RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 XYLT2Q9H1B5 865 aa17.33■□□□□ 0.37
CPSF6-203ENST00000456847 TRPV4Q9HBA0 871 aa17.33■□□□□ 0.37
CPSF6-203ENST00000456847 IL21Q9HBE4 155 aa17.33■□□□□ 0.37
CPSF6-203ENST00000456847 CRTAC1Q9NQ79 661 aa17.33■□□□□ 0.37
CPSF6-203ENST00000456847 CIZ1Q9ULV3 898 aaPredicted RBP17.33■□□□□ 0.37
CPSF6-203ENST00000456847 A8MXQ7 604 aa17.33■□□□□ 0.36
CPSF6-203ENST00000456847 MAPK13O15264 365 aa17.33■□□□□ 0.36
CPSF6-203ENST00000456847 CLDN10P78369 228 aa17.33■□□□□ 0.36
CPSF6-203ENST00000456847 ARID3BQ8IVW6 561 aaPredicted RBP17.33■□□□□ 0.36
CPSF6-203ENST00000456847 DNASE1L2Q92874 299 aa17.33■□□□□ 0.36
CPSF6-203ENST00000456847 IRF7Q92985 503 aa17.33■□□□□ 0.36
CPSF6-203ENST00000456847 IRF2BPLQ9H1B7 796 aa17.33■□□□□ 0.36
CPSF6-203ENST00000456847 TASP1Q9H6P5 420 aa17.33■□□□□ 0.36
CPSF6-203ENST00000456847 SMYD3Q9H7B4 428 aa17.33■□□□□ 0.36
CPSF6-203ENST00000456847 MMRN2Q9H8L6 949 aa17.33■□□□□ 0.36
CPSF6-203ENST00000456847 UXTQ9UBK9 157 aaPredicted RBP17.33■□□□□ 0.36
CPSF6-203ENST00000456847 SLC38A8A6NNN8 435 aa17.32■□□□□ 0.36
CPSF6-203ENST00000456847 ZNF263O14978 683 aa17.32■□□□□ 0.36
CPSF6-203ENST00000456847 KINO60870 393 aaKnown RBP17.32■□□□□ 0.36
CPSF6-203ENST00000456847 P4HA1P13674 534 aa17.32■□□□□ 0.36
CPSF6-203ENST00000456847 ANXA13P27216 316 aa17.32■□□□□ 0.36
CPSF6-203ENST00000456847 PSMC2P35998 433 aaKnown RBP17.32■□□□□ 0.36
CPSF6-203ENST00000456847 RAP1GAPP47736 663 aa17.32■□□□□ 0.36
CPSF6-203ENST00000456847 STARD6P59095 220 aa17.32■□□□□ 0.36
CPSF6-203ENST00000456847 ADAM9Q13443 819 aa17.32■□□□□ 0.36
CPSF6-203ENST00000456847 UBXN2BQ14CS0 331 aa17.32■□□□□ 0.36
CPSF6-203ENST00000456847 INTS8Q75QN2 995 aaKnown RBP17.32■□□□□ 0.36
CPSF6-203ENST00000456847 CCDC105Q8IYK2 499 aa17.32■□□□□ 0.36
CPSF6-203ENST00000456847 ATOH1Q92858 354 aaPredicted RBP17.32■□□□□ 0.36
CPSF6-203ENST00000456847 ERCC4Q92889 916 aaPredicted RBP17.32■□□□□ 0.36
CPSF6-203ENST00000456847 ELMO3Q96BJ8 720 aa17.32■□□□□ 0.36
CPSF6-203ENST00000456847 TIGD1Q96MW7 591 aa17.32■□□□□ 0.36
CPSF6-203ENST00000456847 GSDMAQ96QA5 445 aa17.32■□□□□ 0.36
CPSF6-203ENST00000456847 HEBP1Q9NRV9 189 aa17.32■□□□□ 0.36
CPSF6-203ENST00000456847 SIT1Q9Y3P8 196 aa17.32■□□□□ 0.36
CPSF6-203ENST00000456847 NCANO14594 1321 aa17.32■□□□□ 0.36
CPSF6-203ENST00000456847 COL4A2P08572 1712 aa17.32■□□□□ 0.36
CPSF6-203ENST00000456847 KANSL1LA0AUZ9 987 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 H0Y858 1186 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 AKAP3O75969 853 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 VNN1O95497 513 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 DCNP07585 359 aaKnown RBP17.31■□□□□ 0.36
CPSF6-203ENST00000456847 FAM163BP0C2L3 166 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 TRIM49P0CI25 452 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 TRIM49CP0CI26 452 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 HMGA1P17096 107 aaKnown RBP17.31■□□□□ 0.36
CPSF6-203ENST00000456847 BDNFP23560 247 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 GRIK1P39086 918 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 MAGEA11P43364 429 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 NLRP12P59046 1061 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 ZACNQ401N2 412 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 ZNF658Q5TYW1 1059 aaPredicted RBP17.31■□□□□ 0.36
CPSF6-203ENST00000456847 MFSD6LQ8IWD5 586 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 DTWD2Q8NBA8 298 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 PJA1Q8NG27 643 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 MYCBPAPQ8TBZ2 947 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 MRPS31Q92665 395 aaKnown RBP17.31■□□□□ 0.36
CPSF6-203ENST00000456847 PCED1BQ96HM7 432 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 TSG101Q99816 390 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 MKNK1Q9BUB5 465 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 VRTNQ9H8Y1 702 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 FAM86C1Q9NVL1 165 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 GREB1Q4ZG55 1949 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 IKBKBO14920 756 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 NOL4O94818 638 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 SGSM1Q2NKQ1 1148 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 EDRF1Q3B7T1 1238 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 VSTM1Q6UX27 236 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 SV2AQ7L0J3 742 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 RSPRY1Q96DX4 576 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 IMPG2Q9BZV3 1241 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 DPEP3Q9H4B8 488 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 ZMYM5Q9UJ78 669 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 NME7Q9Y5B8 376 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 PCDHA5Q9Y5H7 936 aa17.31■□□□□ 0.36
CPSF6-203ENST00000456847 HLA-DRAP01903 254 aa17.3■□□□□ 0.36
CPSF6-203ENST00000456847 EPB41P11171 864 aaKnown RBP17.3■□□□□ 0.36
CPSF6-203ENST00000456847 PTPN1P18031 435 aaKnown RBP17.3■□□□□ 0.36
CPSF6-203ENST00000456847 PRCPP42785 496 aa17.3■□□□□ 0.36
CPSF6-203ENST00000456847 CDH8P55286 799 aa17.3■□□□□ 0.36
CPSF6-203ENST00000456847 ZCWPW2Q504Y3 356 aa17.3■□□□□ 0.36
CPSF6-203ENST00000456847 B3GALNT2Q8NCR0 500 aa17.3■□□□□ 0.36
CPSF6-203ENST00000456847 CSGALNACT1Q8TDX6 532 aa17.3■□□□□ 0.36
CPSF6-203ENST00000456847 TRIM66O15016 1216 aa17.29■□□□□ 0.36
CPSF6-203ENST00000456847 CETN3O15182 167 aa17.29■□□□□ 0.36
CPSF6-203ENST00000456847 PRAMEF12O95522 483 aa17.29■□□□□ 0.36
CPSF6-203ENST00000456847 F11P03951 625 aa17.29■□□□□ 0.36
CPSF6-203ENST00000456847 CD72P21854 359 aa17.29■□□□□ 0.36
CPSF6-203ENST00000456847 DDX6P26196 483 aaKnown RBP eCLIP17.29■□□□□ 0.36
CPSF6-203ENST00000456847 AVPR1AP37288 418 aa17.29■□□□□ 0.36
CPSF6-203ENST00000456847 GCLMP48507 274 aa17.29■□□□□ 0.36
CPSF6-203ENST00000456847 C1orf220Q5T0J3 134 aa17.29■□□□□ 0.36
CPSF6-203ENST00000456847 MAB21L3Q8N8X9 362 aa17.29■□□□□ 0.36
CPSF6-203ENST00000456847 TAF4BQ92750 862 aa17.29■□□□□ 0.36
CPSF6-203ENST00000456847 TRMT2BQ96GJ1 504 aaKnown RBP17.29■□□□□ 0.36
CPSF6-203ENST00000456847 GTPBP4Q9BZE4 634 aaKnown RBP17.29■□□□□ 0.36
CPSF6-203ENST00000456847 SMG9Q9H0W8 520 aaKnown RBP17.29■□□□□ 0.36
CPSF6-203ENST00000456847 TRPC7Q9HCX4 862 aa17.29■□□□□ 0.36
CPSF6-203ENST00000456847 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.29■□□□□ 0.369e-7■■■■■ 39.5
CPSF6-203ENST00000456847 ATP8B3O60423 1300 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms