RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 ZNF263O14978 683 aa19.17■□□□□ 0.66
CTNS-204ENST00000452111 LRRN2O75325 713 aa19.17■□□□□ 0.66
CTNS-204ENST00000452111 AKAP3O75969 853 aa19.17■□□□□ 0.66
CTNS-204ENST00000452111 CSH1P0DML2 217 aa19.17■□□□□ 0.66
CTNS-204ENST00000452111 CSH2P0DML3 217 aa19.17■□□□□ 0.66
CTNS-204ENST00000452111 HOXD11P31277 338 aaPredicted RBP19.17■□□□□ 0.66
CTNS-204ENST00000452111 CYP27A1Q02318 531 aa19.17■□□□□ 0.66
CTNS-204ENST00000452111 FAM160A1Q05DH4 1040 aa19.17■□□□□ 0.66
CTNS-204ENST00000452111 MAPRE1Q15691 268 aaKnown RBP19.17■□□□□ 0.66
CTNS-204ENST00000452111 MDH1BQ5I0G3 518 aa19.17■□□□□ 0.66
CTNS-204ENST00000452111 SCARA5Q6ZMJ2 495 aa19.17■□□□□ 0.66
CTNS-204ENST00000452111 MFSD6LQ8IWD5 586 aa19.17■□□□□ 0.66
CTNS-204ENST00000452111 YAF2Q8IY57 180 aa19.17■□□□□ 0.66
CTNS-204ENST00000452111 ENGASEQ8NFI3 743 aa19.17■□□□□ 0.66
CTNS-204ENST00000452111 DNASE1L2Q92874 299 aa19.17■□□□□ 0.66
CTNS-204ENST00000452111 ERCC4Q92889 916 aaPredicted RBP19.17■□□□□ 0.66
CTNS-204ENST00000452111 IRF7Q92985 503 aa19.17■□□□□ 0.66
CTNS-204ENST00000452111 E2F7Q96AV8 911 aa19.17■□□□□ 0.66
CTNS-204ENST00000452111 DDX23Q9BUQ8 820 aaKnown RBP19.17■□□□□ 0.66
CTNS-204ENST00000452111 IRF2BPLQ9H1B7 796 aa19.17■□□□□ 0.66
CTNS-204ENST00000452111 SMYD3Q9H7B4 428 aa19.17■□□□□ 0.66
CTNS-204ENST00000452111 MAGEC2Q9UBF1 373 aaPredicted RBP19.17■□□□□ 0.66
CTNS-204ENST00000452111 SLC38A8A6NNN8 435 aa19.16■□□□□ 0.66
CTNS-204ENST00000452111 VNN1O95497 513 aa19.16■□□□□ 0.66
CTNS-204ENST00000452111 PRAMEF12O95522 483 aa19.16■□□□□ 0.66
CTNS-204ENST00000452111 BDNFP23560 247 aa19.16■□□□□ 0.66
CTNS-204ENST00000452111 RAP1GAPP47736 663 aa19.16■□□□□ 0.66
CTNS-204ENST00000452111 NLRP12P59046 1061 aa19.16■□□□□ 0.66
CTNS-204ENST00000452111 NFIL3Q16649 462 aa19.16■□□□□ 0.66
CTNS-204ENST00000452111 ZNF667Q5HYK9 610 aa19.16■□□□□ 0.66
CTNS-204ENST00000452111 TMEM150AQ86TG1 271 aa19.16■□□□□ 0.66
CTNS-204ENST00000452111 TMC2Q8TDI7 906 aa19.16■□□□□ 0.66
CTNS-204ENST00000452111 PCED1BQ96HM7 432 aa19.16■□□□□ 0.66
CTNS-204ENST00000452111 SLC46A2Q9BY10 475 aa19.16■□□□□ 0.66
CTNS-204ENST00000452111 SMG9Q9H0W8 520 aaKnown RBP19.16■□□□□ 0.66
CTNS-204ENST00000452111 DPEP3Q9H4B8 488 aa19.16■□□□□ 0.66
CTNS-204ENST00000452111 RMND1Q9NWS8 449 aa19.16■□□□□ 0.66
CTNS-204ENST00000452111 MTF2Q9Y483 593 aaPredicted RBP19.16■□□□□ 0.66
CTNS-204ENST00000452111 A8MXQ7 604 aa19.15■□□□□ 0.66
CTNS-204ENST00000452111 NOL4O94818 638 aa19.15■□□□□ 0.66
CTNS-204ENST00000452111 F11P03951 625 aa19.15■□□□□ 0.66
CTNS-204ENST00000452111 TRIM49P0CI25 452 aa19.15■□□□□ 0.66
CTNS-204ENST00000452111 TRIM49CP0CI26 452 aa19.15■□□□□ 0.66
CTNS-204ENST00000452111 GLULP15104 373 aa19.15■□□□□ 0.66
CTNS-204ENST00000452111 RPL13P26373 211 aaKnown RBP19.15■□□□□ 0.66
CTNS-204ENST00000452111 MAGEA11P43364 429 aa19.15■□□□□ 0.66
CTNS-204ENST00000452111 MRE11P49959 708 aa19.15■□□□□ 0.66
CTNS-204ENST00000452111 VAMP7P51809 220 aa19.15■□□□□ 0.66
CTNS-204ENST00000452111 CDH8P55286 799 aa19.15■□□□□ 0.66
CTNS-204ENST00000452111 ANGPT1Q15389 498 aa19.15■□□□□ 0.66
CTNS-204ENST00000452111 ZACNQ401N2 412 aa19.15■□□□□ 0.66
CTNS-204ENST00000452111 C1orf220Q5T0J3 134 aa19.15■□□□□ 0.66
CTNS-204ENST00000452111 SV2AQ7L0J3 742 aa19.15■□□□□ 0.66
CTNS-204ENST00000452111 FAM186BQ8IYM0 893 aa19.15■□□□□ 0.66
CTNS-204ENST00000452111 MYCBPAPQ8TBZ2 947 aa19.15■□□□□ 0.66
CTNS-204ENST00000452111 LRRC3BQ96PB8 259 aa19.15■□□□□ 0.66
CTNS-204ENST00000452111 VRTNQ9H8Y1 702 aa19.15■□□□□ 0.66
CTNS-204ENST00000452111 LTB4R2Q9NPC1 389 aa19.15■□□□□ 0.66
CTNS-204ENST00000452111 DLGAP2Q9P1A6 1054 aa19.15■□□□□ 0.66
CTNS-204ENST00000452111 PIEZO1Q92508 2521 aa19.14■□□□□ 0.65
CTNS-204ENST00000452111 FAM170BA6NMN3 283 aa19.14■□□□□ 0.65
CTNS-204ENST00000452111 MAPK13O15264 365 aa19.14■□□□□ 0.65
CTNS-204ENST00000452111 TADA3O75528 432 aa19.14■□□□□ 0.65
CTNS-204ENST00000452111 FAM163BP0C2L3 166 aa19.14■□□□□ 0.65
CTNS-204ENST00000452111 KRT13P13646 458 aa19.14■□□□□ 0.65
CTNS-204ENST00000452111 PTPN1P18031 435 aaKnown RBP19.14■□□□□ 0.65
CTNS-204ENST00000452111 GRIK1P39086 918 aa19.14■□□□□ 0.65
CTNS-204ENST00000452111 PIK3CAP42336 1068 aa19.14■□□□□ 0.65
CTNS-204ENST00000452111 ADAM9Q13443 819 aa19.14■□□□□ 0.65
CTNS-204ENST00000452111 ZCWPW2Q504Y3 356 aa19.14■□□□□ 0.65
CTNS-204ENST00000452111 TXNDC8Q6A555 127 aa19.14■□□□□ 0.65
CTNS-204ENST00000452111 VSTM1Q6UX27 236 aa19.14■□□□□ 0.65
CTNS-204ENST00000452111 ZNF852Q6ZMS4 543 aa19.14■□□□□ 0.65
CTNS-204ENST00000452111 INTS8Q75QN2 995 aaKnown RBP19.14■□□□□ 0.65
CTNS-204ENST00000452111 MAB21L3Q8N8X9 362 aa19.14■□□□□ 0.65
CTNS-204ENST00000452111 MRPS31Q92665 395 aaKnown RBP19.14■□□□□ 0.65
CTNS-204ENST00000452111 EEF2KMTQ96G04 330 aa19.14■□□□□ 0.65
CTNS-204ENST00000452111 MMRN2Q9H8L6 949 aa19.14■□□□□ 0.65
CTNS-204ENST00000452111 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.14■□□□□ 0.653e-13■■■■■ 511.3
CTNS-204ENST00000452111 UXTQ9UBK9 157 aaPredicted RBP19.14■□□□□ 0.65
CTNS-204ENST00000452111 ARNTLO00327 626 aa19.13■□□□□ 0.65
CTNS-204ENST00000452111 IKBKBO14920 756 aa19.13■□□□□ 0.65
CTNS-204ENST00000452111 SMC2O95347 1197 aa19.13■□□□□ 0.65
CTNS-204ENST00000452111 TARSP26639 723 aaKnown RBP19.13■□□□□ 0.65
CTNS-204ENST00000452111 PSMC2P35998 433 aaKnown RBP19.13■□□□□ 0.65
CTNS-204ENST00000452111 AVPR1AP37288 418 aa19.13■□□□□ 0.65
CTNS-204ENST00000452111 GCLMP48507 274 aa19.13■□□□□ 0.65
CTNS-204ENST00000452111 FCHO2Q0JRZ9 810 aa19.13■□□□□ 0.65
CTNS-204ENST00000452111 SPOPLQ6IQ16 392 aa19.13■□□□□ 0.65
CTNS-204ENST00000452111 CMTM8Q8IZV2 173 aa19.13■□□□□ 0.65
CTNS-204ENST00000452111 B3GALNT2Q8NCR0 500 aa19.13■□□□□ 0.65
CTNS-204ENST00000452111 CSGALNACT1Q8TDX6 532 aa19.13■□□□□ 0.65
CTNS-204ENST00000452111 SMARCE1Q969G3 411 aa19.13■□□□□ 0.65
CTNS-204ENST00000452111 TRMT2BQ96GJ1 504 aaKnown RBP19.13■□□□□ 0.65
CTNS-204ENST00000452111 ZFYVE19Q96K21 471 aa19.13■□□□□ 0.65
CTNS-204ENST00000452111 GSDMAQ96QA5 445 aa19.13■□□□□ 0.65
CTNS-204ENST00000452111 SDCBP2Q9H190 292 aa19.13■□□□□ 0.65
CTNS-204ENST00000452111 TRPC7Q9HCX4 862 aa19.13■□□□□ 0.65
CTNS-204ENST00000452111 TRPV5Q9NQA5 729 aa19.13■□□□□ 0.65
CTNS-204ENST00000452111 PCDHA5Q9Y5H7 936 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms