RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 EEF1DP3Q658K8 133 aa21.11■□□□□ 0.97
CSPG5-203ENST00000456150 EFCAB12Q6NXP0 572 aa21.11■□□□□ 0.97
CSPG5-203ENST00000456150 FGD4Q96M96 766 aa21.11■□□□□ 0.97
CSPG5-203ENST00000456150 TMEM121Q9BTD3 319 aa21.11■□□□□ 0.97
CSPG5-203ENST00000456150 PHACTR1Q9C0D0 580 aa21.11■□□□□ 0.97
CSPG5-203ENST00000456150 MLXIPLQ9NP71 852 aa21.11■□□□□ 0.97
CSPG5-203ENST00000456150 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.11■□□□□ 0.97
CSPG5-203ENST00000456150 SENP1Q9P0U3 644 aa21.11■□□□□ 0.97
CSPG5-203ENST00000456150 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.11■□□□□ 0.97
CSPG5-203ENST00000456150 FAM47DPA6NHR8 397 aa21.11■□□□□ 0.97
CSPG5-203ENST00000456150 FOXO6A8MYZ6 492 aa21.11■□□□□ 0.97
CSPG5-203ENST00000456150 ALOX15BO15296 676 aa21.11■□□□□ 0.97
CSPG5-203ENST00000456150 LRCH4O75427 683 aa21.11■□□□□ 0.97
CSPG5-203ENST00000456150 GH1P01241 217 aa21.11■□□□□ 0.97
CSPG5-203ENST00000456150 CXCL8P10145 99 aa21.11■□□□□ 0.97
CSPG5-203ENST00000456150 IL9RQ01113 521 aa21.11■□□□□ 0.97
CSPG5-203ENST00000456150 SPATA21Q7Z572 469 aa21.11■□□□□ 0.97
CSPG5-203ENST00000456150 GBP7Q8N8V2 638 aaPredicted RBP21.11■□□□□ 0.97
CSPG5-203ENST00000456150 CEP120Q8N960 986 aa21.11■□□□□ 0.97
CSPG5-203ENST00000456150 NFKBIZQ9BYH8 718 aa21.11■□□□□ 0.97
CSPG5-203ENST00000456150 SYNCQ9H7C4 482 aa21.11■□□□□ 0.97
CSPG5-203ENST00000456150 ZWILCHQ9H900 591 aa21.11■□□□□ 0.97
CSPG5-203ENST00000456150 PRMT7Q9NVM4 692 aaPredicted RBP21.11■□□□□ 0.97
CSPG5-203ENST00000456150 IFNB1P01574 187 aa21.1■□□□□ 0.97
CSPG5-203ENST00000456150 RAP1GAPP47736 663 aa21.1■□□□□ 0.97
CSPG5-203ENST00000456150 RAD23BP54727 409 aa21.1■□□□□ 0.97
CSPG5-203ENST00000456150 SF3A3Q12874 501 aaKnown RBP eCLIP21.1■□□□□ 0.97
CSPG5-203ENST00000456150 ZNF268Q14587 947 aaPredicted RBP21.1■□□□□ 0.97
CSPG5-203ENST00000456150 KCTD2Q14681 263 aa21.1■□□□□ 0.97
CSPG5-203ENST00000456150 SWT1Q5T5J6 900 aaKnown RBP21.1■□□□□ 0.97
CSPG5-203ENST00000456150 BBS12Q6ZW61 710 aa21.1■□□□□ 0.97
CSPG5-203ENST00000456150 TRABD2AQ86V40 505 aa21.1■□□□□ 0.97
CSPG5-203ENST00000456150 TRAPPC12Q8WVT3 735 aa21.1■□□□□ 0.97
CSPG5-203ENST00000456150 PRCCQ92733 491 aaPredicted RBP21.1■□□□□ 0.97
CSPG5-203ENST00000456150 GRAMD1AQ96CP6 724 aa21.1■□□□□ 0.97
CSPG5-203ENST00000456150 SLC10A4Q96EP9 437 aa21.1■□□□□ 0.97
CSPG5-203ENST00000456150 VPS37BQ9H9H4 285 aa21.1■□□□□ 0.97
CSPG5-203ENST00000456150 ARL2BPQ9Y2Y0 163 aa21.1■□□□□ 0.97
CSPG5-203ENST00000456150 ZSWIM8A7E2V4 1837 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 CLCN3P51790 818 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 TNFAIP2Q03169 654 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 TAZQ16635 292 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 TMEM63BQ5T3F8 832 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 CCDC62Q6P9F0 684 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 PARP9Q8IXQ6 854 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 JOSD2Q8TAC2 188 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 MMP19Q99542 508 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 ABCF3Q9NUQ8 709 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 CYTH4Q9UIA0 394 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 SIX4Q9UIU6 781 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 EVPLQ92817 2033 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 DNAJC25-GNG10A0A024R161 153 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 GJB1P08034 283 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 KDELR1P24390 212 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 GCAP28676 217 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 PHKA2P46019 1235 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 GTF2A1P52655 376 aaPredicted RBP21.09■□□□□ 0.97
CSPG5-203ENST00000456150 OTUD4Q01804 1114 aaKnown RBP21.09■□□□□ 0.97
CSPG5-203ENST00000456150 ACAP1Q15027 740 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 RASA2Q15283 850 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 XYLT1Q86Y38 959 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 FBXO16Q8IX29 292 aaPredicted RBP21.09■□□□□ 0.97
CSPG5-203ENST00000456150 ZBED8Q8IZ13 594 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 C1orf127Q8N9H9 656 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 ACTL9Q8TC94 416 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 ZNF668Q96K58 619 aaPredicted RBP21.09■□□□□ 0.97
CSPG5-203ENST00000456150 METTL5Q9NRN9 209 aaKnown RBP21.09■□□□□ 0.97
CSPG5-203ENST00000456150 SLC24A2Q9UI40 661 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 MCM3APO60318 1980 aa21.09■□□□□ 0.97
CSPG5-203ENST00000456150 CFAP73A6NFT4 308 aa21.08■□□□□ 0.97
CSPG5-203ENST00000456150 POC1B-GALNT4F8VUJ3 575 aa21.08■□□□□ 0.97
CSPG5-203ENST00000456150 CHUKO15111 745 aa21.08■□□□□ 0.97
CSPG5-203ENST00000456150 PRPF4O43172 522 aaKnown RBP eCLIP21.08■□□□□ 0.97
CSPG5-203ENST00000456150 CST8O60676 142 aa21.08■□□□□ 0.97
CSPG5-203ENST00000456150 ATICP31939 592 aa21.08■□□□□ 0.97
CSPG5-203ENST00000456150 SLC18A1P54219 525 aa21.08■□□□□ 0.97
CSPG5-203ENST00000456150 PTPN11Q06124 597 aaPredicted RBP21.08■□□□□ 0.97
CSPG5-203ENST00000456150 PDIA2Q13087 525 aaKnown RBP21.08■□□□□ 0.97
CSPG5-203ENST00000456150 FASTKD3Q14CZ7 662 aaKnown RBP21.08■□□□□ 0.97
CSPG5-203ENST00000456150 SNCBQ16143 134 aa21.08■□□□□ 0.97
CSPG5-203ENST00000456150 HIF1AQ16665 826 aa21.08■□□□□ 0.97
CSPG5-203ENST00000456150 SMTNL2Q2TAL5 461 aa21.08■□□□□ 0.97
CSPG5-203ENST00000456150 CDR2LQ86X02 465 aaPredicted RBP21.08■□□□□ 0.97
CSPG5-203ENST00000456150 PPIL6Q8IXY8 311 aa21.08■□□□□ 0.97
CSPG5-203ENST00000456150 CPXM1Q96SM3 734 aa21.08■□□□□ 0.97
CSPG5-203ENST00000456150 CYP3A43Q9HB55 503 aa21.08■□□□□ 0.97
CSPG5-203ENST00000456150 SMG5Q9UPR3 1016 aaKnown RBP21.08■□□□□ 0.97
CSPG5-203ENST00000456150 FARP1Q9Y4F1 1045 aaPredicted RBP21.08■□□□□ 0.97
CSPG5-203ENST00000456150 LOC102724159A0A0B4J2E5 919 aa21.08■□□□□ 0.96
CSPG5-203ENST00000456150 CELF2O95319 508 aaKnown RBP21.08■□□□□ 0.96
CSPG5-203ENST00000456150 NFICP08651 508 aa21.08■□□□□ 0.96
CSPG5-203ENST00000456150 TXNP10599 105 aaKnown RBP21.08■□□□□ 0.96
CSPG5-203ENST00000456150 MCF2P10911 925 aa21.08■□□□□ 0.96
CSPG5-203ENST00000456150 P4HA1P13674 534 aa21.08■□□□□ 0.96
CSPG5-203ENST00000456150 DYNLT1P63172 113 aa21.08■□□□□ 0.96
CSPG5-203ENST00000456150 POU5F1BQ06416 359 aa21.08■□□□□ 0.96
CSPG5-203ENST00000456150 MYO1EQ12965 1108 aa21.08■□□□□ 0.96
CSPG5-203ENST00000456150 PWP2Q15269 919 aaKnown RBP21.08■□□□□ 0.96
CSPG5-203ENST00000456150 FAM187BQ17R55 369 aa21.08■□□□□ 0.96
CSPG5-203ENST00000456150 ARFGAP1Q8N6T3 406 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms