RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 NOL4O94818 638 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 MYL1P05976 194 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 CSH1P0DML2 217 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 CSH2P0DML3 217 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 WARSP23381 471 aaKnown RBP13.36□□□□□ -0.27
CPSF4-208ENST00000452047 PSMC1P62191 440 aaKnown RBP13.36□□□□□ -0.27
CPSF4-208ENST00000452047 RPL10AP62906 217 aaKnown RBP13.36□□□□□ -0.27
CPSF4-208ENST00000452047 PSMD2Q13200 908 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 TAF12Q16514 161 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 DDR2Q16832 855 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 GOLGA5Q8TBA6 731 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 PLEKHO2Q8TD55 490 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 TRMT2BQ96GJ1 504 aaKnown RBP13.36□□□□□ -0.27
CPSF4-208ENST00000452047 MYRFLQ96LU7 910 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 SYT15Q9BQS2 421 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 XYLT2Q9H1B5 865 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 KCTD10Q9H3F6 313 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 CRTAC1Q9NQ79 661 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 EXOC1Q9NV70 894 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 DMAC2Q9NW81 257 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 ZMYM5Q9UJ78 669 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 FBXO4Q9UKT5 387 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 CDH9Q9ULB4 789 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 NDRG2Q9UN36 371 aaKnown RBP13.36□□□□□ -0.27
CPSF4-208ENST00000452047 NME7Q9Y5B8 376 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 DNAH14Q0VDD8 3507 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 OTOGLQ3ZCN5 2332 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 HELZP42694 1942 aaKnown RBP13.35□□□□□ -0.27
CPSF4-208ENST00000452047 SLC38A8A6NNN8 435 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 DPYSL4O14531 572 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 LAMTOR5O43504 91 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 EXOC3O60645 756 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 TACC1O75410 805 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 STAU1O95793 577 aaKnown RBP13.35□□□□□ -0.27
CPSF4-208ENST00000452047 DDX6P26196 483 aaKnown RBP eCLIP13.35□□□□□ -0.27
CPSF4-208ENST00000452047 MAGEA11P43364 429 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 SYKP43405 635 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 CASP4P49662 377 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 NDUFA8P51970 172 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 CLDN10P78369 228 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 ZNF528Q3MIS6 628 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 ARHGAP29Q52LW3 1261 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 C4orf50Q6ZRC1 276 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 SPATA2LQ8IUW3 424 aaPredicted RBP13.35□□□□□ -0.27
CPSF4-208ENST00000452047 SLC9A9Q8IVB4 645 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 YAF2Q8IY57 180 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 CMTM8Q8IZV2 173 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 BPIFB1Q8TDL5 484 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 CSGALNACT1Q8TDX6 532 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 PARD3BQ8TEW8 1205 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 FAM3CQ92520 227 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 MYLPFQ96A32 169 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 MSANTD3Q96H12 275 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 ZFYVE19Q96K21 471 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 MRPL45Q9BRJ2 306 aaKnown RBP13.35□□□□□ -0.27
CPSF4-208ENST00000452047 SMG9Q9H0W8 520 aaKnown RBP13.35□□□□□ -0.27
CPSF4-208ENST00000452047 CHRDQ9H2X0 955 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 SEMA4AQ9H3S1 761 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 PRMT8Q9NR22 394 aaPredicted RBP13.35□□□□□ -0.27
CPSF4-208ENST00000452047 MAGED2Q9UNF1 606 aaPredicted RBP13.35□□□□□ -0.27
CPSF4-208ENST00000452047 CCL26Q9Y258 94 aa13.35□□□□□ -0.27
CPSF4-208ENST00000452047 EP300Q09472 2414 aaPredicted RBP13.35□□□□□ -0.27
CPSF4-208ENST00000452047 SOBPA7XYQ1 873 aa13.34□□□□□ -0.27
CPSF4-208ENST00000452047 PRR29P0C7W0 189 aa13.34□□□□□ -0.27
CPSF4-208ENST00000452047 CCNE1P24864 410 aa13.34□□□□□ -0.27
CPSF4-208ENST00000452047 CTHP32929 405 aa13.34□□□□□ -0.27
CPSF4-208ENST00000452047 SOX9P48436 509 aa13.34□□□□□ -0.27
CPSF4-208ENST00000452047 MYL6P60660 151 aa13.34□□□□□ -0.27
CPSF4-208ENST00000452047 MTAPQ13126 283 aa13.34□□□□□ -0.27
CPSF4-208ENST00000452047 WDR72Q3MJ13 1102 aa13.34□□□□□ -0.27
CPSF4-208ENST00000452047 WDR44Q5JSH3 913 aa13.34□□□□□ -0.27
CPSF4-208ENST00000452047 TDRD10Q5VZ19 366 aaKnown RBP13.34□□□□□ -0.27
CPSF4-208ENST00000452047 TXNDC8Q6A555 127 aa13.34□□□□□ -0.27
CPSF4-208ENST00000452047 ZC3H14Q6PJT7 736 aaKnown RBP13.34□□□□□ -0.27
CPSF4-208ENST00000452047 TXNDC11Q6PKC3 985 aa13.34□□□□□ -0.27
CPSF4-208ENST00000452047 CELF5Q8N6W0 485 aaKnown RBP13.34□□□□□ -0.27
CPSF4-208ENST00000452047 MAB21L3Q8N8X9 362 aa13.34□□□□□ -0.27
CPSF4-208ENST00000452047 RIN3Q8TB24 985 aa13.34□□□□□ -0.27
CPSF4-208ENST00000452047 USP13Q92995 863 aaPredicted RBP13.34□□□□□ -0.27
CPSF4-208ENST00000452047 MMS19Q96T76 1030 aa13.34□□□□□ -0.27
CPSF4-208ENST00000452047 SCAND2PQ9GZW5 306 aaPredicted RBP13.34□□□□□ -0.27
CPSF4-208ENST00000452047 GOLPH3LQ9H4A5 285 aa13.34□□□□□ -0.27
CPSF4-208ENST00000452047 C8orf33Q9H7E9 229 aaPredicted RBP13.34□□□□□ -0.27
CPSF4-208ENST00000452047 VRTNQ9H8Y1 702 aa13.34□□□□□ -0.27
CPSF4-208ENST00000452047 GTSE1Q9NYZ3 720 aa13.34□□□□□ -0.27
CPSF4-208ENST00000452047 UXTQ9UBK9 157 aaPredicted RBP13.34□□□□□ -0.27
CPSF4-208ENST00000452047 ATP6V1DQ9Y5K8 247 aa13.34□□□□□ -0.27
CPSF4-208ENST00000452047 A0A1W2PQ27 194 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 A0A1W2PQ64 194 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 A0A1W2PQD8 194 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 LRRIQ3A6PVS8 624 aaPredicted RBP13.33□□□□□ -0.28
CPSF4-208ENST00000452047 SPECC1L-ADORA2AF8WAN1 911 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 PDXKO00764 312 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 RHOBTB3O94955 611 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 RPN1P04843 607 aaKnown RBP13.33□□□□□ -0.28
CPSF4-208ENST00000452047 PDGFRBP09619 1106 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 FAM163BP0C2L3 166 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 CHRNB1P11230 501 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 ATICP31939 592 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 AVPR1AP37288 418 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms