RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 CALCAP01258 141 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 EPCAMP16422 314 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 TYMPP19971 482 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 PSMC1P62191 440 aaKnown RBP10.5□□□□□ -0.73
CCDC171-203ENST00000449575 DLX2Q07687 328 aaPredicted RBP10.5□□□□□ -0.73
CCDC171-203ENST00000449575 ANKS3Q6ZW76 656 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 TOP6BLQ8N6T0 577 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 GPATCH11Q8N954 259 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 PGLYRP2Q96PD5 576 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 PARD6BQ9BYG5 372 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 BCO2Q9BYV7 579 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 XPO4Q9C0E2 1151 aaKnown RBP10.5□□□□□ -0.73
CCDC171-203ENST00000449575 CRISPLD1Q9H336 500 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 NSUN3Q9H649 340 aaKnown RBP10.5□□□□□ -0.73
CCDC171-203ENST00000449575 TLE6Q9H808 572 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 RXFP1Q9HBX9 757 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 GREB1Q4ZG55 1949 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 NOTCH4Q99466 2003 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 ZNF638Q14966 1978 aaKnown RBP10.49□□□□□ -0.73
CCDC171-203ENST00000449575 EPHB6O15197 1021 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 ROR1Q01973 937 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 EXOC3L4Q17RC7 722 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 TTC9BQ8N6N2 239 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 OR6B3Q8NGW1 331 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 KREMEN1Q96MU8 473 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 NIF3L1Q9GZT8 377 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 IFNKQ9P0W0 207 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 HCFC2Q9Y5Z7 792 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 TRIOO75962 3097 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 P4HA2O15460 535 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 TGM5O43548 720 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 N4BP1O75113 896 aaKnown RBP10.49□□□□□ -0.73
CCDC171-203ENST00000449575 TUBBP07437 444 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 KLRC2P26717 231 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 CLCN4P51793 760 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 GSCP56915 257 aaPredicted RBP10.49□□□□□ -0.73
CCDC171-203ENST00000449575 KCNC3Q14003 757 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 DUSP6Q16828 381 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 ZNF394Q53GI3 561 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 HSP90B2PQ58FF3 399 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 RNF19BQ6ZMZ0 732 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 PPM1KQ8N3J5 372 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 WHAMMQ8TF30 809 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 RHOBTB2Q9BYZ6 727 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 IMPG2Q9BZV3 1241 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 PRDM6Q9NQX0 595 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 LMCD1Q9NZU5 365 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 VPS18Q9P253 973 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 CDH22Q9UJ99 828 aa10.49□□□□□ -0.73
CCDC171-203ENST00000449575 A0A087WUV0 522 aaPredicted RBP10.48□□□□□ -0.73
CCDC171-203ENST00000449575 MYBPHLA2RUH7 354 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 LGALS16A8MUM7 142 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 NDST1P52848 882 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 FANCCQ00597 558 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 WDR44Q5JSH3 913 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 SLC8B1Q6J4K2 584 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 ZNF280DQ6N043 979 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 GBP6Q6ZN66 633 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 GPIHBP1Q8IV16 184 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 TAF4BQ92750 862 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 CRTAC1Q9NQ79 661 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 GTF3C4Q9UKN8 822 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 STXBP5LQ9Y2K9 1186 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 BACE2Q9Y5Z0 518 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 MRFAP1Q9Y605 127 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 ARHGAP6O43182 974 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 TACC1O75410 805 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 SOAT2O75908 522 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 WARSP23381 471 aaKnown RBP10.48□□□□□ -0.73
CCDC171-203ENST00000449575 GNL1P36915 607 aaPredicted RBP10.48□□□□□ -0.73
CCDC171-203ENST00000449575 LTBRP36941 435 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 UBXN1Q04323 297 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 CUL2Q13617 745 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 TUBB2AQ13885 445 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 SLC39A12Q504Y0 691 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 LILRA6Q6PI73 481 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 DPH6Q7L8W6 267 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 C12orf29Q8N999 325 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 ATAD1Q8NBU5 361 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 SLC22A17Q8WUG5 538 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 NT5C1BQ96P26 610 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 PKMYT1Q99640 499 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 TUBB2BQ9BVA1 445 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 UBE2TQ9NPD8 197 aaPredicted RBP10.48□□□□□ -0.73
CCDC171-203ENST00000449575 CISHQ9NSE2 258 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 DONSONQ9NYP3 566 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 FNIP2Q9P278 1114 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 BARX2Q9UMQ3 279 aaPredicted RBP10.48□□□□□ -0.73
CCDC171-203ENST00000449575 SIK3Q9Y2K2 1263 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 MUC3AQ02505 3323 aa10.48□□□□□ -0.73
CCDC171-203ENST00000449575 A0A1B0GTH6 734 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 A8MXQ7 604 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 H3BQF6 201 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 RNF225M0QZC1 329 aaPredicted RBP10.47□□□□□ -0.73
CCDC171-203ENST00000449575 TBX10O75333 385 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 NOL4O94818 638 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 SEC24AO95486 1093 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 SERPINC1P01008 464 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 CPB1P15086 417 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 NDUFV1P49821 464 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms