RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 MAML2Q8IZL2 1156 aaPredicted RBP13.8□□□□□ -0.2
CHD3-206ENST00000452447 CMTM8Q8IZV2 173 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 MAB21L3Q8N8X9 362 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 BPIFB1Q8TDL5 484 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 MRPS31Q92665 395 aaKnown RBP13.8□□□□□ -0.2
CHD3-206ENST00000452447 PAGE5Q96GU1 130 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 MSANTD3Q96H12 275 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 FUBP3Q96I24 572 aaKnown RBP eCLIP13.8□□□□□ -0.2
CHD3-206ENST00000452447 PKMYT1Q99640 499 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 SYT15Q9BQS2 421 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 SLC46A2Q9BY10 475 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 C8orf33Q9H7E9 229 aaPredicted RBP13.8□□□□□ -0.2
CHD3-206ENST00000452447 UXTQ9UBK9 157 aaPredicted RBP13.8□□□□□ -0.2
CHD3-206ENST00000452447 CDH9Q9ULB4 789 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 ZNF292O60281 2723 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 OBSL1O75147 1896 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 COL4A2P08572 1712 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 KIF26AQ9ULI4 1882 aaPredicted RBP13.79□□□□□ -0.2
CHD3-206ENST00000452447 HCRTO43612 131 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 PHACTR2O75167 634 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 PRAMEF12O95522 483 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 CST3P01034 146 aaPredicted RBP13.79□□□□□ -0.2
CHD3-206ENST00000452447 F11P03951 625 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 MYL1P05976 194 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 PDGFRBP09619 1106 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 LMO2P25791 158 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 TNNC1P63316 161 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 FZD5Q13467 585 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 WDR72Q3MJ13 1102 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 FAM171BQ6P995 826 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 ADSSL1Q8N142 457 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 STKLD1Q8NE28 680 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 KBTBD7Q8WVZ9 684 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 ZFYVE19Q96K21 471 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 LRRC3BQ96PB8 259 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 SMG9Q9H0W8 520 aaKnown RBP13.79□□□□□ -0.2
CHD3-206ENST00000452447 SNX25Q9H3E2 840 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 LMAN1LQ9HAT1 526 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 MAGEC2Q9UBF1 373 aaPredicted RBP13.79□□□□□ -0.2
CHD3-206ENST00000452447 GPR179Q6PRD1 2367 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 ATG2BQ96BY7 2078 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 SLC38A8A6NNN8 435 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 SOBPA7XYQ1 873 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 KLRC4O43908 158 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 ATP2C2O75185 946 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 CLSTN1O94985 981 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 WARSP23381 471 aaKnown RBP13.79□□□□□ -0.2
CHD3-206ENST00000452447 GNL1P36915 607 aaPredicted RBP13.79□□□□□ -0.2
CHD3-206ENST00000452447 SYKP43405 635 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 PSMC1P62191 440 aaKnown RBP13.79□□□□□ -0.2
CHD3-206ENST00000452447 STK4Q13043 487 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 MTAPQ13126 283 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 PPP2R5DQ14738 602 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 KMT5BQ4FZB7 885 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 TXNDC8Q6A555 127 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 LIMS2Q7Z4I7 341 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 TMEM150AQ86TG1 271 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 RALGPS2Q86X27 583 aaPredicted RBP13.79□□□□□ -0.2
CHD3-206ENST00000452447 KIAA0895Q8NCT3 520 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 ATRIPQ8WXE1 791 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 IER2Q9BTL4 223 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 SCAND2PQ9GZW5 306 aaPredicted RBP13.79□□□□□ -0.2
CHD3-206ENST00000452447 GTSE1Q9NYZ3 720 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 ZDHHC9Q9Y397 364 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 PTPRDP23468 1912 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 GREB1Q4ZG55 1949 aa13.79□□□□□ -0.2
CHD3-206ENST00000452447 ANAPC1Q9H1A4 1944 aa13.78□□□□□ -0.2
CHD3-206ENST00000452447 KINO60870 393 aaKnown RBP13.78□□□□□ -0.2
CHD3-206ENST00000452447 NOL4O94818 638 aa13.78□□□□□ -0.2
CHD3-206ENST00000452447 GRIK1P39086 918 aa13.78□□□□□ -0.2
CHD3-206ENST00000452447 MAGEA11P43364 429 aa13.78□□□□□ -0.2
CHD3-206ENST00000452447 SOX9P48436 509 aa13.78□□□□□ -0.2
CHD3-206ENST00000452447 CYP27A1Q02318 531 aa13.78□□□□□ -0.2
CHD3-206ENST00000452447 BIRC3Q13489 604 aa13.78□□□□□ -0.2
CHD3-206ENST00000452447 CCDC142Q17RM4 750 aa13.78□□□□□ -0.2
CHD3-206ENST00000452447 VSTM1Q6UX27 236 aa13.78□□□□□ -0.2
CHD3-206ENST00000452447 MON1AQ86VX9 555 aa13.78□□□□□ -0.2
CHD3-206ENST00000452447 ZNF687Q8N1G0 1237 aa13.78□□□□□ -0.2
CHD3-206ENST00000452447 FSIP1Q8NA03 581 aa13.78□□□□□ -0.2
CHD3-206ENST00000452447 OR6B3Q8NGW1 331 aa13.78□□□□□ -0.2
CHD3-206ENST00000452447 TTC8Q8TAM2 541 aa13.78□□□□□ -0.2
CHD3-206ENST00000452447 MYLPFQ96A32 169 aa13.78□□□□□ -0.2
CHD3-206ENST00000452447 CCDC47Q96A33 483 aaKnown RBP13.78□□□□□ -0.2
CHD3-206ENST00000452447 SYAP1Q96A49 352 aaPredicted RBP13.78□□□□□ -0.2
CHD3-206ENST00000452447 TRMT2BQ96GJ1 504 aaKnown RBP13.78□□□□□ -0.2
CHD3-206ENST00000452447 CHAMP1Q96JM3 812 aa13.78□□□□□ -0.2
CHD3-206ENST00000452447 HINFPQ9BQA5 517 aa13.78□□□□□ -0.2
CHD3-206ENST00000452447 CHRDQ9H2X0 955 aa13.78□□□□□ -0.2
CHD3-206ENST00000452447 KIF9Q9HAQ2 790 aa13.78□□□□□ -0.2
CHD3-206ENST00000452447 TDP1Q9NUW8 608 aa13.78□□□□□ -0.2
CHD3-206ENST00000452447 HPSEQ9Y251 543 aa13.78□□□□□ -0.2
CHD3-206ENST00000452447 MYH10P35580 1976 aa13.77□□□□□ -0.2
CHD3-206ENST00000452447 SPECC1L-ADORA2AF8WAN1 911 aa13.77□□□□□ -0.21
CHD3-206ENST00000452447 TACC1O75410 805 aa13.77□□□□□ -0.21
CHD3-206ENST00000452447 KIF20AO95235 890 aa13.77□□□□□ -0.21
CHD3-206ENST00000452447 FAM163BP0C2L3 166 aa13.77□□□□□ -0.21
CHD3-206ENST00000452447 BDNFP23560 247 aa13.77□□□□□ -0.21
CHD3-206ENST00000452447 ANXA13P27216 316 aa13.77□□□□□ -0.21
CHD3-206ENST00000452447 ATICP31939 592 aa13.77□□□□□ -0.21
CHD3-206ENST00000452447 AP3M2P53677 418 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms