALK1P51570 392 aa11.21□□□□□ -0.61
HDLBP-227ENST00000458564 WNT7BP56706 349 aa11.21□□□□□ -0.61
HDLBP-227ENST00000458564 ELF2Q15723 593 aa11.21□□□□□ -0.61
HDLBP-227ENST00000458564 CCDC6Q16204 474 aa11.21□□□□□ -0.61
HDLBP-227ENST00000458564 N4BP2L1Q5TBK1 243 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-227ENST00000458564 C1orf127Q8N9H9 656 aa11.21□□□□□ -0.61
HDLBP-227ENST00000458564 CCDC26Q8TAB7 109 aa11.21□□□□□ -0.61
HDLBP-227ENST00000458564 EZH1Q92800 747 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-227ENST00000458564 ATP2A3Q93084 1043 aa11.21□□□□□ -0.61
HDLBP-227ENST00000458564 HHIPQ96QV1 700 aa11.21□□□□□ -0.61
HDLBP-227ENST00000458564 PI4K2AQ9BTU6 479 aa11.21□□□□□ -0.61
HDLBP-227ENST00000458564 DUSP15Q9H1R2 295 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-227ENST00000458564 IKZF4Q9H2S9 585 aa11.21□□□□□ -0.61
HDLBP-227ENST00000458564 DDX43Q9NXZ2 648 aaKnown RBP11.21□□□□□ -0.61
HDLBP-227ENST00000458564 STK17AQ9UEE5 414 aa11.21□□□□□ -0.61
HDLBP-227ENST00000458564 ITGA11Q9UKX5 1188 aa11.21□□□□□ -0.61
HDLBP-227ENST00000458564 MAGED2Q9UNF1 606 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-227ENST00000458564 EXOC7Q9UPT5 735 aa11.21□□□□□ -0.61
HDLBP-227ENST00000458564 EML5Q05BV3 1969 aa11.21□□□□□ -0.62
HDLBP-227ENST00000458564 TCHHQ07283 1943 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 TRAV19A0A0A6YYK7 116 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 GABRDO14764 452 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 HUS1O60921 280 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 ITGB3P05106 788 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 USP17L7P0C7H9 530 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 GAP43P17677 238 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 PFKLP17858 780 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 GARTP22102 1010 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 CYP2F1P24903 491 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 PCSK1P29120 753 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 MAGEA11P43364 429 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 LHX1P48742 406 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 TFAMQ00059 246 aaKnown RBP11.2□□□□□ -0.62
HDLBP-227ENST00000458564 MYL7Q01449 175 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 DMC1Q14565 340 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 SF3A1Q15459 793 aaKnown RBP11.2□□□□□ -0.62
HDLBP-227ENST00000458564 DDR2Q16832 855 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 EML3Q32P44 896 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 L1TD1Q5T7N2 865 aaKnown RBP11.2□□□□□ -0.62
HDLBP-227ENST00000458564 SDHAF4Q5VUM1 108 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 NAIF1Q69YI7 327 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-227ENST00000458564 C11orf74Q86VG3 221 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 TOP6BLQ8N6T0 577 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 KIAA1958Q8N8K9 716 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 STKLD1Q8NE28 680 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 RPLP0P6Q8NHW5 317 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 CACTINQ8WUQ7 758 aaKnown RBP11.2□□□□□ -0.62
HDLBP-227ENST00000458564 CD101Q93033 1021 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 CHAMP1Q96JM3 812 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 CEP295NLQ96MC4 621 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 SLC22A12Q96S37 553 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 FAM213AQ9BRX8 229 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 OLFML3Q9NRN5 406 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 POLR3BQ9NW08 1133 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-227ENST00000458564 DUS2Q9NX74 493 aaKnown RBP11.2□□□□□ -0.62
HDLBP-227ENST00000458564 GCNT4Q9P109 453 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 ARHGAP26Q9UNA1 814 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 AGAP1Q9UPQ3 857 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 ZZEF1O43149 2961 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 WDFY3Q8IZQ1 3526 aa11.2□□□□□ -0.62
HDLBP-227ENST00000458564 BCLAF3A2AJT9 711 aaKnown RBP11.19□□□□□ -0.62
HDLBP-227ENST00000458564 RHOBTB1O94844 696 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 KCNK5O95279 499 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 CD2BP2O95400 341 aaKnown RBP11.19□□□□□ -0.62
HDLBP-227ENST00000458564 LDHAP00338 332 aaKnown RBP11.19□□□□□ -0.62
HDLBP-227ENST00000458564 CKMP06732 381 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 KCNA4P22459 653 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 ACAT1P24752 427 aaKnown RBP11.19□□□□□ -0.62
HDLBP-227ENST00000458564 IFNAR2P48551 515 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 PDE6CP51160 858 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 KCNA1Q09470 495 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 ALCAMQ13740 583 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 RNF43Q68DV7 783 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 TCEAL6Q6IPX3 200 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 FAM171BQ6P995 826 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 LIMS2Q7Z4I7 341 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 ADGRF2Q8IZF7 708 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 FSIP1Q8NA03 581 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 TCEAL3Q969E4 200 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 DNAJC19Q96DA6 116 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 EPSTI1Q96J88 318 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 ACCSQ96QU6 501 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 EDEM2Q9BV94 578 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 SMOC1Q9H4F8 434 aa11.19□□□□□ -0.62
HDLBP-227ENST00000458564 MRPL44Q9H9J2 332 aaKnown RBP11.19□□□□□ -0.62
HDLBP-227ENST00000458564 RBAKQ9NYW8 714 aaPredicted RBP11.19□□□□□ -0.62
HDLBP-227ENST00000458564 SIX4Q9UIU6 781 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms