RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 ABCB11O95342 1321 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 PTPRDP23468 1912 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 WDR27A2RRH5 827 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 F8W810 466 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 FAM229AH3BQW9 127 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 CHADO15335 359 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 ADAM11O75078 769 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 MOSPD3O75425 235 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 RHOP08100 348 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 SNHG28P0DPA3 235 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 KLRC1P26715 233 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 CCR2P41597 374 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 ATXN3P54252 364 aaPredicted RBP5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 TMPRSS3P57727 454 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 IGFBP7Q16270 282 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 CCDC96Q2M329 555 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 UVSSAQ2YD98 709 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 LINC00303Q3SY05 128 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 ANKRD34AQ69YU3 496 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 TMPRSS12Q86WS5 348 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 SRRM1Q8IYB3 904 aaKnown RBP5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 SMG8Q8ND04 991 aaKnown RBP5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 CEP76Q8TAP6 659 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 SEPT1Q8WYJ6 367 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 SMARCD2Q92925 531 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 LPPQ93052 612 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 TCEAL4Q96EI5 215 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 HIC2Q96JB3 615 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 CLSTN3Q9BQT9 956 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 TMEM175Q9BSA9 504 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 CEP41Q9BYV8 373 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 AKTIPQ9H8T0 292 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 GTSE1Q9NYZ3 720 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 FAN1Q9Y2M0 1017 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 CUBNO60494 3623 aa5.97□□□□□ -1.45
SBDSP1-204ENST00000453858 F8W735 103 aaPredicted RBP5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 DDX3YO15523 660 aaKnown RBP5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 ADAM12O43184 909 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 ZNF623O75123 536 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 PAGE1O75459 146 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 CFIP05156 583 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 PDHBP11177 359 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 ZSCAN20P17040 1043 aaPredicted RBP5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 ITGB5P18084 799 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 KPNA1P52294 538 aaPredicted RBP5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 UCNP55089 124 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 SP4Q02446 784 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 ZNF543Q08ER8 600 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 UBE3CQ15386 1083 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 C2orf27AQ580R0 203 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 PPM1LQ5SGD2 360 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 XP32Q5T750 250 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 KIAA1614Q5VZ46 1190 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 ACAD11Q709F0 780 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 TRIM42Q8IWZ5 723 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 ZNF654Q8IZM8 581 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 PHC3Q8NDX5 983 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 SSH1Q8WYL5 1049 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 KCNB2Q92953 911 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 TMEM209Q96SK2 561 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 APOL6Q9BWW8 343 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 TMPRSS13Q9BYE2 586 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 GPR62Q9BZJ7 368 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 MIR1-1HGQ9H1L0 117 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 CPVLQ9H3G5 476 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 ZNF287Q9HBT7 754 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 EPB41L4AQ9HCS5 686 aaPredicted RBP5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 RAD18Q9NS91 495 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 SNTG2Q9NY99 539 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 MAP3K20Q9NYL2 800 aaKnown RBP5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 EVPLQ92817 2033 aa5.96□□□□□ -1.46
SBDSP1-204ENST00000453858 WIPF3A6NGB9 483 aa5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 HEPACAM2A8MVW5 462 aa5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 GOLIM4O00461 696 aa5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 TRDMT1O14717 391 aaKnown RBP5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 FIBPO43427 364 aa5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 BRINP1O60477 761 aa5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 KCNA2P16389 499 aa5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 CCND2P30279 289 aa5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 DCTP40126 519 aa5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 P2RY2P41231 377 aa5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 DPP6P42658 865 aa5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 DGKEP52429 567 aa5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 LONRF3Q496Y0 759 aa5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 RRP12Q5JTH9 1297 aaKnown RBP5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 GLB1LQ6UWU2 654 aa5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 LPCAT2Q7L5N7 544 aa5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 ZC3H18Q86VM9 953 aaKnown RBP5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 NT5DC4Q86YG4 428 aa5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 COLGALT2Q8IYK4 626 aa5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 TTC8Q8TAM2 541 aa5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 CSGALNACT1Q8TDX6 532 aa5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 EZH1Q92800 747 aaPredicted RBP5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 SPATA32Q96LK8 384 aa5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 GAD1Q99259 594 aa5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 SEMA3CQ99985 751 aa5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 TMEM47Q9BQJ4 181 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms