RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 LRCH4O75427 683 aa12.41□□□□□ -0.42
VTA1-203ENST00000452973 RECQL4O94761 1208 aa12.41□□□□□ -0.42
VTA1-203ENST00000452973 TJP3O95049 919 aa12.41□□□□□ -0.42
VTA1-203ENST00000452973 F2P00734 622 aa12.41□□□□□ -0.42
VTA1-203ENST00000452973 IL1R2P27930 398 aa12.41□□□□□ -0.42
VTA1-203ENST00000452973 CCNG2Q16589 344 aa12.41□□□□□ -0.42
VTA1-203ENST00000452973 HP1BP3Q5SSJ5 553 aaPredicted RBP12.41□□□□□ -0.42
VTA1-203ENST00000452973 NOTUMQ6P988 496 aa12.41□□□□□ -0.42
VTA1-203ENST00000452973 EPS8L3Q8TE67 593 aaKnown RBP12.41□□□□□ -0.42
VTA1-203ENST00000452973 PIWIL1Q96J94 861 aaKnown RBP12.41□□□□□ -0.42
VTA1-203ENST00000452973 NT5C1AQ9BXI3 368 aa12.41□□□□□ -0.42
VTA1-203ENST00000452973 AP5M1Q9H0R1 490 aa12.41□□□□□ -0.42
VTA1-203ENST00000452973 LHX5Q9H2C1 402 aa12.41□□□□□ -0.42
VTA1-203ENST00000452973 PPANQ9NQ55 473 aaKnown RBP12.41□□□□□ -0.42
VTA1-203ENST00000452973 CALCOCO1Q9P1Z2 691 aa12.41□□□□□ -0.42
VTA1-203ENST00000452973 E5RJQ4 531 aa12.41□□□□□ -0.42
VTA1-203ENST00000452973 ZNF865P0CJ78 1059 aaPredicted RBP12.41□□□□□ -0.42
VTA1-203ENST00000452973 MAN1A1P33908 653 aa12.41□□□□□ -0.42
VTA1-203ENST00000452973 GPD2P43304 727 aa12.41□□□□□ -0.42
VTA1-203ENST00000452973 RAB6CQ53S08 254 aa12.41□□□□□ -0.42
VTA1-203ENST00000452973 MORN1Q5T089 497 aa12.41□□□□□ -0.42
VTA1-203ENST00000452973 KDM7AQ6ZMT4 941 aa12.41□□□□□ -0.42
VTA1-203ENST00000452973 B4GALNT4Q76KP1 1039 aa12.41□□□□□ -0.42
VTA1-203ENST00000452973 ARFGAP1Q8N6T3 406 aa12.41□□□□□ -0.42
VTA1-203ENST00000452973 RAB6CQ9H0N0 254 aa12.41□□□□□ -0.42
VTA1-203ENST00000452973 RNF39Q9H2S5 420 aa12.41□□□□□ -0.42
VTA1-203ENST00000452973 CITO14578 2027 aa12.41□□□□□ -0.42
VTA1-203ENST00000452973 TNPO2O14787 897 aaKnown RBP12.4□□□□□ -0.42
VTA1-203ENST00000452973 TP73O15350 636 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 EIF3HO15372 352 aaKnown RBP eCLIP12.4□□□□□ -0.42
VTA1-203ENST00000452973 CD48P09326 243 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 VDRP11473 427 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 DARSP14868 501 aaKnown RBP12.4□□□□□ -0.42
VTA1-203ENST00000452973 CYP3A5P20815 502 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 GBP1P32455 592 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 CCT5P48643 541 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 PSEN2P49810 448 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 SEC24CP53992 1094 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 TAP1Q03518 808 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 BYSLQ13895 437 aaKnown RBP12.4□□□□□ -0.42
VTA1-203ENST00000452973 KYAT1Q16773 422 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 GOLGA7BQ2TAP0 167 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 P3H1Q32P28 736 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 TFDP3Q5H9I0 405 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 PPP1R26Q5T8A7 1209 aaPredicted RBP12.4□□□□□ -0.42
VTA1-203ENST00000452973 TMEM121Q9BTD3 319 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 CALN1Q9BXU9 219 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 CDC42EP4Q9H3Q1 356 aaKnown RBP12.4□□□□□ -0.42
VTA1-203ENST00000452973 CYP3A43Q9HB55 503 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 GRIN2DO15399 1336 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 TRIP12Q14669 1992 aaPredicted RBP12.4□□□□□ -0.42
VTA1-203ENST00000452973 RIPK2O43353 540 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 SHOX2O60902 331 aaPredicted RBP12.4□□□□□ -0.42
VTA1-203ENST00000452973 C6orf222P0C671 652 aaPredicted RBP12.4□□□□□ -0.42
VTA1-203ENST00000452973 HOXD8P13378 290 aaPredicted RBP12.4□□□□□ -0.42
VTA1-203ENST00000452973 ATP11AP98196 1134 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 PTK6Q13882 451 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 SLMAPQ14BN4 828 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 CNGA2Q16280 664 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 KYNUQ16719 465 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 C15orf59Q2T9L4 293 aaPredicted RBP12.4□□□□□ -0.42
VTA1-203ENST00000452973 DCAF4L1Q3SXM0 396 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 IZUMO3Q5VZ72 239 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 MIS12Q9H081 205 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 SCN1AP35498 2009 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 SGK1O00141 431 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 RNF8O76064 485 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 ITIH2P19823 946 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 IVDP26440 423 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 SKOR1P84550 965 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 LONRF1Q17RB8 773 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 CCDC38Q502W7 563 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 SCYL2Q6P3W7 929 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 KCTD6Q8NC69 237 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 MDM1Q8TC05 714 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 IPO4Q8TEX9 1081 aaKnown RBP12.4□□□□□ -0.42
VTA1-203ENST00000452973 HOMER3Q9NSC5 361 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 CWC15Q9P013 229 aaKnown RBP12.4□□□□□ -0.42
VTA1-203ENST00000452973 WHRNQ9P202 907 aa12.4□□□□□ -0.42
VTA1-203ENST00000452973 LIASO43766 372 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 CST8O60676 142 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 IVLP07476 585 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 RARGP13631 454 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 LSP1P33241 339 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 CDKN2BP42772 138 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 EIF3BP55884 814 aaKnown RBP12.39□□□□□ -0.43
VTA1-203ENST00000452973 IFI35P80217 286 aaPredicted RBP12.39□□□□□ -0.43
VTA1-203ENST00000452973 MTM1Q13496 603 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 SNX17Q15036 470 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 HADHQ16836 314 aaKnown RBP12.39□□□□□ -0.43
VTA1-203ENST00000452973 RASAL3Q86YV0 1011 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 SCUBE3Q8IX30 993 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 BEST2Q8NFU1 509 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 SNX27Q96L92 541 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 SELENOSQ9BQE4 189 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 DPEP3Q9H4B8 488 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 AAASQ9NRG9 546 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 GJD2Q9UKL4 321 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 hCG_1818297A0A087WSY0 165 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 SMIM35A0A1B0GVV1 85 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms