RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 MXI1P50539 228 aa19.94■□□□□ 0.78
USP39-209ENST00000458268 LRRC63Q05C16 580 aa19.94■□□□□ 0.78
USP39-209ENST00000458268 IFRD2Q12894 506 aaPredicted RBP19.94■□□□□ 0.78
USP39-209ENST00000458268 MORC3Q14149 939 aa19.94■□□□□ 0.78
USP39-209ENST00000458268 LIMS2Q7Z4I7 341 aa19.94■□□□□ 0.78
USP39-209ENST00000458268 ELOA2Q8IYF1 753 aaPredicted RBP19.94■□□□□ 0.78
USP39-209ENST00000458268 FBXL6Q8N531 539 aa19.94■□□□□ 0.78
USP39-209ENST00000458268 DHTKD1Q96HY7 919 aaPredicted RBP19.94■□□□□ 0.78
USP39-209ENST00000458268 MKNK1Q9BUB5 465 aa19.94■□□□□ 0.78
USP39-209ENST00000458268 LRRC3Q9BY71 257 aa19.94■□□□□ 0.78
USP39-209ENST00000458268 PLA2G2FQ9BZM2 168 aa19.94■□□□□ 0.78
USP39-209ENST00000458268 PTPRDP23468 1912 aa19.94■□□□□ 0.78
USP39-209ENST00000458268 CLDN5O00501 218 aa19.93■□□□□ 0.78
USP39-209ENST00000458268 CD58P19256 250 aa19.93■□□□□ 0.78
USP39-209ENST00000458268 BMP6P22004 513 aa19.93■□□□□ 0.78
USP39-209ENST00000458268 ANXA13P27216 316 aa19.93■□□□□ 0.78
USP39-209ENST00000458268 EPHA5P54756 1037 aa19.93■□□□□ 0.78
USP39-209ENST00000458268 NOP14P78316 857 aaKnown RBP19.93■□□□□ 0.78
USP39-209ENST00000458268 GPC5P78333 572 aa19.93■□□□□ 0.78
USP39-209ENST00000458268 MAPRE1Q15691 268 aaKnown RBP19.93■□□□□ 0.78
USP39-209ENST00000458268 COBLL1Q53SF7 1204 aa19.93■□□□□ 0.78
USP39-209ENST00000458268 GAREM2Q75VX8 874 aa19.93■□□□□ 0.78
USP39-209ENST00000458268 MYCBPAPQ8TBZ2 947 aa19.93■□□□□ 0.78
USP39-209ENST00000458268 PCED1BQ96HM7 432 aa19.93■□□□□ 0.78
USP39-209ENST00000458268 ZFP14Q9HCL3 533 aa19.93■□□□□ 0.78
USP39-209ENST00000458268 TMEM8AQ9HCN3 771 aa19.93■□□□□ 0.78
USP39-209ENST00000458268 ABCB6Q9NP58 842 aa19.93■□□□□ 0.78
USP39-209ENST00000458268 OBSL1O75147 1896 aa19.92■□□□□ 0.78
USP39-209ENST00000458268 SLC38A8A6NNN8 435 aa19.92■□□□□ 0.78
USP39-209ENST00000458268 DPYSL4O14531 572 aa19.92■□□□□ 0.78
USP39-209ENST00000458268 SLC16A3O15427 465 aaKnown RBP19.92■□□□□ 0.78
USP39-209ENST00000458268 STX10O60499 249 aa19.92■□□□□ 0.78
USP39-209ENST00000458268 LRRN2O75325 713 aa19.92■□□□□ 0.78
USP39-209ENST00000458268 ASS1P00966 412 aaKnown RBP19.92■□□□□ 0.78
USP39-209ENST00000458268 CSH1P0DML2 217 aa19.92■□□□□ 0.78
USP39-209ENST00000458268 CSH2P0DML3 217 aa19.92■□□□□ 0.78
USP39-209ENST00000458268 CDC25CP30307 473 aa19.92■□□□□ 0.78
USP39-209ENST00000458268 PPP1R2P41236 205 aa19.92■□□□□ 0.78
USP39-209ENST00000458268 VCPP55072 806 aaKnown RBP19.92■□□□□ 0.78
USP39-209ENST00000458268 KRT39Q6A163 491 aa19.92■□□□□ 0.78
USP39-209ENST00000458268 FAM171BQ6P995 826 aa19.92■□□□□ 0.78
USP39-209ENST00000458268 ACOT1Q86TX2 421 aa19.92■□□□□ 0.78
USP39-209ENST00000458268 CREBRFQ8IUR6 639 aa19.92■□□□□ 0.78
USP39-209ENST00000458268 B3GALNT2Q8NCR0 500 aa19.92■□□□□ 0.78
USP39-209ENST00000458268 TAF4BQ92750 862 aa19.92■□□□□ 0.78
USP39-209ENST00000458268 SMARCD2Q92925 531 aa19.92■□□□□ 0.78
USP39-209ENST00000458268 ASB16Q96NS5 453 aa19.92■□□□□ 0.78
USP39-209ENST00000458268 TRPC7Q9HCX4 862 aa19.92■□□□□ 0.78
USP39-209ENST00000458268 HMGXB4Q9UGU5 601 aa19.92■□□□□ 0.78
USP39-209ENST00000458268 ARMCX3Q9UH62 379 aaPredicted RBP19.92■□□□□ 0.78
USP39-209ENST00000458268 TRIOO75962 3097 aa19.91■□□□□ 0.78
USP39-209ENST00000458268 KMT2EQ8IZD2 1858 aa19.91■□□□□ 0.78
USP39-209ENST00000458268 BICDL2A1A5D9 508 aa19.91■□□□□ 0.78
USP39-209ENST00000458268 PPP1R3GB7ZBB8 358 aa19.91■□□□□ 0.78
USP39-209ENST00000458268 FGF19O95750 216 aa19.91■□□□□ 0.78
USP39-209ENST00000458268 NDST1P52848 882 aa19.91■□□□□ 0.78
USP39-209ENST00000458268 PAK1Q13153 545 aa19.91■□□□□ 0.78
USP39-209ENST00000458268 CFAP221Q4G0U5 840 aa19.91■□□□□ 0.78
USP39-209ENST00000458268 FUBP3Q96I24 572 aaKnown RBP eCLIP19.91■□□□□ 0.78
USP39-209ENST00000458268 IPO9Q96P70 1041 aaKnown RBP19.91■□□□□ 0.78
USP39-209ENST00000458268 GBP4Q96PP9 640 aa19.91■□□□□ 0.78
USP39-209ENST00000458268 ZNF518BQ9C0D4 1074 aa19.91■□□□□ 0.78
USP39-209ENST00000458268 SMG9Q9H0W8 520 aaKnown RBP19.91■□□□□ 0.78
USP39-209ENST00000458268 VRTNQ9H8Y1 702 aa19.91■□□□□ 0.78
USP39-209ENST00000458268 FAM49BQ9NUQ9 324 aa19.91■□□□□ 0.78
USP39-209ENST00000458268 KIAA1468Q9P260 1216 aa19.91■□□□□ 0.78
USP39-209ENST00000458268 DENND4CQ5VZ89 1909 aa19.91■□□□□ 0.78
USP39-209ENST00000458268 COL4A3Q01955 1670 aa19.91■□□□□ 0.78
USP39-209ENST00000458268 NUP210Q8TEM1 1887 aaPredicted RBP19.9■□□□□ 0.78
USP39-209ENST00000458268 ECI2O75521 394 aa19.9■□□□□ 0.78
USP39-209ENST00000458268 MICAL2O94851 1124 aa19.9■□□□□ 0.78
USP39-209ENST00000458268 FCARP24071 287 aa19.9■□□□□ 0.78
USP39-209ENST00000458268 ASPAP45381 313 aa19.9■□□□□ 0.78
USP39-209ENST00000458268 YAF2Q8IY57 180 aa19.9■□□□□ 0.78
USP39-209ENST00000458268 FBXL13Q8NEE6 735 aa19.9■□□□□ 0.78
USP39-209ENST00000458268 ELSPBP1Q96BH3 223 aa19.9■□□□□ 0.78
USP39-209ENST00000458268 TNIP3Q96KP6 325 aa19.9■□□□□ 0.78
USP39-209ENST00000458268 B3GNT5Q9BYG0 378 aa19.9■□□□□ 0.78
USP39-209ENST00000458268 NIF3L1Q9GZT8 377 aa19.9■□□□□ 0.78
USP39-209ENST00000458268 CLSTN2Q9H4D0 955 aa19.9■□□□□ 0.78
USP39-209ENST00000458268 BRD9Q9H8M2 597 aa19.9■□□□□ 0.78
USP39-209ENST00000458268 IL21Q9HBE4 155 aa19.9■□□□□ 0.78
USP39-209ENST00000458268 APOBEC3GQ9HC16 384 aaKnown RBP19.9■□□□□ 0.78
USP39-209ENST00000458268 ARHGEF3Q9NR81 526 aa19.9■□□□□ 0.78
USP39-209ENST00000458268 ATP8B3O60423 1300 aa19.9■□□□□ 0.78
USP39-209ENST00000458268 TICRRQ7Z2Z1 1910 aa19.9■□□□□ 0.78
USP39-209ENST00000458268 KRBA1A5PL33 1030 aa19.89■□□□□ 0.77
USP39-209ENST00000458268 F8VP50 259 aa19.89■□□□□ 0.77
USP39-209ENST00000458268 CCDC130P13994 396 aa19.89■□□□□ 0.77
USP39-209ENST00000458268 HMGA1P17096 107 aaKnown RBP19.89■□□□□ 0.77
USP39-209ENST00000458268 ADORA2BP29275 332 aa19.89■□□□□ 0.77
USP39-209ENST00000458268 GDI1P31150 447 aa19.89■□□□□ 0.77
USP39-209ENST00000458268 NLRP12P59046 1061 aa19.89■□□□□ 0.77
USP39-209ENST00000458268 LRMPQ12912 555 aa19.89■□□□□ 0.77
USP39-209ENST00000458268 CBWD6Q4V339 395 aa19.89■□□□□ 0.77
USP39-209ENST00000458268 GREB1Q4ZG55 1949 aa19.89■□□□□ 0.77
USP39-209ENST00000458268 WDR44Q5JSH3 913 aa19.89■□□□□ 0.77
USP39-209ENST00000458268 CBWD3Q5JTY5 395 aa19.89■□□□□ 0.77
USP39-209ENST00000458268 CBWD5Q5RIA9 395 aa19.89■□□□□ 0.77
USP39-209ENST00000458268 VITQ6UXI7 678 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms