RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 EEF2KMTQ96G04 330 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 PCED1BQ96HM7 432 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 FUBP3Q96I24 572 aaKnown RBP eCLIP13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 SMG9Q9H0W8 520 aaKnown RBP13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 SDCBP2Q9H190 292 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 SNX25Q9H3E2 840 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 DPEP3Q9H4B8 488 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 TASP1Q9H6P5 420 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 SMYD3Q9H7B4 428 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 HEBP1Q9NRV9 189 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 FRMD4BQ9Y2L6 1034 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 PCDHA5Q9Y5H7 936 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 COL4A3Q01955 1670 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 DMDP11532 3685 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 KANSL1LA0AUZ9 987 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 SLC38A8A6NNN8 435 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 ARNTLO00327 626 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 IKBKBO14920 756 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 MAPK13O15264 365 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 NOL4O94818 638 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 PRAMEF12O95522 483 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 TRIM49P0CI25 452 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 TRIM49CP0CI26 452 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 PTPN1P18031 435 aaKnown RBP13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 BDNFP23560 247 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 CDC25CP30307 473 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 GDI1P31150 447 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 HOXD11P31277 338 aaPredicted RBP13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 PRCPP42785 496 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 MAGEA11P43364 429 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 RAP1GAPP47736 663 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 VAMP7P51809 220 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 MCCD1P59942 119 aaPredicted RBP13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 PRKCQQ04759 706 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 PPP3CAQ08209 521 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 ZNF699Q32M78 642 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 MDH1BQ5I0G3 518 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 SCN4BQ8IWT1 228 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 DTWD2Q8NBA8 298 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 SHDQ96IW2 340 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 TIGD1Q96MW7 591 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 BRD9Q9H8M2 597 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 TMEM30AQ9NV96 361 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 FAM86C1Q9NVL1 165 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 MAGEC2Q9UBF1 373 aaPredicted RBP13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 MAGED2Q9UNF1 606 aaPredicted RBP13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 SIT1Q9Y3P8 196 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 TCHHQ07283 1943 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 KMT2EQ8IZD2 1858 aa13.19□□□□□ -0.3
CSNK1E-211ENST00000451964 A8MXQ7 604 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 TADA3O75528 432 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 CSH1P0DML2 217 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 CSH2P0DML3 217 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 RFX1P22670 979 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 RPL13P26373 211 aaKnown RBP13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 WEE1P30291 646 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 GCLMP48507 274 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 CACNA2D1P54289 1103 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 CYP27A1Q02318 531 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 FCHO2Q0JRZ9 810 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 SGSM1Q2NKQ1 1148 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 ARHGAP15Q53QZ3 475 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 ZNF667Q5HYK9 610 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 ZNF658Q5TYW1 1059 aaPredicted RBP13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 TXNDC8Q6A555 127 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 SPOPLQ6IQ16 392 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 C4orf50Q6ZRC1 276 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 TPRG1Q6ZUI0 275 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 FAM186BQ8IYM0 893 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 PJA1Q8NG27 643 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 DEPDC1BQ8WUY9 529 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 DNASE1L2Q92874 299 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 IRF7Q92985 503 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 E2F7Q96AV8 911 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 CCDC34Q96HJ3 373 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 MYRFLQ96LU7 910 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 GSDMAQ96QA5 445 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 TRPV5Q9NQA5 729 aa13.18□□□□□ -0.3
CSNK1E-211ENST00000451964 ZFHX2Q9C0A1 2572 aaPredicted RBP13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 FAM170BA6NMN3 283 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 CLDN5O00501 218 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 ZNF263O14978 683 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 ASS1P00966 412 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 HLA-DRAP01903 254 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 PSMC2P35998 433 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 PMS1P54277 932 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 USP46P62068 366 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 FZD5Q13467 585 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 MAPRE1Q15691 268 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 EDRF1Q3B7T1 1238 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 COBLL1Q53SF7 1204 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 ISM2Q6H9L7 571 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 VSTM1Q6UX27 236 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 SCARA5Q6ZMJ2 495 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 INTS8Q75QN2 995 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 ALYREFQ86V81 257 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 MON1AQ86VX9 555 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 CMTM8Q8IZV2 173 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 ZNF687Q8N1G0 1237 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 MAB21L3Q8N8X9 362 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms