RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 TOGARAM2Q6ZUX3 1019 aa2.35□□□□□ -2.03
NEDD1-204ENST00000457368 ANKS3Q6ZW76 656 aa2.35□□□□□ -2.03
NEDD1-204ENST00000457368 HAUS6Q7Z4H7 955 aa2.35□□□□□ -2.03
NEDD1-204ENST00000457368 CATIPQ7Z7H3 387 aa2.35□□□□□ -2.03
NEDD1-204ENST00000457368 PLA2G4DQ86XP0 818 aa2.35□□□□□ -2.03
NEDD1-204ENST00000457368 CKAP2LQ8IYA6 745 aa2.35□□□□□ -2.03
NEDD1-204ENST00000457368 CACTIN-AS1Q8N1I8 211 aa2.35□□□□□ -2.03
NEDD1-204ENST00000457368 TMTC2Q8N394 836 aa2.35□□□□□ -2.03
NEDD1-204ENST00000457368 BAHD1Q8TBE0 780 aaPredicted RBP2.35□□□□□ -2.03
NEDD1-204ENST00000457368 IGDCC4Q8TDY8 1250 aa2.35□□□□□ -2.03
NEDD1-204ENST00000457368 SNRNP27Q8WVK2 155 aaKnown RBP2.35□□□□□ -2.03
NEDD1-204ENST00000457368 LENG9Q96B70 501 aa2.35□□□□□ -2.03
NEDD1-204ENST00000457368 RSPRY1Q96DX4 576 aa2.35□□□□□ -2.03
NEDD1-204ENST00000457368 NUSAP1Q9BXS6 441 aaKnown RBP2.35□□□□□ -2.03
NEDD1-204ENST00000457368 DHX33Q9H6R0 707 aaKnown RBP2.35□□□□□ -2.03
NEDD1-204ENST00000457368 FAM13BQ9NYF5 915 aa2.35□□□□□ -2.03
NEDD1-204ENST00000457368 SUCLA2Q9P2R7 463 aaPredicted RBP2.35□□□□□ -2.03
NEDD1-204ENST00000457368 HSFX1Q9UBD0 423 aa2.35□□□□□ -2.03
NEDD1-204ENST00000457368 NOVA2Q9UNW9 492 aaKnown RBP2.35□□□□□ -2.03
NEDD1-204ENST00000457368 APOBEC2Q9Y235 224 aaKnown RBP2.35□□□□□ -2.03
NEDD1-204ENST00000457368 RAXQ9Y2V3 346 aa2.35□□□□□ -2.03
NEDD1-204ENST00000457368 PCDHGB2Q9Y5G2 931 aa2.35□□□□□ -2.03
NEDD1-204ENST00000457368 PCNX2A6NKB5 2137 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 SPTA1P02549 2419 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 WDR87Q6ZQQ6 2873 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 SPAARA0A1B0GVQ0 90 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 HIP1O00291 1037 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 SYN3O14994 580 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 TSPAN1O60635 241 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 TADA2AO75478 443 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 ABL1P00519 1130 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 SDSP20132 328 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 CD68P34810 354 aaPredicted RBP2.34□□□□□ -2.03
NEDD1-204ENST00000457368 MLH1P40692 756 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 PREPP48147 710 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 PDE1AP54750 535 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 PTENP60484 403 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 GPLD1P80108 840 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 AMPD2Q01433 879 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 CREB5Q02930 508 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 CFHR1Q03591 330 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 SERINC3Q13530 473 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 MAPK6Q16659 721 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 UBE2SQ16763 222 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 ITPRIPL2Q3MIP1 535 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 USP39Q53GS9 565 aaKnown RBP2.34□□□□□ -2.03
NEDD1-204ENST00000457368 COX20Q5RI15 118 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 CYP4A22Q5TCH4 519 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 PKN3Q6P5Z2 889 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 NOTUMQ6P988 496 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 PDZD4Q76G19 769 aaPredicted RBP2.34□□□□□ -2.03
NEDD1-204ENST00000457368 LSRQ86X29 649 aaPredicted RBP2.34□□□□□ -2.03
NEDD1-204ENST00000457368 TMC8Q8IU68 726 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 SRBD1Q8N5C6 995 aaKnown RBP2.34□□□□□ -2.03
NEDD1-204ENST00000457368 CTCFLQ8NI51 663 aaPredicted RBP2.34□□□□□ -2.03
NEDD1-204ENST00000457368 SHKBP1Q8TBC3 707 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 OTUD7AQ8TE49 926 aaPredicted RBP2.34□□□□□ -2.03
NEDD1-204ENST00000457368 FBLIM1Q8WUP2 373 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 HNRNPLLQ8WVV9 542 aaKnown RBP2.34□□□□□ -2.03
NEDD1-204ENST00000457368 ING5Q8WYH8 240 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 SLC5A5Q92911 643 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 TCEAL4Q96EI5 215 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 CHFRQ96EP1 664 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 LRIG1Q96JA1 1093 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 ZSWIM3Q96MP5 696 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 UROC1Q96N76 676 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 PPP1R16BQ96T49 567 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 FAM83CQ9BQN1 747 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 ZDHHC5Q9C0B5 715 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 DISC1Q9NRI5 854 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 PILRBQ9UKJ0 227 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 ASB3Q9Y575 518 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 COL4A3BPQ9Y5P4 624 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 APC2O95996 2303 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 DMDP11532 3685 aa2.34□□□□□ -2.03
NEDD1-204ENST00000457368 MYH6P13533 1939 aa2.34□□□□□ -2.04
NEDD1-204ENST00000457368 KIF26AQ9ULI4 1882 aaPredicted RBP2.34□□□□□ -2.04
NEDD1-204ENST00000457368 A0A1B0GUA9 196 aa2.34□□□□□ -2.04
NEDD1-204ENST00000457368 F8W810 466 aa2.34□□□□□ -2.04
NEDD1-204ENST00000457368 IFIT3O14879 490 aaKnown RBP2.34□□□□□ -2.04
NEDD1-204ENST00000457368 DKC1O60832 514 aaKnown RBP eCLIP2.34□□□□□ -2.04
NEDD1-204ENST00000457368 OPHN1O60890 802 aa2.34□□□□□ -2.04
NEDD1-204ENST00000457368 KIF4AO95239 1232 aa2.34□□□□□ -2.04
NEDD1-204ENST00000457368 LRG1P02750 347 aa2.34□□□□□ -2.04
NEDD1-204ENST00000457368 SERPINF2P08697 491 aa2.34□□□□□ -2.04
NEDD1-204ENST00000457368 FTH1P19P0C7X4 201 aa2.34□□□□□ -2.04
NEDD1-204ENST00000457368 ENGP17813 658 aa2.34□□□□□ -2.04
NEDD1-204ENST00000457368 OR1D2P34982 312 aa2.34□□□□□ -2.04
NEDD1-204ENST00000457368 P2RY2P41231 377 aa2.34□□□□□ -2.04
NEDD1-204ENST00000457368 LIFRP42702 1097 aa2.34□□□□□ -2.04
NEDD1-204ENST00000457368 ABCG1P45844 678 aa2.34□□□□□ -2.04
NEDD1-204ENST00000457368 MCM2P49736 904 aa2.34□□□□□ -2.04
NEDD1-204ENST00000457368 CSRP3P50461 194 aa2.34□□□□□ -2.04
NEDD1-204ENST00000457368 USP11P51784 963 aa2.34□□□□□ -2.04
NEDD1-204ENST00000457368 KPNA1P52294 538 aaPredicted RBP2.34□□□□□ -2.04
NEDD1-204ENST00000457368 GP2P55259 537 aaKnown RBP2.34□□□□□ -2.04
NEDD1-204ENST00000457368 ROR1Q01973 937 aa2.34□□□□□ -2.04
NEDD1-204ENST00000457368 RHDQ02161 417 aa2.34□□□□□ -2.04
NEDD1-204ENST00000457368 GRSF1Q12849 480 aaKnown RBP eCLIP2.34□□□□□ -2.04
NEDD1-204ENST00000457368 PLD1Q13393 1074 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms